BAC Information

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BAC

Clone NameB6Ng01-119G05
Chromosome1 (Build37)
Map Location 32,264,197 - 32,374,138
singlet/doubletdoublet
Overlap geneKhdrbs2
Upstream gene4931428L18Rik, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056, LOC100041238
Downstream geneEG408191, EG633498, LOC213711, LOC100040828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119G05.bB6Ng01-119G05.g
ACCDH923614DH923615
length1,1371,076
definitionDH923614|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G05, 5' end.DH923615|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,264,197 - 32,265,355)(32,373,051 - 32,374,138)
sequence
gaattctaagtttactattttgaactagccctgcgaatacaagctcctct
ctggcaagaggtgtttgataactaactgtcaacactggggcatttcatct
gaatgagtaacattcttacgaaattccaagctcagggtcagctcacggac
tgcctaggacattggtgaagtccagacagtagagttcaacctgatgtagg
tatttgtaaaatcatgtcttggaggcacctataataaaataatactgaaa
gaaagcacacagattcatacaccaactaatgcagggacaggtttggagca
ttcgtgccaaggttccaggagactaagattctgtgaaactctttgtctcg
ggtctgggtccaagcctttaggcctgtcattcagacttcactggagtggg
tgtgtcagttgaggaaatagttcagtgttttaaaaggaaccattgattga
ccctacaatgtcttttgtatctccatggttgagtttgtaagatgatgttg
ttgttgctgctgttgtaacagtgtccctaggactatttctgtttatgatc
tgacgtaactcagaagcatttttctctaacttgactccagaacagattac
tacagctaaacagaagatcattaagaggcagcatgtgggtaagtggaaca
tctaaacacacaggcatttaaaaaggtgtcctttccactgtcttagccat
ttaaagaatggtgttgttatagaaatctaccgtagattcagccattactt
acaatgcccttcaccctgttggattatcctctgagagaaagtcagctgct
ttcattgacaggttttgaagctgaggatagattatcatcaccaaaaatga
aattgggggagatattttgtgttgcaaaatttaagcacacacttacacct
gatctacaaattagtaaatttatctaattaatttaaattatccatgattt
tgcataccttctctctctttttttttctgactcaaaaaaattatagaaaa
ctagtatagagaacaatataattatgctgtctcttaattattttagacac
tgacaataaaatagagctaaaattcatgtacgtaaactggggaatttgtt
tatgaaattttttctatctagaaattctttggcacta
gaattctttaaatgtagaattaagcaatgaaacctaaaatcccatactct
gattggtgtcttaacatgaaaatcaaaactaagaacagtgtatttttgtc
acaggaaactaatttacagtgggagaaaatggaagtaattagaggatatt
agatactagagatgaagtgcttcttgatatttgagtcaccttcgccaaca
ttcttggggccttaatttatcctctattccttctgaatatgaataaagat
tttcttgaaatatgtgaggtccctgagataacatctattaattctaatgt
aagctgaattgatattatttgcaatcaacaaaatgtggaaaaatacagat
tcaacagcatcaattaattattcagacccctgcattttctaccttttgat
agcttcataccatcaaatttctttgttatactgggaaagtaggaatagat
acaatgaagagaaatgcccaaatattaaattaaccatggaataaatgcca
tgacaaataggatgcatttttcattcttacatgtcgagaaaacataaacc
aaatgtattctaatttctatgtggttatgttgttccactcagagggatct
taagtgtcactggctaaggaagaccatgaatgcttaatgtccttacttgg
tatatattagcataatgctttgctaatgggatgggtgatgggggaaaaca
tgaaaaaatgagggtttagtgtctacatctaccaaagtcattgttctgtc
tttgtttcccaagaggatgctgcatataaaaaccaaagatattatttttt
aaagattattcaatgatactgaaggtgtgagctatacggctccatcaaag
atagtaacaaaaaggttccctgttcctaggtgacataaaaaatgaaggag
tcagttcagagaaaacatcacaacactgctctggggatgctggatatagg
cagccccagggagatcagcatttcctcaaggaacgatagagagcaaggga
attctgagaagtgcctgattggattctccttgaacataaagaggtcagtg
caaaaaaataatatagtaatgattaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32264197_32265355
seq2: B6Ng01-119G05.b_45_1181

seq1  GAATTCTAAGTTTACTATTTTGAACTAGCCCTGCGAATACAAGCTCCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTTTACTATTTTGAACTAGCCCTGCGAATACAAGCTCCTCT  50

seq1  CTGGCAAGAGGTGTTTGATAACTAACTGTCAACACTGGGGCATTTCATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAGAGGTGTTTGATAACTAACTGTCAACACTGGGGCATTTCATCT  100

seq1  GAATGAGTAACATTCTTACGAAATTCCAAGCTCAGGGTCAGCTCACGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTAACATTCTTACGAAATTCCAAGCTCAGGGTCAGCTCACGGAC  150

seq1  TGCCTAGGACATTGGTGAAGTCCAGACAGTAGAGTTCAACCTGATGTAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGGACATTGGTGAAGTCCAGACAGTAGAGTTCAACCTGATGTAGG  200

seq1  TATTTGTAAAATCATGTCTTGGAGGCACCTATAATAAAATAATACTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTAAAATCATGTCTTGGAGGCACCTATAATAAAATAATACTGAAA  250

seq1  GAAAGCACACAGATTCATACACCAACTAATGCAGGGACAGGTTTGGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCACACAGATTCATACACCAACTAATGCAGGGACAGGTTTGGAGCA  300

seq1  TTCGTGCCAAGGTTCCAGGAGACTAAGATTCTGTGAAACTCTTTGTCTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTGCCAAGGTTCCAGGAGACTAAGATTCTGTGAAACTCTTTGTCTCG  350

seq1  GGTCTGGGTCCAAGCCTTTAGGCCTGTCATTCAGACTTCACTGGAGTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGGGTCCAAGCCTTTAGGCCTGTCATTCAGACTTCACTGGAGTGGG  400

seq1  TGTGTCAGTTGAGGAAATAGTTCAGTGTTTTAAAAGGAACCATTGATTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCAGTTGAGGAAATAGTTCAGTGTTTTAAAAGGAACCATTGATTGA  450

seq1  CCCTACAATGTCTTTTGTATCTCCATGGTTGAGTTTGTAAGATGATGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTACAATGTCTTTTGTATCTCCATGGTTGAGTTTGTAAGATGATGTTG  500

seq1  TTGTTGCTGCTGTTGTAACAGTGTCCCTAGGACTATTTCTGTTTATGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGCTGCTGTTGTAACAGTGTCCCTAGGACTATTTCTGTTTATGATC  550

seq1  TGACGTAACTCAGAAGCATTTTTCTCTAACTTGACTCCAGAACAGATTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGTAACTCAGAAGCATTTTTCTCTAACTTGACTCCAGAACAGATTAC  600

seq1  TACAGCTAAACAGAAGATCATTAAGAGGCAGCATGTGGGTAAGTGGAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTAAACAGAAGATCATTAAGAGGCAGCATGTGGGTAAGTGGAACA  650

seq1  TCTAAACACACAGGCATTTAAAAAGGTGTCCTTTCCACTGTCTTAGCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAACACACAGGCATTTAAAAAGGTGTCCTTTCCACTGTCTTAGCCAT  700

seq1  TTAAAGAATGGTGTTGTTATAGAAATCTACCGTAGATTCAGCCATTACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAATGGTGTTGTTATAGAAATCTACCGTAGATTCAGCCATTACTT  750

seq1  ACAATGCCCTTCACCCTGTTGGATTATCCTCTGAGAGAAAGTCAGCTGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGCCCTTCACCCTGTTGGATTATCCTCTGAGAGAAAGTCAGCTGCT  800

seq1  TTCATTGACAGGTTTTGAAGCTGAGGATAGATTATCATCACCAAAAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGACAGGTTTTGAAGCTGAGGATAGATTATCATCACCAAAAATGA  850

seq1  AATTGGGGGAGATATTTTGTGTTGCAAAATTTAAGCACACACTTACACCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGGGGAGATATTTTGTGTTGCAAAATTTAAGCACACACTTACACCT  900

seq1  GATCTACAAATTAGTAAATTTATCTAATTAATTTAAATTATCCATGATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACAAATTAGTAAATTTATCTAATTAATTTAAATTATCCATGATTT  950

seq1  TGCATACCTTCTCTCTCTTTTTTTTTCTGACTCAAAAAAAATTATAGAAA  1000
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGCATACCTTCTCTCTCTTTTTTTTTCTGACTC-AAAAAAATTATAGAAA  999

seq1  ACTAGTATAGAGACAAATATAATTTATGCTGTTCTCCTTAAATTTATTTT  1050
      |||||||||||||  ||||||| |||||||| ||| |||||  |||||||
seq2  ACTAGTATAGAGAACAATATAA-TTATGCTG-TCT-CTTAA--TTATTTT  1044

seq1  AGGACAACTGACCATATAAAATAGAGCTAAAAATTCCAATGTACGTTAAA  1100
      | ||| ||||||   ||||||||||||| |||||||  ||||||||    
seq2  A-GAC-ACTGAC--AATAAAATAGAGCT-AAAATTC--ATGTACGT----  1083

seq1  AACCTGGGGAATATTGTTTTTATGAATATTTTTTCTATCTAGAAATCCTT  1150
      || ||||||||| |||  |||||||| ||||||||||||||||||| | |
seq2  AAACTGGGGAAT-TTG--TTTATGAA-ATTTTTTCTATCTAGAAATTC-T  1128

seq1  TTGGCACTA  1159
      |||||||||
seq2  TTGGCACTA  1137

seq1: chr1_32373051_32374138
seq2: B6Ng01-119G05.g_70_1145 (reverse)

seq1  TTAATCAATACTAATATATATTTTTTTTTGCCACATGAACCTCTTTTATG  50
      ||||||| |||     |||||| ||||||  ||| || ||||| ||||||
seq2  TTAATCATTAC-----TATATTATTTTTTTGCAC-TG-ACCTC-TTTATG  42

seq1  TTTCAAGAGAATCCAATTCAGGCAACCTTCTCAGAATTCCCTTGCTCTCT  100
      ||  | |||||||||| |||||||  ||||||||||||||||||||||||
seq2  TTCAAGGAGAATCCAA-TCAGGCA--CTTCTCAGAATTCCCTTGCTCTCT  89

seq1  ATCGTTCCTTTGAGGAAATGCTGATCTCCCTGGGGGCTGCCTATATCCAG  150
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  ATCGTTCC-TTGAGGAAATGCTGATCTCCCT-GGGGCTGCCTATATCCAG  137

seq1  CATCCCCAGAGCAGTGTTGTGATGTTTTCTCTGAACTGACTCCTTCATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCCCAGAGCAGTGTTGTGATGTTTTCTCTGAACTGACTCCTTCATTT  187

seq1  TTTATGTCACCTAGGAACAGGGAACC-TTTTGTTACTATCTTTGATGGAG  249
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TTTATGTCACCTAGGAACAGGGAACCTTTTTGTTACTATCTTTGATGGAG  237

seq1  CCGTATAGCTCACACCTTCAGTATCATTGAATAATCTTTAAAAAATAATA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATAGCTCACACCTTCAGTATCATTGAATAATCTTTAAAAAATAATA  287

seq1  TCTTTGGTTTTTATATGCAGCATCCTCTTGGGAAACAAAGACAGAACAAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGTTTTTATATGCAGCATCCTCTTGGGAAACAAAGACAGAACAAT  337

seq1  GACTTTGGTAGATGTAGACACTAAACCCTCATTTTTTCATGTTTTCCCCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGGTAGATGTAGACACTAAACCCTCATTTTTTCATGTTTTCCCCC  387

seq1  ATCACCCATCCCATTAGCAAAGCATTATGCTAATATATACCAAGTAAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCCATCCCATTAGCAAAGCATTATGCTAATATATACCAAGTAAGGA  437

seq1  CATTAAGCATTCATGGTCTTCCTTAGCCAGTGACACTTAAGATCCCTCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAGCATTCATGGTCTTCCTTAGCCAGTGACACTTAAGATCCCTCTG  487

seq1  AGTGGAACAACATAACCACATAGAAATTAGAATACATTTGGTTTATGTTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGAACAACATAACCACATAGAAATTAGAATACATTTGGTTTATGTTT  537

seq1  TCTCGACATGTAAGAATGAAAAATGCATCCTATTTGTCATGGCATTTATT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCGACATGTAAGAATGAAAAATGCATCCTATTTGTCATGGCATTTATT  587

seq1  CCATGGTTAATTTAATATTTGGGCATTTCTCTTCATTGTATCTATTCCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGTTAATTTAATATTTGGGCATTTCTCTTCATTGTATCTATTCCTA  637

seq1  CTTTCCCAGTATAACAAAGAAATTTGATGGTATGAAGCTATCAAAAGGTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCAGTATAACAAAGAAATTTGATGGTATGAAGCTATCAAAAGGTA  687

seq1  GAAAATGCAGGGGTCTGAATAATTAATTGATGCTGTTGAATCTGTATTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCAGGGGTCTGAATAATTAATTGATGCTGTTGAATCTGTATTTT  737

seq1  TCCACATTTTGTTGATTGCAAATAATATCAATTCAGCTTACATTAGAATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATTTTGTTGATTGCAAATAATATCAATTCAGCTTACATTAGAATT  787

seq1  AATAGATGTTATCTCAGGGACCTCACATATTTCAAGAAAATCTTTATTCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGATGTTATCTCAGGGACCTCACATATTTCAAGAAAATCTTTATTCA  837

seq1  TATTCAGAAGGAATAGAGGATAAATTAAGGCCCCAAGAATGTTGGCGAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGAAGGAATAGAGGATAAATTAAGGCCCCAAGAATGTTGGCGAAG  887

seq1  GTGACTCAAATATCAAGAAGCACTTCATCTCTAGTATCTAATATCCTCTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTCAAATATCAAGAAGCACTTCATCTCTAGTATCTAATATCCTCTA  937

seq1  ATTACTTCCATTTTCTCCCACTGTAAATTAGTTTCCTGTGACAAAAATAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCCATTTTCTCCCACTGTAAATTAGTTTCCTGTGACAAAAATAC  987

seq1  ACTGTTCTTAGTTTTGATTTTCATGTTAAGACACCAATCAGAGTATGGGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTCTTAGTTTTGATTTTCATGTTAAGACACCAATCAGAGTATGGGA  1037

seq1  TTTTAGGTTTCATTGCTTAATTCTACATTTAAAGAATTC  1088
      |||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGTTTCATTGCTTAATTCTACATTTAAAGAATTC  1076