BAC Information

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BAC

Clone NameB6Ng01-119G07
Chromosome1 (Build37)
Map Location 173,190,703 - 173,371,695
singlet/doubletdoublet
Overlap geneB4galt3, Ppox, Usp21, Ufc1, EG622236, Dedd, Nit1, Pfdn2, 1190002J23Rik, Pvrl4, Arhgap30, Usf1, EG226654, F11r
Upstream geneSh2d1b1, EG665574, 1700015E13Rik, Nos1ap, LOC100040002, LOC640532, Olfml2b, Atf6, Dusp12, Fcrlb, Fcrla, LOC100040778, Fcgr2b, Fcgr4, Fcgr3, 1700009P17Rik, Sdhc, Mpz, Pcp4l1, Nr1i3, Tomm40l, Apoa2, Fcer1g, Ndufs2, Adamts4
Downstream geneRefbp2, Itlna, Cd244, Ly9, Slamf7, Cd48, LOC100041098, Slamf1, Cd84, Slamf6, Vangl2, LOC100040199, Nhlh1, Ncstn, Copa, Pex19, LOC100041219, Wdr42a, Pea15a, Casq1, Timm23p, Atp1a2, Igsf8, Kcnj9, Kcnj10, Pigm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119G07.bB6Ng01-119G07.g
ACCDH923618DH923619
length640845
definitionDH923618|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G07, 5' end.DH923619|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(173,371,056 - 173,371,695)(173,190,703 - 173,191,544)
sequence
gaattccagggtttcaatgcctggaaaaccccaatatgcatttgctcatc
ctgctacccacagcctccgcccaaccctgagaaacttctctctcacttaa
cctttgcttttggacacctgagcctgtgagtcctgaaattccctagtctc
aaatccaacagatgtgaaaatcaagccccattacttcctaatttaccaca
taaaatgtgtgtagcacttcaatctacctttgcgggtttgggagagggca
tgttggcaccctcccctgtgaatctccagctgtgtgtagacggtggcaga
tccaagcagccaaggccatactccctataataccagagtgtaagaataaa
aactacagccaggcatggtggcacacgcctttaatcccagcacttgggag
gcagaggcaggcggatatctgaattcgagaccagcctggtctacagagtg
agttccaggacagccagggctacacagagaaaccctgtctgggggtggga
gggacgaccacccacagtccgagttctatgagttcgaggctactagcctg
gtccacccagcacatttcaggccagctaaagctacacagagactcaaaag
aacaacaacaaaaacaagaaggaggaagaggaagaggagg
gaattcaatgagaggaacaggatgtggtctggtattgcctaataatcaac
aaagcaaagcaaagccaaaaaaaaaaaaaaaaatcctacaagagtggagc
catctgtcaatctgtccagtggtggcggaatgcgaggaccagcactggct
gaaatggatctcccttccttgaggggtaacctagtcagtcttatgtgcgt
cagggactggcgaaagtgtcagtggagaatttcacatgctaagtggcaaa
tgcagagcttctaggattgtggaagggactgaatgctgaggtaggaagga
gctgtaggttaggaagaccctgaggtgagggtggactgtggagacactaa
aggcatcttgctctgccaaaggagagtaggggtgagagggggagaggcag
gcacagagggcaaggctgtttgtgtgctgtattcattgggaccaggcttg
gctggtcaagttctaaacgaggcagggcagagcgttgtagagtgctctgt
gccttacaccagcaagcacagtggctgctctctctgcaggcttgagggaa
gggctggctacactcctctctttagcgtgcattgctctcactcccatgct
tgctctctgatgtgggccttgtggtgcttctaccaaccaggcagggggag
gcagcaacaggacagtggcatcttcagttgcttcatctcagtggtaagat
tggaccaacagtatgtttatggaacttaatactatgaactcacggtacaa
gcagagctttgttgaagtgaaggtaaaacacaaatgatatacggccgtgt
ccttaaagagctcacactgcatcctggggggagggggggaggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_173371056_173371695
seq2: B6Ng01-119G07.b_45_684 (reverse)

seq1  CCTCCTCTTCCTCTTCCTCCTTCTTGTTTTTGTTGTTGTTCTTTTGAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTTCCTCTTCCTCCTTCTTGTTTTTGTTGTTGTTCTTTTGAGTC  50

seq1  TCTGTGTAGCTTTAGCTGGCCTGAAATGTGCTGGGTGGACCAGGCTAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTAGCTTTAGCTGGCCTGAAATGTGCTGGGTGGACCAGGCTAGTA  100

seq1  GCCTCGAACTCATAGAACTCGGACTGTGGGTGGTCGTCCCTCCCACCCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGAACTCATAGAACTCGGACTGTGGGTGGTCGTCCCTCCCACCCCC  150

seq1  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAG  200

seq1  ACCAGGCTGGTCTCGAATTCAGATATCCGCCTGCCTCTGCCTCCCAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTGGTCTCGAATTCAGATATCCGCCTGCCTCTGCCTCCCAAGTG  250

seq1  CTGGGATTAAAGGCGTGTGCCACCATGCCTGGCTGTAGTTTTTATTCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATTAAAGGCGTGTGCCACCATGCCTGGCTGTAGTTTTTATTCTTA  300

seq1  CACTCTGGTATTATAGGGAGTATGGCCTTGGCTGCTTGGATCTGCCACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTGGTATTATAGGGAGTATGGCCTTGGCTGCTTGGATCTGCCACCG  350

seq1  TCTACACACAGCTGGAGATTCACAGGGGAGGGTGCCAACATGCCCTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACACACAGCTGGAGATTCACAGGGGAGGGTGCCAACATGCCCTCTCC  400

seq1  CAAACCCGCAAAGGTAGATTGAAGTGCTACACACATTTTATGTGGTAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCCGCAAAGGTAGATTGAAGTGCTACACACATTTTATGTGGTAAAT  450

seq1  TAGGAAGTAATGGGGCTTGATTTTCACATCTGTTGGATTTGAGACTAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGTAATGGGGCTTGATTTTCACATCTGTTGGATTTGAGACTAGGG  500

seq1  AATTTCAGGACTCACAGGCTCAGGTGTCCAAAAGCAAAGGTTAAGTGAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGGACTCACAGGCTCAGGTGTCCAAAAGCAAAGGTTAAGTGAGA  550

seq1  GAGAAGTTTCTCAGGGTTGGGCGGAGGCTGTGGGTAGCAGGATGAGCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTTTCTCAGGGTTGGGCGGAGGCTGTGGGTAGCAGGATGAGCAAA  600

seq1  TGCATATTGGGGTTTTCCAGGCATTGAAACCCTGGAATTC  640
      ||||||||||||||||||||||||||||||||||||||||
seq2  TGCATATTGGGGTTTTCCAGGCATTGAAACCCTGGAATTC  640

seq1: chr1_173190703_173191544
seq2: B6Ng01-119G07.g_67_910

seq1  GAATTCAATGAGAGGAACAGGATGTGGTCTGGTATTGCCTAATAATCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAGAGGAACAGGATGTGGTCTGGTATTGCCTAATAATCAAC  50

seq1  AAAGCAAAGCAAAGCCAAAAAAAAAAAAAAAAATCCTACAAGAGTGGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAAGCAAAGCCAAAAAAAAAAAAAAAAATCCTACAAGAGTGGAGC  100

seq1  CATCTGTCAATCTGTCCAGTGGTGGCGGAATGCGAGGACCAGCACTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCAATCTGTCCAGTGGTGGCGGAATGCGAGGACCAGCACTGGCT  150

seq1  GAAATGGATCTCCCTTCCTTGAGGGGTAACCTAGTCAGTCTTATGTGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGATCTCCCTTCCTTGAGGGGTAACCTAGTCAGTCTTATGTGCGT  200

seq1  CAGGGACTGGCGAAAGTGTCAGTGGAGAATTTCACATGCTAAGTGGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACTGGCGAAAGTGTCAGTGGAGAATTTCACATGCTAAGTGGCAAA  250

seq1  TGCAGAGCTTCTAGGATTGTGGAAGGGACTGAATGCTGAGGTAGGAAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGCTTCTAGGATTGTGGAAGGGACTGAATGCTGAGGTAGGAAGGA  300

seq1  GCTGTAGGTTAGGAAGACCCTGAGGTGAGGGTGGACTGTGGAGACACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGGTTAGGAAGACCCTGAGGTGAGGGTGGACTGTGGAGACACTAA  350

seq1  AGGCATCTTGCTCTGCCAAAGGAGAGTAGGGGTGAGAGGGGGAGAGGCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCTTGCTCTGCCAAAGGAGAGTAGGGGTGAGAGGGGGAGAGGCAG  400

seq1  GCACAGAGGGCAAGGCTGTTTGTGTGCTGTATTCATTGGGACCAGGCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGAGGGCAAGGCTGTTTGTGTGCTGTATTCATTGGGACCAGGCTTG  450

seq1  GCTGGTCAAGTTCTAAACGAGGCAGGGCAGAGCGTTGTAGAGTGCTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTCAAGTTCTAAACGAGGCAGGGCAGAGCGTTGTAGAGTGCTCTGT  500

seq1  GCCTTACACCAGCAAGCACAGTGGCTGCTCTCTCTGCAGGCTTGAGGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTACACCAGCAAGCACAGTGGCTGCTCTCTCTGCAGGCTTGAGGGAA  550

seq1  GGGCTGGCTACACTCCTCTCTTTAGCGTGCATTGCTCTCACTCCCATGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTGGCTACACTCCTCTCTTTAGCGTGCATTGCTCTCACTCCCATGCT  600

seq1  TGCTCTCTGATGTGGGCCTTGTGGTGCTTCTACCAACCAGGCAGGGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCTGATGTGGGCCTTGTGGTGCTTCTACCAACCAGGCAGGGGGAG  650

seq1  GCAGCAACAGGACAGTGGCATCTTCAGTTGCTTCATCTCAGTGGTAAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAACAGGACAGTGGCATCTTCAGTTGCTTCATCTCAGTGGTAAGAT  700

seq1  TGGACCAACAGTATGTTTATGGAACTTAATACTATGAACTCACGGTACAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCAACAGTATGTTTATGGAACTTAATACTATGAACTCACGGTACAA  750

seq1  GCAGAGCTTTGTTGAAGTGAAGGTAAAACACAAATGATATACGGCCGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCTTTGTTGAAGTGAAGGTAAAACACAAATGATATACGGCCGTGT  800

seq1  CCTTAAAGAGCTCACACTGCATCCTGGGGG--AGGGGGGAGGTT  842
      ||||||||||||||||||||||||||||||   |||||||||||
seq2  CCTTAAAGAGCTCACACTGCATCCTGGGGGGAGGGGGGGAGGTT  844