BAC Information

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BAC

Clone NameB6Ng01-119N23
Chromosome1 (Build37)
Map Location 127,015,226 - 127,015,752
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119N23.bB6Ng01-119N23.g
ACCDH923968DH923969
length5211,197
definitionDH923968|Mus musculus domesticus DNA, BAC clone: B6Ng01-119N23, 5' end.DH923969|Mus musculus domesticus DNA, BAC clone: B6Ng01-119N23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
actggggactcagggtaccccattgctgtagggaatggtgcaaatatcag
ggcagtcatctgactctatgaggaacatgtagatacatggatgtctgaat
ccttcaagtccagacaccagtgcagtgcctcacacattcctcacaggtct
ccacactgagaagcccttatccttgggctgacgtccagagaggagctcta
ttacttgtacttttttttcaaacacaatttttatttcattcttttttctt
ttttaatcccatgcatacacaacatgctttgattatcttccgcctattgt
tgactcttatgcccttccccctcccactaaaatgtttccttccaacaggt
ctgcctctctctgtttgtgacccatggcatttaattgcacaagtgtattt
gtgctaggtgtacttgtgtgtgtgtaatatatgtatttgtgtgtgtgtgt
ttctctctctcactgtgcatgtgtgtgtatatgtatatttgtttgtatgt
atatatgtatatgtgggagga
gaattcaaggcccatacataaacatgataaaagaaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccccaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggcaacaacacccttctccatagtcacaaataatataaaatatctcggca
tgactctaactaaggaagtgaaagatctgtatgataaaaatcaagtctct
gaagaaagaaattaaagaagatctcagaagatggaaggatctcccatgct
catggattggcaggatcaacattgtaaaaatggctatcttgccaaaagca
atttacagattcaatgcaatccccatcaaaattccaactcaattcttcaa
cgaattagaaggagcaatttgcaaattcatctggaataacaaaaaaccta
ggatagcaaaaactcttctccaggataaaagaacctctggtggaatcacc
atgcctgacctaaagctttactacagagcaattgtgataaaaaactgcat
ggtactggtatagagacagacaagtagaccaatggaatagacttgaagac
ccagaaatgaacccacacacctatggtcacttgatctttgacaagggagc
tagaaccatccagtggaagaaagacagcatcttcaacaattggtgctggc
acaactggtgttatcatgtagaagaatgcgaatcatccatactatctcct
gtactaggtcaaatctaagtggatcaagactcactaaacgagaactgaac
tatagaggagaaagtgggaagcctgagaatcgctaggggcaattctgaac
agacgcatggcttggtgtagatcgagattgcatggactatggaacaccag
gttcgcagcaaagaactcgtctctataacgaataagggactgctacg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_127015226_127015752
seq2: B6Ng01-119N23.b_50_576 (reverse)

seq1  TCCTCCCACATATACATATATACATACAAACAAATATACATATACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCACATATACATATATACATACAAACAAATATACATATACACACA  50

seq1  CATGCACAGTGAGAGAGAGAAACACACACACACAAATACATATATTACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACAGTGAGAGAGAGAAACACACACACACAAATACATATATTACAC  100

seq1  ACACACAAGTACACCTAGCACAAATACACTTGTGCAATTAAATGCCATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAGTACACCTAGCACAAATACACTTGTGCAATTAAATGCCATGG  150

seq1  GTCACAAACAGAGAGAGGCAGACCTGTTGGAAGGAAACATTTTAGTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAAACAGAGAGAGGCAGACCTGTTGGAAGGAAACATTTTAGTGGGA  200

seq1  GGGGGAAGGGCATAAGAGTCAACAATAGGCGGAAGATAATCAAAGCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAGGGCATAAGAGTCAACAATAGGCGGAAGATAATCAAAGCATGT  250

seq1  TGTGTATGCATGGGATTAAAAAAGAAAAAAGAATGAAATAAAAATTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCATGGGATTAAAAAAGAAAAAAGAATGAAATAAAAATTGTGT  300

seq1  TTGAAAAAAAAGTACAAGTAATAGAGCTCCTCTCTGGACGTCAGCCCAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAAAAAGTACAAGTAATAGAGCTCCTCTCTGGACGTCAGCCCAAG  350

seq1  GATAAGGGCTTCTCAGTGTGGAGACCTGTGAGGAATGTGTGAGGCACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGGCTTCTCAGTGTGGAGACCTGTGAGGAATGTGTGAGGCACTGC  400

seq1  ACTGGTGTCTGGACTTGAAGGATTCAGACATCCATGTATCTACATGTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTGTCTGGACTTGAAGGATTCAGACATCCATGTATCTACATGTTCC  450

seq1  TCATAGAGTCAGATGACTGCCCTGATATTTGCACCATTCCCTACAGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGAGTCAGATGACTGCCCTGATATTTGCACCATTCCCTACAGCAAT  500

seq1  GGGGTACCCTGAGTCCCCAGTGAATTC  527
      |||||||||||||||||||||||||||
seq2  GGGGTACCCTGAGTCCCCAGTGAATTC  527