BAC Information

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BAC

Clone NameB6Ng01-120B16
Chromosome1 (Build37)
Map Location 186,931,919 - 187,084,399
singlet/doubletdoublet
Overlap genenone
Upstream geneEG433387, EG629032, LOC666714, Hlx1, Mosc1, Mosc2, LOC100039079, C130074G19Rik, Mark1
Downstream geneIars2, Bpnt1, Eprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik, LOC677785, Lyplal1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120B16.bB6Ng01-120B16.g
ACCDH924135DH924136
length1,215505
definitionDH924135|Mus musculus domesticus DNA, BAC clone: B6Ng01-120B16, 5' end.DH924136|Mus musculus domesticus DNA, BAC clone: B6Ng01-120B16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(186,931,919 - 186,933,151)(187,083,889 - 187,084,399)
sequence
gaattcttactgttcattcaccccaacctcccattctctgttctgtgaga
aaactgaggtcctctggataagtcacaggagaatagagcccagagggagg
ctccccaagccaggtcctccgctctctgccttctttttctccacagactt
gattccagtgcttcgggggtgtcatgggtcatacttaccgaagtgctggc
tgaagagaagcatgcgcctaaaaaggagagagaattagggaagtgaggcg
tttgattttgtagaatgaaatcctcacctattgtttagattcattgaaaa
atactgaagcctgcacttgcacacctgccatgatatctctctgacagtcg
ggaaccctacacttttgtcaactaaagttgacgttttattttttttctta
aatgtcactttcttactgcaagaagccatctagaaggtcatgtcacaccg
ggcttgggggacataaatcttcaggctgtttctcatctcagaggttttga
gaggttcagtcaagtgtcctttggccagaacacgtgtgatgttgatctcg
tggttggcttatgggtcatgcatatatgctgctgctctctgatgtcatag
gagcacattactcagaaagtaccatgaatattgtcatcatggacattgtc
accatgggcattgtcatcatgggcattatcaccatgggtgttgtcatcag
ggatattgtcaccatgaacattgtcaccatggacattgtcaccatgggca
ttgtcaccattggcattatcaccatgggcattgtcatcagggatattgtc
accatgggcattgtcaccattggcattatcaccatgggcattgtcatcag
ggatattgtcaccatgaacattgtcaccatggacattgtcaccatggtca
ttgtcaccattggcattatcaccacgggcattgtcaccatgggcattatc
accatggacattgtcaccattggcattatcacatggacattgtcaccatg
ggcattgtcaccatagacattgttcaccatcgacattaggcttctttaaa
ccaagtgctccccagatgattacactgaaaatgatgttctcttttccttt
tctatacttattctttggacaggtcattagttgtaccttcctgagaatgg
atagatctcaatcaagtgttggtcccaattcactattgtttgttctaact
atttatattaaatgg
agtaacaacccctcaccagtaactgctgagggctgagtccagccgactcc
aggctgtggcacatctcttcagtggagctttctccatgcaaacacttcca
gaaaaagaaactgcctggcaaaacaagcaaacacatcactgaggaaaaag
gttcatattcacaaacctcactgactataaactggaattctggaggagca
ggacagtatgaaaagaaagaatttttgtgggtattgtttgagagggactc
attctttatatagtcctggctgtcctgaaactcattatgcagaccagacc
agcctcaaactcacaaagacccacctgcctctgcctcctgaatgctggga
ttaaatgtttccacacccgaaagaaaagaacttaattatgtaagtttgat
ctaggagaatagaaggcaaatcattatgccttaaaactctctctctctct
ctctcatgcatgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtg
tgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_186931919_186933151
seq2: B6Ng01-120B16.b_46_1260

seq1  GAATTCTTACTGTTCATTCACCCCAACCTCCCATTCTCTGTTCTGTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACTGTTCATTCACCCCAACCTCCCATTCTCTGTTCTGTGAGA  50

seq1  AAACTGAGGTCCTCTGGATAAGTCACAGGAGAATAGAGCCCAGAGGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAGGTCCTCTGGATAAGTCACAGGAGAATAGAGCCCAGAGGGAGG  100

seq1  CTCCCCAAGCCAGGTCCTCCGCTCTCTGCCTTCTTTTTCTCCACAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCAAGCCAGGTCCTCCGCTCTCTGCCTTCTTTTTCTCCACAGACTT  150

seq1  GATTCCAGTGCTTCGGGGGTGTCATGGGTCATACTTACCGAAGTGCTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCAGTGCTTCGGGGGTGTCATGGGTCATACTTACCGAAGTGCTGGC  200

seq1  TGAAGAGAAGCATGCGCCTAAAAAGGAGAGAGAATTAGGGAAGTGAGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGAAGCATGCGCCTAAAAAGGAGAGAGAATTAGGGAAGTGAGGCG  250

seq1  TTTGATTTTGTAGAATGAAATCCTCACCTATTGTTTAGATTCATTGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTTTGTAGAATGAAATCCTCACCTATTGTTTAGATTCATTGAAAA  300

seq1  ATACTGAAGCCTGCACTTGCACACCTGCCATGATATCTCTCTGACAGTCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGAAGCCTGCACTTGCACACCTGCCATGATATCTCTCTGACAGTCG  350

seq1  GGAACCCTACACTTTTGTCAACTAAAGTTGACGTTTTATTTTTTTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACCCTACACTTTTGTCAACTAAAGTTGACGTTTTATTTTTTTTCTTA  400

seq1  AATGTCACTTTCTTACTGCAAGAAGCCATCTAGAAGGTCATGTCACACCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCACTTTCTTACTGCAAGAAGCCATCTAGAAGGTCATGTCACACCG  450

seq1  GGCTTGGGGGACATAAATCTTCAGGCTGTTTCTCATCTCAGAGGTTTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGGGGGACATAAATCTTCAGGCTGTTTCTCATCTCAGAGGTTTTGA  500

seq1  GAGGTTCAGTCAAGTGTCCTTTGGCCAGAACACGTGTGATGTTGATCTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCAGTCAAGTGTCCTTTGGCCAGAACACGTGTGATGTTGATCTCG  550

seq1  TGGTTGGCTTATGGGTCATGCATATATGCTGCTGCTCTCTGATGTCATAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGGCTTATGGGTCATGCATATATGCTGCTGCTCTCTGATGTCATAG  600

seq1  GAGCACATTACTCAGAAAGTACCATGAATATTGTCATCATGGACATTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCACATTACTCAGAAAGTACCATGAATATTGTCATCATGGACATTGTC  650

seq1  ACCATGGGCATTGTCATCATGGGCATTATCACCATGGGTGTTGTCATCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGCATTGTCATCATGGGCATTATCACCATGGGTGTTGTCATCAG  700

seq1  GGATATTGTCACCATGAACATTGTCACCATGGACATTGTCACCATGGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGTCACCATGAACATTGTCACCATGGACATTGTCACCATGGGCA  750

seq1  TTGTCACCATTGGCATTATCACCATGGGCATTGTCATCAGGGATATTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACCATTGGCATTATCACCATGGGCATTGTCATCAGGGATATTGTC  800

seq1  ACCATGGGCATTGTCACCATTGGCATTATCACCATGGGCATTGTCATCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGGCATTGTCACCATTGGCATTATCACCATGGGCATTGTCATCAG  850

seq1  GGATATTGTCACCATGAACATTGTCACCATGGACATTGTCACCATGGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATTGTCACCATGAACATTGTCACCATGGACATTGTCACCATGGTCA  900

seq1  TTGTCACCATTGGCATTATCACCACGGGCATTGTCACCATGGGCATTATC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACCATTGGCATTATCACCACGGGCATTGTCACCATGGGCATTATC  950

seq1  ACCATGGACATTGTCACCATTGGCATTATCACCATGGACATTGTCACCAT  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCATGGACATTGTCACCATTGGCATTATCA-CATGGACATTGTCACCAT  999

seq1  GGGCATTGTCACCATAGACATTG-TCACCATCGACATTAGGCTTCTTTAA  1049
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGGCATTGTCACCATAGACATTGTTCACCATCGACATTAGGCTTCTTTAA  1049

seq1  CACCAAGTGCTCACCAGATGATTACACTGAAAATGATGTTTCTCTTTTCC  1099
       ||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  -ACCAAGTGCTCCCCAGATGATTACACTGAAAATGATG-TTCTCTTTTCC  1097

seq1  TTTTCTATACTGTATTCTTTGGACAAAGTCATTAGTTGTACC-TCCTGAA  1148
      ||||||||||| |||||||||||| | ||||||||||||||| ||||| |
seq2  TTTTCTATACT-TATTCTTTGGAC-AGGTCATTAGTTGTACCTTCCTG-A  1144

seq1  GAATGGAATAGTATCTTCAAATCAAGTTGTTTGTCCCCTATTCACACTTA  1198
      |||||| |||| ||||   ||||||| |||| || ||| ||||||   ||
seq2  GAATGG-ATAG-ATCT--CAATCAAG-TGTTGGT-CCCAATTCAC---TA  1185

seq1  TTTGTTTGTTCAATAACTTATTTATATTAATATGG  1233
       ||||||||||  |||| |||||||||||| ||||
seq2  -TTGTTTGTTC--TAAC-TATTTATATTAA-ATGG  1215

seq1: chr1_187083889_187084399
seq2: B6Ng01-120B16.g_66_576 (reverse)

seq1  ACTCACACACACACACACACACACACAGACACACACACACACACATGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACACACACACACACACACACACAGACACACACACACACACATGCAT  50

seq1  GAGAGAGAGAGAGAGAGAGTTTTAAGGCATAATGATTTGCCTTCTATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGTTTTAAGGCATAATGATTTGCCTTCTATTCT  100

seq1  CCTAGATCAAACTTACATAATTAAGTTCTTTTCTTTCGGGTGTGGAAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGATCAAACTTACATAATTAAGTTCTTTTCTTTCGGGTGTGGAAACA  150

seq1  TTTAATCCCAGCATTCAGGAGGCAGAGGCAGGTGGGTCTTTGTGAGTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCATTCAGGAGGCAGAGGCAGGTGGGTCTTTGTGAGTTTG  200

seq1  AGGCTGGTCTGGTCTGCATAATGAGTTTCAGGACAGCCAGGACTATATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGGTCTGGTCTGCATAATGAGTTTCAGGACAGCCAGGACTATATAA  250

seq1  AGAATGAGTCCCTCTCAAACAATACCCACAAAAATTCTTTCTTTTCATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGAGTCCCTCTCAAACAATACCCACAAAAATTCTTTCTTTTCATAC  300

seq1  TGTCCTGCTCCTCCAGAATTCCAGTTTATAGTCAGTGAGGTTTGTGAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTGCTCCTCCAGAATTCCAGTTTATAGTCAGTGAGGTTTGTGAATA  350

seq1  TGAACCTTTTTCCTCAGTGATGTGTTTGCTTGTTTTGCCAGGCAGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTTTTTCCTCAGTGATGTGTTTGCTTGTTTTGCCAGGCAGTTTCT  400

seq1  TTTTCTGGAAGTGTTTGCATGGAGAAAGCTCCACTGAAGAGATGTGCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGAAGTGTTTGCATGGAGAAAGCTCCACTGAAGAGATGTGCCAC  450

seq1  AGCCTGGAGTCGGCTGGACTCAGCCCTCAGCAGTTACTGGTGAGGGGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGAGTCGGCTGGACTCAGCCCTCAGCAGTTACTGGTGAGGGGTTG  500

seq1  TTACTGAATTC  511
      |||||||||||
seq2  TTACTGAATTC  511