BAC Information

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BAC

Clone NameB6Ng01-120E08
Chromosome1 (Build37)
Map Location 132,018,151 - 132,198,447
singlet/doubletdoublet
Overlap geneThsd7b
Upstream geneLOC100042732, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120E08.bB6Ng01-120E08.g
ACCDH924257DH924258
length1,1781,119
definitionDH924257|Mus musculus domesticus DNA, BAC clone: B6Ng01-120E08, 5' end.DH924258|Mus musculus domesticus DNA, BAC clone: B6Ng01-120E08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,018,151 - 132,019,340)(132,197,323 - 132,198,447)
sequence
gaattctgggttcttctaaactgacattggtactcagccaaagacaacag
gtctggggttggtgaaggtgtatttttgtcccaatgcactgaggtttaat
atctcttaagaaccaggctggtttccagagccacatgggaagagtgttct
tgctgaatctaactcacttcatgcattggaacagaaaaacaagaactcaa
taaaaacattttatagcaacttctgttttttaatttaatatagcctttac
tctctttaataagtctgatctctttgattctcgatatcattagcttgtaa
tacagacaaggggtatatattctaaaatttctctctctctttccctcttc
tctacctctcgatatgctaatatctctccatctatctatctatctatcta
tctatctatctatctatctacctacctacctacctacctacctacctacc
tacctatgtctctatctctatctccctggacaacagcaggcatgggattt
atattttcttgaatgagtacttagcatgaactgcaatgagtatttatgat
gtattttgtgacatttcacaagtttgttatagcagcggttttaaaagaca
gtccctccttcatggagagtgcattgcattttaaaaaagaacacttggtt
ttctgaaacttattttagtatctgcattatgtaattgaaatgggacactt
tgtcgtgtatttctctaagtgacttgatttaatttctcctcttgggcatt
gatgttataaatttggcaccttagtgccataggataacctgcgttttcac
atgcttgagacaatgagtggagctcagagacggtgatgcttagtctcacc
aaatttttctccatgtgtctcatactcatgcagttttatcagagtttgtg
tagtgatttaatcttcaattgactaatttttagagtcttgttcctgatat
attaagctcttttgtatattcatcctatttcccttgggttccagtgcata
catttcctgactagaatacgggctttttaaatgcgctcacagataagctt
ttcaagttctgatttacagcgatatgcattgagcatgcaggcccagctga
tgagcagtatgatctgactgtaattgatacttggtctataactgcactgc
tgttccaaagtcctctcaagatataaat
gaattctctacagtgcttctaaatttatggaagccatgggaaaacaggat
ataacagagaggaaatggcatgctgtacacagttttctaaatagcagaag
tgctgattgtagctgacaaggggattccagtgcattggccacaaaatagt
ccagggtcacctcctctctcattcgttcccctcctgcctgtgggcactga
gaaaagaggcaaatccagctttcctcttgtatgttacagaaatgccccca
cccttttctgggtgatggaaggtttctttagagccctgtgttgtgaaact
agtccaatctcacatataaaggaaagcaattgctacagatctagaataca
tacctttaaaattatttctgaggttttttttttttttctttttctttttt
ttctgcaatagggtttctctgtgtagccctggctgtcctggaactcattc
tgtagaccaggctggcctcaaactcagaaatttgcctgcctctgcctccc
aagtgctgggattaaaggcatgtgccaccactgccctgcaagttttgtgt
gttcttaagtctatcttccttgcatgattaaaattggctccagatttcca
atactggctattagtatcctcctgaaaaaaaaaatcctccagtagtcatt
tattttggacttactgggtgttggccagtatgccaatgtgacaatacatc
attagctttcacttttacagaaattctctgagctaggcattcccatttta
caacaaaatactgagattcagagagcttaaagagcaaatctcactcagaa
ataggggtttatgtacaccctatagactgtatatttctgtattccagttt
aaatatcacattactattatttctgtgaaattatggtattgaatatttat
ttattagtttgattacctaagtaattatttgactatgtttattcacatag
agatagcactatttctaccttgactatgttaagaagcaagaaggtgtctt
ttctggagacttagaccagcccggtggaggggcatttctttgaaagtggc
tgtttttaggtcctttcttggcgcccaattgaattgctactctatctcct
tttctcggtggaatattac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132018151_132019340
seq2: B6Ng01-120E08.b_47_1224

seq1  GAATTCTGGGTTCTTCTAAACTGACATTGGTACTCAGCCAAAGACAACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGTTCTTCTAAACTGACATTGGTACTCAGCCAAAGACAACAG  50

seq1  GTCTGGGGTTGGTGAAGGTGTATTTTTGTCCCAATGCACTGAGGTTTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGGTTGGTGAAGGTGTATTTTTGTCCCAATGCACTGAGGTTTAAT  100

seq1  ATCTCTTAAGAACCAGGCTGGTTTCCAGAGCCACATGGGAAGAGTGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTAAGAACCAGGCTGGTTTCCAGAGCCACATGGGAAGAGTGTTCT  150

seq1  TGCTGAATCTAACTCACTTCATGCATTGGAACAGAAAAACAAGAACTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAATCTAACTCACTTCATGCATTGGAACAGAAAAACAAGAACTCAA  200

seq1  TAAAAACATTTTATAGCAACTTCTGTTTTTTAATTTAATATAGCCTTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACATTTTATAGCAACTTCTGTTTTTTAATTTAATATAGCCTTTAC  250

seq1  TCTCTTTAATAAGTCTGATCTCTTTGATTCTCGATATCATTAGCTTGTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTAATAAGTCTGATCTCTTTGATTCTCGATATCATTAGCTTGTAA  300

seq1  TACAGACAAGGGGTATATATTCTAAAATTTCTCTCTCTCTTTCCCTCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGACAAGGGGTATATATTCTAAAATTTCTCTCTCTCTTTCCCTCTTC  350

seq1  TCTACCTCTCGATATGCTAATATCTCTCCATCTATCTATCTATCTATCTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCTCGATATGCTAATATCTCTCCATCTATCTATCTATCTATCTA  400

seq1  TCTATCTATCTATCTATCTACCTACCTACCTACCTACCTACCTACCTACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTATCTATCTATCTACCTACCTACCTACCTACCTACCTACCTACC  450

seq1  TACCTATATCTCTATCTCTATCTCCCTGGACAACAGCAGGCATGGGATTT  500
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATGTCTCTATCTCTATCTCCCTGGACAACAGCAGGCATGGGATTT  500

seq1  ATATTTTCTTGAATGAGTACTTAGCATGAACTGCAATGAGTATTTATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCTTGAATGAGTACTTAGCATGAACTGCAATGAGTATTTATGAT  550

seq1  GTATTTTGTGACATTTCACAAGTTTGTTATAGCAGCGGTTTTAAAAGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTGTGACATTTCACAAGTTTGTTATAGCAGCGGTTTTAAAAGACA  600

seq1  GTCCCTCCTTCATGGAGAGTGCATTGCATTTTAAAAAAGAACACTTGGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTCCTTCATGGAGAGTGCATTGCATTTTAAAAAAGAACACTTGGTT  650

seq1  TTCTGAAACTTATTTTAGTATCTGCATTATGTAATTGAAATGGGACACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAACTTATTTTAGTATCTGCATTATGTAATTGAAATGGGACACTT  700

seq1  TGTCGTGTATTTCTCTAAGTGACTTGATTTAATTTCTCCTCTTGGGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGTGTATTTCTCTAAGTGACTTGATTTAATTTCTCCTCTTGGGCATT  750

seq1  GATGTTATAAATTTGGCACCTTAGTGCCATAGGATAACCTGCGTTTTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTATAAATTTGGCACCTTAGTGCCATAGGATAACCTGCGTTTTCAC  800

seq1  ATGCTTGAGACAATGAGTGGAGCTCAGAGACGGTGATGCTTAGTCTCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGAGACAATGAGTGGAGCTCAGAGACGGTGATGCTTAGTCTCACC  850

seq1  AAATTTTTCTCCATGTGTCTCATACTCATGCAGTTTTATCAGGAGTTTGT  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AAATTTTTCTCCATGTGTCTCATACTCATGCAGTTTTATCA-GAGTTTGT  899

seq1  GTTAGTGATTTAATCTTCAA-TGACTAATTTTTAGAGTCTTGTTTCCTGA  949
      | |||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  G-TAGTGATTTAATCTTCAATTGACTAATTTTTAGAGTCTTG-TTCCTGA  947

seq1  TATATTAAGCTCTTTTGTATATTCATCCTATTTCCCTTGGGTTCCAGTGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAAGCTCTTTTGTATATTCATCCTATTTCCCTTGGGTTCCAGTGC  997

seq1  ATACATTTCCTGACTAGAATACGGTGCTTTTTAAATGCGCTCACAGGATA  1049
      |||||||||||||||||||||||| |||||||||||||||||||||   |
seq2  ATACATTTCCTGACTAGAATACGG-GCTTTTTAAATGCGCTCACAGATAA  1046

seq1  GCTTTCAAGGGTCTGATTTACCAGCGATA-GCATTTGAGCATGGCAGCCC  1098
      |||||  | | ||||||||| |||||||| ||| |||||||| |||| ||
seq2  GCTTTTCAAGTTCTGATTTA-CAGCGATATGCA-TTGAGCAT-GCAGGCC  1093

seq1  CAGCTGGATGAGGCAGGTATGATCCTGACCTGTAATTGGATACTTGGTCC  1148
      ||||| ||||| ||| ||||||| |||| |||||||| |||||||||| |
seq2  CAGCT-GATGA-GCA-GTATGAT-CTGA-CTGTAATT-GATACTTGGT-C  1136

seq1  TATAACTGTCACTGCTGTCACAAAGTCCTCT-AAGACATAAAT  1190
      |||||||| |||||||||  ||||||||||| |||| ||||||
seq2  TATAACTG-CACTGCTGTTCCAAAGTCCTCTCAAGATATAAAT  1178

seq1: chr1_132197323_132198447
seq2: B6Ng01-120E08.g_68_1186 (reverse)

seq1  GTAATATTTCCAC--AGGAAAGGAGATTAGAGTTAGACATTCAATTTGGC  48
      |||||| ||||||  || |||||||| ||||| |||  |||||||| |||
seq2  GTAATA-TTCCACCGAGAAAAGGAGA-TAGAG-TAGCAATTCAATTGGGC  47

seq1  GGCCAAG-AAGGACCT-AAAACAGCCACTTTCCAAAGAAATGCCCCTTCA  96
       |||||| |||||||| |||||||||||||| ||||||||||||||| ||
seq2  -GCCAAGAAAGGACCTAAAAACAGCCACTTT-CAAAGAAATGCCCCTCCA  95

seq1  CCGGGCTGGTCTAAGTCTACCAGAAAAGACATCCTTCTTGCTTCTTAACA  146
      |||||||||||||||||| |||||||||||| ||||||||||||||||||
seq2  CCGGGCTGGTCTAAGTCT-CCAGAAAAGACA-CCTTCTTGCTTCTTAACA  143

seq1  TAGTCAAGGTAGAAATAGTGCTAATCTCTATGTTGAATAAACATAGTCAA  196
      |||||||||||||||||||||| ||||||||| |||||||||||||||||
seq2  TAGTCAAGGTAGAAATAGTGCT-ATCTCTATG-TGAATAAACATAGTCAA  191

seq1  ATAATTACTTAGGTAATCAAACTAATTAAATAAATATTCAATACCATAAT  246
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAATTACTTAGGTAATCAAACTAA-TAAATAAATATTCAATACCATAAT  240

seq1  TTCACAGAAATAATAGTAATGTGATATGTAAACTGGATTACAGAAATATA  296
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  TTCACAGAAATAATAGTAATGTGATATTTAAACTGGAATACAGAAATATA  290

seq1  CAGTCTATAGGGTGTACATAAACCCCTATTTCTGAGTGAGATTTGCTCTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTATAGGGTGTACATAAACCCCTATTTCTGAGTGAGATTTGCTCTT  340

seq1  TAAGCTCTCTGAATCTCAGTATTTTGTTGTAAAATGGGAATGCCTAGCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCTCTGAATCTCAGTATTTTGTTGTAAAATGGGAATGCCTAGCTC  390

seq1  AGAGAATTTCTGTAAAAGTGAAAGCTAATGATGTATTGTCACATTGGCAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATTTCTGTAAAAGTGAAAGCTAATGATGTATTGTCACATTGGCAT  440

seq1  ACTGGCCAACACCCAGTAAGTCCAAAATAAATGACTACTGGAGGATTTTT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCCAACACCCAGTAAGTCCAAAATAAATGACTACTGGAGGATTTTT  490

seq1  TTTTTCAGGAGGATACTAATAGCCAGTATTGGAAATCTGGAGCCAATTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGGAGGATACTAATAGCCAGTATTGGAAATCTGGAGCCAATTTT  540

seq1  AATCATGCAAGGAAGATAGACTTAAGAACACACAAAACTTGCAGGGCAGT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGCAAGGAAGATAGACTTAAGAACACACAAAACTTGCAGGGCAGT  590

seq1  GGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAAAT  640

seq1  TTCTGAGTTTGAGGCCAGCCTGGTCTACAGAATGAGTTCCAGGACAGCCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGTTTGAGGCCAGCCTGGTCTACAGAATGAGTTCCAGGACAGCCA  690

seq1  GGGCTACACAGAGAAACCCTATTGCAGAAAAAAAAGAAAAAGAAAAAAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACACAGAGAAACCCTATTGCAGAAAAAAAAGAAAAAGAAAAAAAA  740

seq1  AAAAAACCTCAGAAATAATTTTAAAGGTATGTATTCTAGATCTGTAGCAA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACCTCAGAAATAATTTTAAAGGTATGTATTCTAGATCTGTAGCAA  790

seq1  TTGCTTTCCTTTATATGTGAGATTGGACTAGTTTCACAACACAGGGCTCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTCCTTTATATGTGAGATTGGACTAGTTTCACAACACAGGGCTCT  840

seq1  AAAGAAACCTTCCATCACCCAGAAAAGGGTGGGGGCATTTCTGTAACATA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAACCTTCCATCACCCAGAAAAGGGTGGGGGCATTTCTGTAACATA  890

seq1  CAAGAGGAAAGCTGGATTTGCCTCTTTTCTCAGTGCCCACAGGCAGGAGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGAAAGCTGGATTTGCCTCTTTTCTCAGTGCCCACAGGCAGGAGG  940

seq1  GGAACGAATGAGAGAGGAGGTGACCCTGGACTATTTTGTGGCCAATGCAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACGAATGAGAGAGGAGGTGACCCTGGACTATTTTGTGGCCAATGCAC  990

seq1  TGGAATCCCCTTGTCAGCTACAATCAGCACTTCTGCTATTTAGAAAACTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCCCCTTGTCAGCTACAATCAGCACTTCTGCTATTTAGAAAACTG  1040

seq1  TGTACAGCATGCCATTTCCTCTCTGTTATATCCTGTTTTCCCATGGCTTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGCATGCCATTTCCTCTCTGTTATATCCTGTTTTCCCATGGCTTC  1090

seq1  CATAAATTTAGAAGCACTGTAGAGAATTC  1125
      |||||||||||||||||||||||||||||
seq2  CATAAATTTAGAAGCACTGTAGAGAATTC  1119