BAC Information

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BAC

Clone NameB6Ng01-120I14
Chromosome1 (Build37)
Map Location 46,456,804 - 46,573,288
singlet/doubletdoublet
Overlap geneLOC666855
Upstream geneCol5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b
Downstream geneSlc39a10, EG227061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120I14.bB6Ng01-120I14.g
ACCDH924455DH924456
length1,2241,044
definitionDH924455|Mus musculus domesticus DNA, BAC clone: B6Ng01-120I14, 5' end.DH924456|Mus musculus domesticus DNA, BAC clone: B6Ng01-120I14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,572,051 - 46,573,288)(46,456,804 - 46,457,843)
sequence
gaattctatatttagaatagaaaagaattagtatatttaaagacaaaaaa
ttaattaataattagtaaaggccattaaaattgtccaagtctgtttgtat
gaagaataataaaatttctagaaaataaaattaaaaaattgaatctgcta
aaggggatattctctccccaatgtatcatttattttttattctttttccc
cttttattaaacacagattattttctcatacagtataatttgaacacagt
ttcccatttctcaactcctcccagtccctccacacctcttttcccatcta
gattcacttactttctgtctttcattagaaaagaatagccatgcataatt
ttataatcaaaatattaagtaatctaaatctgtccagttggggtttctat
tgctgtgatgtaacatcatgaccagaagcaacttgggaaccaaagggttt
attttatttatacttccacatcatggtccatcatcaaaggacatgagtgc
aagaactgaagagaacaggaaattagaggcaggagcgaaggcagaagtga
tagaggggtgctatttactggcttgctccccatggcttgctctgtcttct
ttcttttagattccaggtccaccaggccaaatgtgtctatcaatcactaa
ttaggaaaatgctttacagactgatattagggaggtagtttctcagttgg
ggctccctcctcttagaggactctagcttgtgtcaagttaacataaaatt
ggctaaaacaaaaccaagtcatgaattacatataagataagcacatactg
catataaaaagaaatcatttagaaatatacaaaaaccatattctctctct
ttttttaatataaaaattaagaataaccactccaaaccccagctagtgat
gcttctactagagggaaaaaaggaagtgaggtgtgatgggggtgagcttc
cagggcagcaatcagaatatccttgttacttacccattgggaatacaatt
ttgtctcacttcttggcccaaagctgacagccttatcatgattcatagat
attacaggaatatttatgtagtcattaaactcaggttcaaacttatgtta
ttctttatcagaaccagcttcatgaagtaaacctgggatgtccaagctct
agtgggatcctgtaatgaattatacctagggatatcataggattagagat
gtgggagatcattggtatgaaaat
gaattcactcagagctaaaaaggatgtctttgctggagactccttgagtt
ttctcccagatttcccttgttccgagcgctcctcagacactgtagtcctc
actgctagcatctctgtgggaatgtgttttgagacaaagctacttctgaa
aaacggaatgttctggtgggtttggctccacagcaccacagagatgctag
cactgggctgcagacacacgtccagaagtgctgtttgcaattgtgatagc
aatcttactaaaaataagggctttttcccccagttcagagaggtgtgggt
agaagacaggctgccgctgtcctccagtctcctgaaggccattcatttcc
tgtaggatgctgatgtttcaaaacctccacatgaattatgggaatttcca
taaatattttttcacttcagcttttgttcttagtggagagtgttgtctgt
agttatcatttttctaaacagtatcttttaaaaatctgaaacatgaagct
ttgtgggtttttctgttttgttttgttttgttttgttttcgtgttttgtt
ttttgttttttttgttttttgaatcaaatctttttttcctgctttgttca
aggcctaggaactttgttgtgggggtcatgtagctatgcacctaggtgta
gttcttaatggctagctctattgtaaggtgacctgaccctagggggtttt
ccttttgaataaaatgtattttttctgcaagtagtcattgttttagctgg
tggattatttttaccactttagaaaggataatctgtttccctttgcatgg
tgcaaagagcttgtctaagttgttcccttgtgtcaagacaactttatctc
tgggctgcaacaatgcttacgaatctgggtggaggtttccattcctcttt
tgaaagacatgttaactttgcttagttttaagataagaaaagcattcatg
ctattttaagtgttcgcctgttgccaaccttgcttgaattcgtcctctcc
aaggctttttggagtcaagaaaactttctaacttgtcagttgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46572051_46573288
seq2: B6Ng01-120I14.b_42_1265 (reverse)

seq1  ATTTTCATTCACAATTGATCT-CCACATCTCTATATCTCTATG-TATACC  48
      ||||||||  || | |||||| ||||||||||| ||| ||||| ||| ||
seq2  ATTTTCAT--ACCAATGATCTCCCACATCTCTA-ATC-CTATGATATCCC  46

seq1  TATGGTTATTTAATTTCATTTTACAGGAATCAACTAGAGCTTTTGAACAT  98
      ||  | |||   | ||||  ||||||||  | ||||||||  ||| ||||
seq2  TA--GGTAT---AATTCA--TTACAGGATCCCACTAGAGC--TTGGACAT  87

seq1  -CCAGGTTT-CATCATGAGGCTGGTTCTTGATAAAG-ATAACATTAGTTT  145
       |||||||| | |||||| |||||||| |||||||| ||||||| || ||
seq2  CCCAGGTTTACTTCATGAAGCTGGTTC-TGATAAAGAATAACATAAG-TT  135

seq1  TGAACCTGAGTTTAATGACTACATAGATATTCTTGTAAATATCTATGAAA  195
      ||||||||||||||||||||||||| |||||| ||| |||||||||| ||
seq2  TGAACCTGAGTTTAATGACTACATAAATATTCCTGT-AATATCTATG-AA  183

seq1  TCATGATTAAGGCTGTCAGCTTTGTGCCAAGAGTTGAGACAAAATTGTAT  245
      |||||| ||||||||||||||||| |||||||  ||||||||||||||||
seq2  TCATGA-TAAGGCTGTCAGCTTTGGGCCAAGAAGTGAGACAAAATTGTAT  232

seq1  TCCCAATGGGTAAGTAACAAGGATATTCTGATTGCTGCCCTGGAAGCTCA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATGGGTAAGTAACAAGGATATTCTGATTGCTGCCCTGGAAGCTCA  282

seq1  CCCCCATCACACCTCACTTCCTTTTTTCCCTCTAGTAGAAGCATCACTAG  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCACACCTCACTTCCTTTTTTCCCTCTAGTAGAAGCATCACTAG  332

seq1  CTGGGGTTTGGAGTGGTTATTCTTAATTTTTATATTAAAAAAAAGAGAGA  395
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CTGGGGTTTGGAGTGGTTATTCTTAATTTTTATATT-AAAAAAAGAGAGA  381

seq1  GAATATGGTTTTTGTATATTTCTAAATGATTTCTTTTTATATGCAGTATG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGGTTTTTGTATATTTCTAAATGATTTCTTTTTATATGCAGTATG  431

seq1  TGCTTATCTTATATGTAATTCATGACTTGGTTTTGTTTTAGCCAATTTTA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTATCTTATATGTAATTCATGACTTGGTTTTGTTTTAGCCAATTTTA  481

seq1  TGTTAACTTGACACAAGCTAGAGTCCTCTAAGAGGAGGGAGCCCCAACTG  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACTTGACACAAGCTAGAGTCCTCTAAGAGGAGGGAGCCCCAACTG  531

seq1  AGAAACTACCTCCCTAATATCAGTCTGTAAAGCATTTTCCTAATTAGTGA  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTACCTCCCTAATATCAGTCTGTAAAGCATTTTCCTAATTAGTGA  581

seq1  TTGATAGACACATTTGGCCTGGTGGACCTGGAATCTAAAAGAAAGAAGAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGACACATTTGGCCTGGTGGACCTGGAATCTAAAAGAAAGAAGAC  631

seq1  AGAGCAAGCCATGGGGAGCAAGCCAGTAAATAGCACCCCTCTATCACTTC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAGCCATGGGGAGCAAGCCAGTAAATAGCACCCCTCTATCACTTC  681

seq1  TGCCTTCGCTCCTGCCTCTAATTTCCTGTTCTCTTCAGTTCTTGCACTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCGCTCCTGCCTCTAATTTCCTGTTCTCTTCAGTTCTTGCACTCA  731

seq1  TGTCCTTTGATGATGGACCATGATGTGGAAGTATAAATAAAATAAACCCT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTGATGATGGACCATGATGTGGAAGTATAAATAAAATAAACCCT  781

seq1  TTGGTTCCCAAGTTGCTTCTGGTCATGATGTTACATCACAGCAATAGAAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCCCAAGTTGCTTCTGGTCATGATGTTACATCACAGCAATAGAAA  831

seq1  CCCCAACTGGACAGATTTAGATTACTTAATATTTTGATTATAAAATTATG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACTGGACAGATTTAGATTACTTAATATTTTGATTATAAAATTATG  881

seq1  CATGGCTATTCTTTTCTAATGAAAGACAGAAAGTAAGTGAATCTAGATGG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCTATTCTTTTCTAATGAAAGACAGAAAGTAAGTGAATCTAGATGG  931

seq1  GAAAAGAGGTGTGGAGGGACTGGGAGGAGTTGAGAAATGGGAAACTGTGT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGGTGTGGAGGGACTGGGAGGAGTTGAGAAATGGGAAACTGTGT  981

seq1  TCAAATTATACTGTATGAGAAAATAATCTGTGTTTAATAAAAGGGGAAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTATACTGTATGAGAAAATAATCTGTGTTTAATAAAAGGGGAAAA  1031

seq1  AGAATAAAAAATAAATGATACATTGGGGAGAGAATATCCCCTTTAGCAGA  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAAAATAAATGATACATTGGGGAGAGAATATCCCCTTTAGCAGA  1081

seq1  TTCAATTTTTTAATTTTATTTTCTAGAAATTTTATTATTCTTCATACAAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTTTTAATTTTATTTTCTAGAAATTTTATTATTCTTCATACAAA  1131

seq1  CAGACTTGGACAATTTTAATGGCCTTTACTAATTATTAATTAATTTTTTG  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTGGACAATTTTAATGGCCTTTACTAATTATTAATTAATTTTTTG  1181

seq1  TCTTTAAATATACTAATTCTTTTCTATTCTAAATATAGAATTC  1238
      |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAAATATACTAATTCTTTTCTATTCTAAATATAGAATTC  1224

seq1: chr1_46456804_46457843
seq2: B6Ng01-120I14.g_70_1113

seq1  GAATTCACTCAGAGCTAAAAAGGATGTCTTTGCTGGAGACTCCTTGAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAGAGCTAAAAAGGATGTCTTTGCTGGAGACTCCTTGAGTT  50

seq1  TTCTCCCAGATTTCCCTTGTTCCGAGCGCTCCTCAGACACTGTAGTCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAGATTTCCCTTGTTCCGAGCGCTCCTCAGACACTGTAGTCCTC  100

seq1  ACTGCTAGCATCTCTGTGGGAATGTGTTTTGAGACAAAGCTACTTCTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTAGCATCTCTGTGGGAATGTGTTTTGAGACAAAGCTACTTCTGAA  150

seq1  AAACGGAATGTTCTGGTGGGTTTGGCTCCACAGCACCACAGAGATGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGAATGTTCTGGTGGGTTTGGCTCCACAGCACCACAGAGATGCTAG  200

seq1  CACTGGGCTGCAGACACACGTCCAGAAGTGCTGTTTGCAATTGTGATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCTGCAGACACACGTCCAGAAGTGCTGTTTGCAATTGTGATAGC  250

seq1  AATCTTACTAAAAATAAGGGCTTTTTCCCCCAGTTCAGAGAGGTGTGGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTACTAAAAATAAGGGCTTTTTCCCCCAGTTCAGAGAGGTGTGGGT  300

seq1  AGAAGACAGGCTGCCGCTGTCCTCCAGTCTCCTGAAGGCCATTCATTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACAGGCTGCCGCTGTCCTCCAGTCTCCTGAAGGCCATTCATTTCC  350

seq1  TGTAGGATGCTGATGTTTCAAAACCTCCACATGAATTATGGGAATTTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGATGCTGATGTTTCAAAACCTCCACATGAATTATGGGAATTTCCA  400

seq1  TAAATATTTTTTCACTTCAGCTTTTGTTCTTAGTGGAGAGTGTTGTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTTTTTCACTTCAGCTTTTGTTCTTAGTGGAGAGTGTTGTCTGT  450

seq1  AGTTATCATTTTTCTAAACAGTATCTTTTAAAAATCTGAAACATGAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCATTTTTCTAAACAGTATCTTTTAAAAATCTGAAACATGAAGCT  500

seq1  TTGTGGGTTTTTCTGTTTTGTTTTGTTTTGTTTTGTTTTCGTGTTTTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGGTTTTTCTGTTTTGTTTTGTTTTGTTTTGTTTTCGTGTTTTGTT  550

seq1  TTTTG-TTTTTTTGTTTTTTGAATCAAATCTTTTTTTCCTGCTTTGTTCA  599
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTGTTTTTTGAATCAAATCTTTTTTTCCTGCTTTGTTCA  600

seq1  AGGCCTAGGAACTTTGTTGTGGGGGTCATGTAGCTATGCACCTAGGTGTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTAGGAACTTTGTTGTGGGGGTCATGTAGCTATGCACCTAGGTGTA  650

seq1  GTTCTTAATGGCTAGCTCTATTGTAAGGTGACCTGACCCTAGGGGGTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTAATGGCTAGCTCTATTGTAAGGTGACCTGACCCTAGGGGGTTTT  700

seq1  CCTTTTGAAT-AAATGTATTTTTTCTGCAGGTAGTCATTGTTTTAGCTGG  748
      |||||||||| |||||||||||||||||| ||||||||||||||||||||
seq2  CCTTTTGAATAAAATGTATTTTTTCTGCAAGTAGTCATTGTTTTAGCTGG  750

seq1  TGGATTA-TTTTACCAC-TTAG-AAGGATAA-CTG-TTCCCTTTGCATGG  793
      ||||||| ||||||||| |||| |||||||| ||| ||||||||||||||
seq2  TGGATTATTTTTACCACTTTAGAAAGGATAATCTGTTTCCCTTTGCATGG  800

seq1  TGCAAAGAGCTTGTCTAAGTTG-TCCCTTGTGTCAAGACAAC-TTATCTC  841
      |||||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  TGCAAAGAGCTTGTCTAAGTTGTTCCCTTGTGTCAAGACAACTTTATCTC  850

seq1  TGGGCTGCAGCAATGCTTACGAATCTGGGTGGAGGTTTTCATTCCTCTTT  891
      ||||||||| |||||||||||||||||||||||||||| |||||||||||
seq2  TGGGCTGCAACAATGCTTACGAATCTGGGTGGAGGTTTCCATTCCTCTTT  900

seq1  TGAAGACCATGTTAACATTTGCATAGTTTTAAGGATAAGAAAAGCA-TCA  940
      ||||   ||||||||| ||||| ||||||||| ||||||||||||| |||
seq2  TGAAAGACATGTTAAC-TTTGCTTAGTTTTAA-GATAAGAAAAGCATTCA  948

seq1  TGCTATTTGAAGTGGTTCGCCTGTTGCCCAACCCTTGCTGGATTCTGTCC  990
      |||||||| |||| ||||||||||||||  | ||||||| || |  ||||
seq2  TGCTATTTTAAGT-GTTCGCCTGTTGCC--AACCTTGCTTGAATTCGTCC  995

seq1  TCTCCAAGGCTTTATGGAGTCAAGTAAAACTTTCATACTTGTCAGTTGAC  1040
      ||||||||||||| |||||||||| |||||||||  ||||||||||||||
seq2  TCTCCAAGGCTTTTTGGAGTCAAG-AAAACTTTCTAACTTGTCAGTTGAC  1044