BAC Information

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BAC

Clone NameB6Ng01-120K03
Chromosome1 (Build37)
Map Location 76,216,101 - 76,407,377
singlet/doubletdoublet
Overlap genenone
Upstream geneA630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream geneLOC100039137, Tfdp1-ps, Epha4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120K03.bB6Ng01-120K03.g
ACCDH924529DH924530
length1,1241,068
definitionDH924529|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K03, 5' end.DH924530|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,406,246 - 76,407,377)(76,216,101 - 76,217,184)
sequence
gaattcattatgcagtgaaatatgtacgaccccattgatgtgatggggaa
gaaaagtaatatagatttttttcagccagttagagaggagggaatataac
aaatataatagaagacagaacaaactgaacactactgatagaaaaataag
caatatggcaagggagcctagaggatatggagatgaatgtttggggatga
attagatgccaaactatctcccaatttttaattcatggcagctctcacta
tgagctggaaatgtcaaattttaaaagtacttttgccagcttagagtagc
aaaggagaaggtatgtgtgcagagagggtcacaaaatgagaggccacaca
aaccttcaccagtcaactgctagacatgacatccatcttccactgaattt
gcccgtgtttcacccaggaggacagagtctttgaaacactgacaccaaga
ggtttccatcctcatgttaaaactgcatagaaaatccaaaagaaatcagg
cagtgttctcaaagtagtcaaactggtaattgtgtcctgagctattctgt
gttccaataggaatgtctacatattagataattagaaattgtgttaaaat
gaagagtctccttccatagaccagagactggacgattctgaatttgtcac
aagctcctctgatatgcctatattatactttcagttagaaagaagtcctt
aggtatatactaagtttacaggctggtaccagaataatgtagcaattgtg
gtccagctcttaaaccaaatgactactgactgatgagagaaaaaaatctt
gaaagcagatctccatggtgacttacagtgagtaatatattctacccaac
ccactgcatgactgaaatatttacataataaaatgctccaagagacacat
gcacatatgtgccccatgacatcagcatatttcaaataagtacttaattt
taactatgtttgctcatatgtattctatcttattgatataaaggctttct
gatttcttctttgaggtattcaaatgaaactatgatttcagtatctttct
acctctgaaatagttctaatagttgacatctccagaggatcatcaagaat
aaatctcattttataggcttggga
gaattctgaactcttcggatgaagctggtttggaaatgaaaacttcgcta
catccacccatggaagctgatctattcctgagaaatgtgtttgactgtca
acgagagtgggcgtgcgactgtcaagtcagctttctgaaatgacaagggg
ataagattggcattctgtgtcttcctgactgatgttaattattcctttgg
ttggagtgaatacaacttttgttctaaagtagttaatgatagccttctta
ttgccccttttaattccatgagggacatatctgcattaaaaaaattccat
tacatatacatctgtggttactctcttatttttctaaatgtaattatcca
gctaggctaaattatggaaaagaaattataaaaatcttttcctgccaact
gaatctggccagcacattctgttggtttggatgttgggaatagtttcttt
ttattccttcttattccctgctcccgagacccacccccacccaatccttt
aaaacccaacacactttttagtgagattgatttttctcaaaggtgtttcc
ttgggcaggctcccattgccaagaacatatctgtatacattctgcaggaa
tgtggtattataactttcatattaattttgagttattgttgcacagaaaa
caagaatacacatggtagcttttatgcattatgagttattcacagagtga
aatcacatttaaaattataactgggatttaggaatgtggtattaactagg
ctaagtaatacataatctatttttagtgagagtaaaaataattgtaacaa
ttctggagaaaattggcttatgctaaaaggggcttaggtagagagctggc
agttaaagaataaaagactctaaattgtttgtggttgttcactggtcaca
gaacctgtgcagcgtggctctcaagtataatgacaggagtgtcaggactc
ggctgctcctgaatggtactgacatgtgagccaatgggaactgaaacagg
cgagtgccttccaccttaagaggacacccaatgctttgcaaatctcaggg
atgatcaattagagggcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_76406246_76407377
seq2: B6Ng01-120K03.b_46_1169 (reverse)

seq1  TCCCATGCCT-TAAAATGTAGATTTA-TCTTGATTGATCCTTCCTGG-GA  47
      ||||| |||| ||||||| ||||||| |||||| |||||||  |||| ||
seq2  TCCCAAGCCTATAAAATG-AGATTTATTCTTGA-TGATCCT--CTGGAGA  46

seq1  TGTCAACTATTTAGAACTATTTACAGAGTATGAAAGATACTGAAATACAT  97
      ||||||||| |||||||||||| |||||   ||||||||||||||| |||
seq2  TGTCAACTA-TTAGAACTATTT-CAGAGGTAGAAAGATACTGAAAT-CAT  93

seq1  AGTTTCATTTTGAATACCTCAAAGAAGAAATCAGAAAGCCTTTATATCAA  147
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCA-TTTGAATACCTCAAAGAAGAAATCAGAAAGCCTTTATATCAA  142

seq1  ATAAAGATAAGAATACATATGAGCAAACATAGTTAAAATTAAGTACTTAT  197
         ||||| |||||||||||||||||||||||||||||||||||||||||
seq2  --TAAGAT-AGAATACATATGAGCAAACATAGTTAAAATTAAGTACTTAT  189

seq1  TTGAAATATGCTGATGTCATGGGGCACATATGTGCATGTGTCTCTTGGAG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATATGCTGATGTCATGGGGCACATATGTGCATGTGTCTCTTGGAG  239

seq1  CATTTTATTATGTAAATATTTCAGTCATGCAGTGGGTTGGGTAGAATATA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATTATGTAAATATTTCAGTCATGCAGTGGGTTGGGTAGAATATA  289

seq1  TTACTCACTGTAAGTCACCATGGAGATCTGCTTTCAAGATTTTTTTCTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTCACTGTAAGTCACCATGGAGATCTGCTTTCAAGATTTTTTTCTCT  339

seq1  CATCAGTCAGTAGTCATTTGGTTTAAGAGCTGGACCACAATTGCTACATT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGTCAGTAGTCATTTGGTTTAAGAGCTGGACCACAATTGCTACATT  389

seq1  ATTCTGGTACCAGCCTGTAAACTTAGTATATACCTAAGGACTTCTTTCTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGGTACCAGCCTGTAAACTTAGTATATACCTAAGGACTTCTTTCTA  439

seq1  ACTGAAAGTATAATATAGGCATATCAGAGGAGCTTGTGACAAATTCAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAGTATAATATAGGCATATCAGAGGAGCTTGTGACAAATTCAGAA  489

seq1  TCGTCCAGTCTCTGGTCTATGGAAGGAGACTCTTCATTTTAACACAATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCCAGTCTCTGGTCTATGGAAGGAGACTCTTCATTTTAACACAATTT  539

seq1  CTAATTATCTAATATGTAGACATTCCTATTGGAACACAGAATAGCTCAGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATCTAATATGTAGACATTCCTATTGGAACACAGAATAGCTCAGG  589

seq1  ACACAATTACCAGTTTGACTACTTTGAGAACACTGCCTGATTTCTTTTGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATTACCAGTTTGACTACTTTGAGAACACTGCCTGATTTCTTTTGG  639

seq1  ATTTTCTATGCAGTTTTAACATGAGGATGGAAACCTCTTGGTGTCAGTGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTATGCAGTTTTAACATGAGGATGGAAACCTCTTGGTGTCAGTGT  689

seq1  TTCAAAGACTCTGTCCTCCTGGGTGAAACACGGGCAAATTCAGTGGAAGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGACTCTGTCCTCCTGGGTGAAACACGGGCAAATTCAGTGGAAGA  739

seq1  TGGATGTCATGTCTAGCAGTTGACTGGTGAAGGTTTGTGTGGCCTCTCAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTCATGTCTAGCAGTTGACTGGTGAAGGTTTGTGTGGCCTCTCAT  789

seq1  TTTGTGACCCTCTCTGCACACATACCTTCTCCTTTGCTACTCTAAGCTGG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGACCCTCTCTGCACACATACCTTCTCCTTTGCTACTCTAAGCTGG  839

seq1  CAAAAGTACTTTTAAAATTTGACATTTCCAGCTCATAGTGAGAGCTGCCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTACTTTTAAAATTTGACATTTCCAGCTCATAGTGAGAGCTGCCA  889

seq1  TGAATTAAAAATTGGGAGATAGTTTGGCATCTAATTCATCCCCAAACATT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAAAAATTGGGAGATAGTTTGGCATCTAATTCATCCCCAAACATT  939

seq1  CATCTCCATATCCTCTAGGCTCCCTTGCCATATTGCTTATTTTTCTATCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCATATCCTCTAGGCTCCCTTGCCATATTGCTTATTTTTCTATCA  989

seq1  GTAGTGTTCAGTTTGTTCTGTCTTCTATTATATTTGTTATATTCCCTCCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTTCAGTTTGTTCTGTCTTCTATTATATTTGTTATATTCCCTCCT  1039

seq1  CTCTAACTGGCTGAAAAAAATCTATATTACTTTTCTTCCCCATCACATCA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACTGGCTGAAAAAAATCTATATTACTTTTCTTCCCCATCACATCA  1089

seq1  ATGGGGTCGTACATATTTCACTGCATAATGAATTC  1132
      |||||||||||||||||||||||||||||||||||
seq2  ATGGGGTCGTACATATTTCACTGCATAATGAATTC  1124

seq1: chr1_76216101_76217184
seq2: B6Ng01-120K03.g_68_1135

seq1  GAATTCTGAACTCTTCGGATGAAGCTGGTTTGGAAATGAAAACTTCGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGAACTCTTCGGATGAAGCTGGTTTGGAAATGAAAACTTCGCTA  50

seq1  CATCCACCCATGGAAGCTGATCTATTCCTGAGAAATGTGTTTGACTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCACCCATGGAAGCTGATCTATTCCTGAGAAATGTGTTTGACTGTCA  100

seq1  ACGAGAGTGGGCGTGCGACTGTCAAGTCAGCTTTCTGAAATGACAAGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAGTGGGCGTGCGACTGTCAAGTCAGCTTTCTGAAATGACAAGGGG  150

seq1  ATAAGATTGGCATTCTGTGTCTTCCTGACTGATGTTAATTATTCCTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGATTGGCATTCTGTGTCTTCCTGACTGATGTTAATTATTCCTTTGG  200

seq1  TTGGAGTGAATACAACTTTTGTTCTAAAGTAGTTAATGATAGCCTTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTGAATACAACTTTTGTTCTAAAGTAGTTAATGATAGCCTTCTTA  250

seq1  TTGCCCCTTTTAATTCCATGAGGGACATATCTGCATTAAAAAAATTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCCTTTTAATTCCATGAGGGACATATCTGCATTAAAAAAATTCCAT  300

seq1  TACATATACATCTGTGGTTACTCTCTTATTTTTCTAAATGTAATTATCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATACATCTGTGGTTACTCTCTTATTTTTCTAAATGTAATTATCCA  350

seq1  GCTAGGCTAAATTATGGAAAAGAAATTATAAAAATCTTTTCCTGCCAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCTAAATTATGGAAAAGAAATTATAAAAATCTTTTCCTGCCAACT  400

seq1  GAATCTGGCCAGCACATTCTGTTGGTTTGGATGTTGGGAATAGTTTCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTGGCCAGCACATTCTGTTGGTTTGGATGTTGGGAATAGTTTCTTT  450

seq1  TTATTCCTTCTTATTCCCTGCTCCCGAGACCCACCCCCACCCAATCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCCTTCTTATTCCCTGCTCCCGAGACCCACCCCCACCCAATCCTTT  500

seq1  AAAACCCAACACACTTTTTAGTGAGATTGATTTTTCTCAAAGGTGTTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCAACACACTTTTTAGTGAGATTGATTTTTCTCAAAGGTGTTTCC  550

seq1  TTGGGCAGGCTCCCATTGCCAAGAACATATCTGTATACATTCTGCAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCAGGCTCCCATTGCCAAGAACATATCTGTATACATTCTGCAGGAA  600

seq1  TGTGGTATTATAACTTTCATATTAATTTTGAGTTATTGTTGCACAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTATTATAACTTTCATATTAATTTTGAGTTATTGTTGCACAGAAAA  650

seq1  CAAGAATACACATGGTAGCTTTTATGCATTATGAGTTATTCACAGAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATACACATGGTAGCTTTTATGCATTATGAGTTATTCACAGAGTGA  700

seq1  AATCACATTTAAAATTATAACTGGGATTTAGGAATGTGGTATTAACTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACATTTAAAATTATAACTGGGATTTAGGAATGTGGTATTAACTAGG  750

seq1  CTAAGTAATACATAATCTATTTTTAGTGAGAGTAAAAATAATTGTAACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTAATACATAATCTATTTTTAGTGAGAGTAAAAATAATTGTAACAA  800

seq1  TTCTGGAGAAAATTGGCTTATGCTAAAAGGGGCTTAGGTAGAGAGCTGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGAAAATTGGCTTATGCTAAAAGGGGCTTAGGTAGAGAGCTGGC  850

seq1  AGTTAAAGAATAAAAGACTCTAAATTGTTTGTGGTTGTTCACTTGGTCAC  900
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGTTAAAGAATAAAAGACTCTAAATTGTTTGTGGTTGTTCAC-TGGTCAC  899

seq1  AGAACCTGTGCAGCGTGGCTCTCAAGTATTAATGACAGGAGTGTACAGGA  950
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  AGAACCTGTGCAGCGTGGCTCTCAAGTA-TAATGACAGGAGTGT-CAGGA  947

seq1  CTCGGCTGCTCCTGAATGGTAACTGACAATGTGCAGCACATGGGAACTGA  1000
      |||||||||||||||||||| |||||| ||||| |||  |||||||||||
seq2  CTCGGCTGCTCCTGAATGGT-ACTGAC-ATGTG-AGCCAATGGGAACTGA  994

seq1  AACGTGCGAGTGCCTTCCAACCTAGAGA-GACACCCCAAATTGCTTTGCA  1049
      |||  ||||||||||||| ||||  ||| |||||||   | |||||||||
seq2  AACAGGCGAGTGCCTTCC-ACCTTAAGAGGACACCC---AATGCTTTGCA  1040

seq1  AAATCCTCAGGAGATGAGTACAAATTAAGAGGGCC  1084
      ||   |||||| |||||   |||  | ||||||||
seq2  AA--TCTCAGG-GATGA--TCAA--TTAGAGGGCC  1068