BAC Information

Click to search

BAC

Clone NameB6Ng01-120O14
Chromosome1 (Build37)
Map Location 75,926,299 - 75,927,386
singlet/doubletsinglet
Overlap genenone
Upstream geneFev, Cryba2, Ccdc108, Ihh, Nhej1, Slc23a3, 1810031K17Rik, BC038286, Zfand2b, Abcb6, Atg9a, D1Ertd161e, Stk16, Tuba4a, A630095N17Rik, Dnajb10, Ptprn, Resp18, Dnpep, Des, Speg, Gmppa, Accn4, D1Bwg1363e, A230078I05Rik, AW822216, Inha, Stk11ip, Slc4a3, LOC100039069, LOC383531
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O14.bB6Ng01-120O14.g
ACCDH924730DH924731
length1,2161,085
definitionDH924730|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O14, 5' end.DH924731|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgatggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttatcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaaattgctccttccaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttatttcttttcttcagagatttgaagtttttatcat
acagatctttcacctccttagttagagtcacgccaagatattttatatta
tttgtgactatgagaaggtgttgtttccctaatttctttctcagctgtta
tctttgtgtagaagaaaggccatgacttgtttgagtaattttatatccag
ctactcaccggaagctgtatcagtaaggagtctctgttagaattttaagg
tacctaatatactatcatatcaatctgcaaaaggatattgggactcctct
ttccattgatcctgggatcccttgtgccaatgctctggcatatacctcag
ataccatgtgtgaatg
gaattcattggtttggccaggccgagcagccaccaagccccagtgatgcc
cctatccctgcttccccagcactgggttaaaggctccactgtatctggct
ttttatgcaattgctgagaatctgaacccaagtctgcttgcttggacagc
taactaaaccatctcctcaccctgccctgttgttatcttaagtcctgcca
gggtaggacctcttctcaaagcatgactgtgggcctactggataccacct
cccaaagtgtgactgtgagcctactggataccagctgtaaagggcaaaac
aaagccaggcccatgccctgtagaagtcactgggaaaaaggaatatttgc
ttgagtcactctctggtcaaaaaagggacagaggtgagctaagtatgata
tctcaggcaaaaggaccctggggatgatgtcgctttgagggtaggaagag
tagattacataaggagatcctgatataagtgtgcaacccccatacataaa
cacacactcacacacagacagacagactgacacacacacacacacacaga
gacagagacagagagacagagagagaaacagagacagagacatagataga
cagagagacagacagacagagagactcagaagcactaacgactcagggag
aggtgaatcctcaggcccccctgatagacagtgcgtggagctagtatgcc
ccagtagctctagggctgtcttaaaaagaagagtctcagatgtgtgtgca
tggaaaccaaaggtgcactcctacctctggagatgtgaaacacgaataca
ctcccctattcaaggcaatttcaaaagacaaagccaagcaagatgctgtg
ccagccctagtggtccttgagccttccctattctggagagcagcaaggag
tgaaagggctcttgagcttttcatgctagttagactcattacggtaaaga
atggggaaggctaaagggtcaagtacactacttatagacgctaccattat
agagaatacctccgagatgctgtgctcctaagatgccagaccactgatta
gaccacggtgtggttccagaccttttcataccctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_75926299_75927386
seq2: B6Ng01-120O14.g_68_1152

seq1  GAATTCATTGGTTTGGCCAGGCCGAGCAGCCACCAAGCCCCAGTGATGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGGTTTGGCCAGGCCGAGCAGCCACCAAGCCCCAGTGATGCC  50

seq1  CCTATCCCTGCTTCCCCAGCACTGGGTTAAAGGCTCCACTGTATCTGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCCCTGCTTCCCCAGCACTGGGTTAAAGGCTCCACTGTATCTGGCT  100

seq1  TTTTATGCAATTGCTGAGAATCTGAACCCAAGTCTGCTTGCTTGGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGCAATTGCTGAGAATCTGAACCCAAGTCTGCTTGCTTGGACAGC  150

seq1  TAACTAAACCATCTCCTCACCCTGCCCTGTTGTTATCTTAAGTCCTGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTAAACCATCTCCTCACCCTGCCCTGTTGTTATCTTAAGTCCTGCCA  200

seq1  GGGTAGGACCTCTTCTCAAAGCATGACTGTGGGCCTACTGGATACCACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGACCTCTTCTCAAAGCATGACTGTGGGCCTACTGGATACCACCT  250

seq1  CCCAAAGTGTGACTGTGAGCCTACTGGATACCAGCTGTAAAGGGCAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGTGTGACTGTGAGCCTACTGGATACCAGCTGTAAAGGGCAAAAC  300

seq1  AAAGCCAGGCCCATGCCCTGTAGAAGTCACTGGGAAAAAGGAATATTTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAGGCCCATGCCCTGTAGAAGTCACTGGGAAAAAGGAATATTTGC  350

seq1  TTGAGTCACTCTCTGGTCAAAAAAGGGACAGAGGTGAGCTAAGTATGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTCACTCTCTGGTCAAAAAAGGGACAGAGGTGAGCTAAGTATGATA  400

seq1  TCTCAGGCAAAAGGACCCTGGGGATGATGTCGCTTTGAGGGTAGGAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGCAAAAGGACCCTGGGGATGATGTCGCTTTGAGGGTAGGAAGAG  450

seq1  TAGATTACATAAGGAGATCCTGATATAAGTGTGCAACCCCCATACATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTACATAAGGAGATCCTGATATAAGTGTGCAACCCCCATACATAAA  500

seq1  CACACACTCACACACAGACAGACAGACTGACACACACACACACACACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACTCACACACAGACAGACAGACTGACACACACACACACACACAGA  550

seq1  GACAGAGACAGAGAGACAGAGAGAGAAACAGAGACAGAGACATAGATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACAGAGAGACAGAGAGAGAAACAGAGACAGAGACATAGATAGA  600

seq1  CAGAGAGACAGACAGACAGAGAGACTCAGAAGCACTAACGACTCAGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGACAGACAGACAGAGAGACTCAGAAGCACTAACGACTCAGGGAG  650

seq1  AGGTGAATCCTCAGGCCCCCCTGATAGACAGTGCGTGGAGCTAGTATGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGAATCCTCAGGCCCCCCTGATAGACAGTGCGTGGAGCTAGTATGCC  700

seq1  CCAGTAGCTCTAGGGCTGTCTTAAAAAGAAGAGTCTCAGATGTGTGTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTAGCTCTAGGGCTGTCTTAAAAAGAAGAGTCTCAGATGTGTGTGCA  750

seq1  TGGAAACCAAAGGTGCACTCCTACCTCTGGAGATGTGAAACACGAATACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAACCAAAGGTGCACTCCTACCTCTGGAGATGTGAAACACGAATACA  800

seq1  CTCCCCTATTCAAGGCAATTTCAAAAGACAAAGCCAAGCAAGATGCTGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTATTCAAGGCAATTTCAAAAGACAAAGCCAAGCAAGATGCTGTG  850

seq1  CCAG-CCTAGTGGTCCTTGAGCCTTCCCTATTCTGGAGAGCAGCAAGGAG  899
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCCTAGTGGTCCTTGAGCCTTCCCTATTCTGGAGAGCAGCAAGGAG  900

seq1  TG-AAGGGCCCTTGAGCTCTTCATGCTAGTTAGACTCATTACGGTAAAGA  948
      || |||||| |||||||| |||||||||||||||||||||||||||||||
seq2  TGAAAGGGCTCTTGAGCTTTTCATGCTAGTTAGACTCATTACGGTAAAGA  950

seq1  ATGGGGAAGGGCTAAAGGGTCAGGTACACTACTTATAGACGCTACCATTA  998
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  ATGGGGAA-GGCTAAAGGGTCAAGTACACTACTTATAGACGCTACCATTA  999

seq1  TAGAG-ATAACTCCGGGAGATGCTGTGCTCCTAAGATGCCAGACCCACTG  1047
      ||||| ||| ||||  ||||||||||||||||||||||||||| ||||||
seq2  TAGAGAATACCTCC--GAGATGCTGTGCTCCTAAGATGCCAGA-CCACTG  1046

seq1  AATTATGACCACGGTGTGGTTCCAGAACCTTTCATACCCTG  1088
       |||| |||||||||||||||||||| | ||||||||||||
seq2  -ATTA-GACCACGGTGTGGTTCCAGACCTTTTCATACCCTG  1085