BAC Information

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BAC

Clone NameB6Ng01-120O16
Chromosome1 (Build37)
Map Location 146,266,126 - 146,267,173
singlet/doubletsinglet
Overlap genenone
Upstream geneCdc73, B3galt2, LOC623138, Glrx2, Trove2, Uchl5, Rgs2, Rgs13, Rbm6-ps2, Rgs1, EG639456
Downstream geneRgs21, Rgs18, LOC667877, LOC625057, LOC383570
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O16.bB6Ng01-120O16.g
ACCDH924734DH924735
length1,2381,125
definitionDH924734|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O16, 5' end.DH924735|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctctccaatacttttaaaatgaagtggtgttgtattttg
tcaaatgcttttcctgcatctatggagatgatcatatgattttattcttt
aagtttgtttatataggggattatgataatggattttcgtatactatact
aaccttgcattcctggtatggagcctacttgatcatggtgaatgatggtt
ttgatgtgttcttggataaggtttgtgagaattttattgagtacttttgc
atcgatatttataagtgtgtttggtctgaagttcttttttttggttgggt
ccttgtgtggtttaggtatcagagtaattgttgcttcatagtatgagtta
ggtattgttccttctgtttctattttatggaatagtttgagaaatactga
tatcacgtcttctttgaagatctggaagaattctgaactaaatccctctg
gccctgggcttttttaggttggaaggtttttaatgacttcttctatttct
ttattggatatgggcctgtttagatagtttacctgctcttgatttaactt
tggtatgtggtacctgtctagaaacccatccatctcatctcaattcaaat
tctattaaagaaatgtctagaatttaaaatgagcaatatgtgaaaatgta
tacttgcttgtctaaagaattgctgcattgcaatgctgaaattctgaatc
ctggatagaatggagtgaggctgctcatttatatcatgcttaaattttaa
gaaataaatctatgattccagggcaaatacaaaaaagtcagcaaaactgt
tttacttattatggagttaagctctttaaaaaaactaagaagaagaaata
ctaaatgatttacacccaagttgaaaatgcaggtaaaactggcaaatgta
tttgagagtatgcaactttaaccttcagtttacctgacaggcttgactag
ttggtaaacagtttatacttatcagtctacatgtaccatctaccctaatc
taaatctggtcacatgcaagtaaaggttagttcattcctgtgtttcatga
gggtgaatttctacaagttcggatgataatatttagtattggagccctta
aattccttatacctcacgttatgtctttttctctgagaaaaattggtaaa
ctgtagcacatcctcatccgtaccatcactgaattgtttgattgactcta
gtctcatgagaactacccctacaacataggttgatact
gaattcattccaaaaaggagtacacagcaagaagtatagaacacagggct
gaaatcaataacatagagacaaactgacaaacaaccaacaaactataaag
aatcaataaaacagagttggttctttgacaaaataaaaaatattcacaaa
acattattcaaattaactaaaaggcagaaggagacaaaggggtgggagca
cacataacaacagacactgaggaaatccagggactcttaaggacataatt
taaaattctctttgccagatagaaaaaaatctaaaagaaatgtataatta
tgaaatatagcacacaccaaagttaaatcagtatcagataagcaatttaa
atagacatataacccccagtgaaatagaagcagtaatttaaagtctaaaa
attggttttagagctggaaggagaagtgggcacagaactctactcctaac
ctagaagcaaactccaactgataaccacttgcaaatgaaaatttagtttt
ttccaagggagtctctctggggaaacaaaaggataggctgcatgcccagc
agtagacacaaacagaaaatgaactcagctgaatttttggaggctccttg
ctaataaatttcccgatagctgttcctttaaaattattttcttttatata
ctatatttatttttattataattatgtttacttttttctattaccacaca
ggtcctctgtatatatagtatggcttcaaagaaatcactccaaataccca
tagaaacctaatgtttgacaaagaaaccagaaatacaaactggttaaatg
acagcatgttcaacacgcagtcctggtaaactggatggttacatatagac
aaatgcaaatagatccacattcatcatcatgcacaaatctcactttgaat
gcatcaaagatatcacataaggcaggatacactgacttagagatgatagt
gagatagtctcaactcagcacaaaaaggtttctgaacagaacactgattg
cattggcactagatcacagtaataatagactcatgaaactgaaaacttct
gcagcaagaacaacatcatgcgaataacgcgacaataaattgaaaaaata
accaccctatctctgactgtgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_146266126_146267173
seq2: B6Ng01-120O16.g_176_1192

seq1  AAACAGAGTTGGTTCTTTGACAAAATAAAAAATATTCACAAAACATTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAGTTGGTTCTTTGACAAAATAAAAAATATTCACAAAACATTATT  50

seq1  CAAATTAACTAAAAGGCAGAAGGAGACAAAGGGGTGGGAGCACACATAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATTAACTAAAAGGCAGAAGGAGACAAAGGGGTGGGAGCACACATAAC  100

seq1  AACAGACACTGAGGAAATCCAGGGACTCTTAAGGACATAATTTAAAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACACTGAGGAAATCCAGGGACTCTTAAGGACATAATTTAAAATTC  150

seq1  TCTTTGCCAGATAGAAAAAAATCTAAAAGAAATGTATAATTATGAAATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCAGATAGAAAAAAATCTAAAAGAAATGTATAATTATGAAATAT  200

seq1  AGCACACACCAAAGTTAAATCAGTATCAGATAAGCAATTTAAATAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACACACCAAAGTTAAATCAGTATCAGATAAGCAATTTAAATAGACAT  250

seq1  ATAACCCCCAGTGAAATAGAAGCAGTAATTTAAAGTCTAAAAATTGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCCCCAGTGAAATAGAAGCAGTAATTTAAAGTCTAAAAATTGGTTT  300

seq1  TAGAGCTGGAAGGAGAAGTGGGCACAGAACTCTACTCCTAACCTAGAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGCTGGAAGGAGAAGTGGGCACAGAACTCTACTCCTAACCTAGAAGC  350

seq1  AAACTCCAACTGATAACCACTTGCAAATGAAAATTTAGTTTTTTCCAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCCAACTGATAACCACTTGCAAATGAAAATTTAGTTTTTTCCAAGG  400

seq1  GAGTCTCTCTGGGGAAACAAAAGGATAGGCTGCATGCCCAGCAGTAGACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCTCTGGGGAAACAAAAGGATAGGCTGCATGCCCAGCAGTAGACA  450

seq1  CAAACAGAAAATGAACTCAGCTGAATTTTTGGAGGCTCCTTGCTAATAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGAAAATGAACTCAGCTGAATTTTTGGAGGCTCCTTGCTAATAAA  500

seq1  TTTCCCGATAGCTGTTCCTTTAAAATTATTTTCTTTTATATACTATATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCGATAGCTGTTCCTTTAAAATTATTTTCTTTTATATACTATATTT  550

seq1  ATTTTTATTATAATTATGTTTACTTTTTTCTATTACCACACAGGTCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTATTATAATTATGTTTACTTTTTTCTATTACCACACAGGTCCTCT  600

seq1  GTATATATAGTATGGCTTCAAAGAAATCACTCCAAATACCCATAGAAACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATAGTATGGCTTCAAAGAAATCACTCCAAATACCCATAGAAACC  650

seq1  TAATGTTTGACAAAGAAACCAGAAATACAAACTGGTTAAATGACAGCATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTGACAAAGAAACCAGAAATACAAACTGGTTAAATGACAGCATG  700

seq1  TTCAACACGCAGTCCTGGTAAAACTGGATGGTTACATATAGACAAATGCA  750
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCAACACGCAGTCCTGGT-AAACTGGATGGTTACATATAGACAAATGCA  749

seq1  AATAGATCCACATTCATCATCATGCACAAATCTCAACTTTGAATGCATCA  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AATAGATCCACATTCATCATCATGCACAAATCTC-ACTTTGAATGCATCA  798

seq1  AAGATATCAACATAAGGCAGGATACACTGAACCTTAGAGATGATAGTTGA  850
      |||||||| |||||||||||||||||||||  |||||||||||||| |||
seq2  AAGATATC-ACATAAGGCAGGATACACTGA--CTTAGAGATGATAG-TGA  844

seq1  GGATAGTCTCAAACTCAGCACAAAAAAAGGTTTTCTGAACAGAACACTGA  900
       ||||||||| |||||||||||||||   | |||||||||||||||||||
seq2  -GATAGTCTC-AACTCAGCACAAAAA---GGTTTCTGAACAGAACACTGA  889

seq1  TTGCATTGGCACTAAGATCAACAGTAAATAAATAGGAACTCATGAAACTG  950
      ||||||||||||| ||||| |||||||   |||||  |||||||||||||
seq2  TTGCATTGGCACT-AGATC-ACAGTAA--TAATAG--ACTCATGAAACTG  933

seq1  AAAAACTTCTGCAAGGCAAAGAACAACCATCATGCAGATAAAACAGCAGA  1000
       ||||||||||||  || |||||||| ||||||||  ||||  |    ||
seq2  -AAAACTTCTGCA--GC-AAGAACAA-CATCATGCGAATAACGC----GA  974

seq1  CAATAAAATGGAAAAAAAATTAACCACCTATACTTCTGACTGTGCAGC  1048
      ||||||| ||    ||||| ||||||||  ||  ||||||||||||||
seq2  CAATAAATTG----AAAAAATAACCACC-CTATCTCTGACTGTGCAGC  1017