BAC Information

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BAC

Clone NameB6Ng01-120O20
Chromosome1 (Build37)
Map Location 14,669,107 - 14,669,923
singlet/doubletsinglet
Overlap genenone
Upstream geneXkr9, LOC100039843, EG433273, LOC100039859, LOC100039869, Eya1, LOC665391
Downstream geneMsc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949, LOC100039959, Kcnb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O20.bB6Ng01-120O20.g
ACCDH924741DH924742
length1,227817
definitionDH924741|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O20, 5' end.DH924742|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttaaaaaaaaggaaatagtttaagggatggcaagattgctcag
tggatagatacactttccacacaatcctgataaacttagtttggtcccag
aacccatgtaaaggtagaaggagaaatctattccacagaattgtcctctg
ccccatctacacacattatgaacatatacacataaaagaacaataaaaag
cttggatataaatcgtatgcaataaatggaataaatttaaaagcaaaata
gcaaaatgataatttaatatatatagtcctccaagtataattctatattt
gatgtatatcttctactatttgttgcattcattgcaatgcatggtttatt
actgacctacattcaggtgtaggcttagattttacaaaacctactttaat
aagagatctcaaatgttaactgcctcttctagctcattttccaaaaggta
ggagagaaaagatggcaaataggatgggggaggggtatgagcctgtatgg
atgtagatctttggagctattctaatctccgtttgtcaagataccagcag
tccagttcaatagagtcaggataataaacatgaataagtagcagaggcat
gatccaacagaaactcctaggcctctcgccatcaacataaatcatcagga
atgaccaggattagctgggacactaggaaaagttctctgttctttctctc
tcaaggaattgacaatcagtgaaggtgcaagaccattgatgcattgcaag
gctacctatgcaaatgctgagtcactgtcctttgtgtcctatgtatatgt
tctaccaacatcacatatcctcccatagctaacaccagagataaccagat
ggctacagacgagggcaacagaaaccaaagctacttggcatcatcagaac
ccagttctcccaccacactctgggtactccaacaccagaaaatcagattc
tgatttaaatcacatctcatgatgatgatagaggacttcagaaggacata
aatagtctctcaaagaaattacgaacacagataaccagctacaagctctt
aaggaagaaacacaaaaatcttaaggatttaggaaaccaacaacaggcag
gattgattaaactttccggatataattggaaatggaacataaggacccct
caagggacacctggaaatgaaacttgtaaagaaccggagtcttgatgtcc
gagccttccgctacacgaaaacttcta
gaattcttatttgtcatgaaaggtagtgttttgtagtcttacctggagcc
ccgagtctctaatattgactaatttctctacgtatagaatttaaggtcct
gtaaacctggaactctgagccacctgctagtcgttaaaacaattacatgg
ttaagagctcacaaacaaagaattaatattggtcctgggttgggttacct
cccagtccatatgtaggaggatgaattatgtctttgtgccacttaggagc
gatggctctggaacacacagaaaaggagagtagaaggggagaattcttcc
tggctttttctgcctggacactgaattcccaaaaccggtcactgacaaca
agctccttctcttgtttgagtgacataatttactttaataatcctgtact
atgtgtttttccaattgtgaaaaaaagttaattttagttacttatctgac
agcggtttgcttcgggtcccactctcaccactaggcctgttcaggaaggg
tttaagactcacactcttttggagcggagtcttttttgttctgattgcat
cactgctctgcaggggatggtgttttacatgggcaaccagcagcgttgtc
tacttttctttcttggtagtcgtatgcatgatggtaccaagtattgtgag
ccacacttcagaagctgcaaggaattctggtcctgcctggtgattgtgtt
cctctcatgaatcactgtctctgctgggactagtgccacctggcaggcaa
taatagactttctacaggaatcctcaaactagtttgtgatactccaaaca
gtggggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_14669107_14669923
seq2: B6Ng01-120O20.g_68_884

seq1  GAATTCTTATTTGTCATGAAAGGTAGTGTTTTGTAGTCTTACCTGGAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTGTCATGAAAGGTAGTGTTTTGTAGTCTTACCTGGAGCC  50

seq1  CCGAGTCTCTAATATTGACTAATTTCTCTACGTATAGAATTTAAGGTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTCTCTAATATTGACTAATTTCTCTACGTATAGAATTTAAGGTCCT  100

seq1  GTAAACCTGGAACTCTGAGCCACCTGCTAGTCGTTAAAACAATTACATGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACCTGGAACTCTGAGCCACCTGCTAGTCGTTAAAACAATTACATGG  150

seq1  TTAAGAGCTCACAAACAAAGAATTAATATTGGTCCTGGGTTGGGTTACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGCTCACAAACAAAGAATTAATATTGGTCCTGGGTTGGGTTACCT  200

seq1  CCCAGTCCATATGTAGGAGGATGAATTATGTCTTTGTGCCACTTAGGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCCATATGTAGGAGGATGAATTATGTCTTTGTGCCACTTAGGAGC  250

seq1  GATGGCTCTGGAACACACAGAAAAGGAGAGTAGAAGGGGAGAATTCTTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCTGGAACACACAGAAAAGGAGAGTAGAAGGGGAGAATTCTTCC  300

seq1  TGGCTTTTTCTGCCTGGACACTGAATTCCCAAAACCGGTCACTGACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTTCTGCCTGGACACTGAATTCCCAAAACCGGTCACTGACAACA  350

seq1  AGCTCCTTCTCTTGTTTGAGTGACATAATTTACTTTAATAATCCTGTACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTCTCTTGTTTGAGTGACATAATTTACTTTAATAATCCTGTACT  400

seq1  ATGTGTTTTTCCAATTGTGAAAAAAAGTTAATTTTAGTTACTTATCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTTTTTCCAATTGTGAAAAAAAGTTAATTTTAGTTACTTATCTGAC  450

seq1  AGCGGTTTGCTTCGGGTCCCACTCTCACCACTAGGCCTGTTCAGGAAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGTTTGCTTCGGGTCCCACTCTCACCACTAGGCCTGTTCAGGAAGGG  500

seq1  TTTAAGACTCACACTCTTTTGGAGCGGAGTCTTTTTTGTTCTGATTGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACTCACACTCTTTTGGAGCGGAGTCTTTTTTGTTCTGATTGCAT  550

seq1  CACTGCTCTGCAGGGGATGGTGTTTTACATGGGCAACCAGCAGCGTTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCTCTGCAGGGGATGGTGTTTTACATGGGCAACCAGCAGCGTTGTC  600

seq1  TACTTTTCTTTCTTGGTAGTCGTATGCATGATGGTACCAAGTATTGTGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTTCTTTCTTGGTAGTCGTATGCATGATGGTACCAAGTATTGTGAG  650

seq1  CCACACTTCAGAAGCTGCAAGGAATTCTGGTCCTGCCTGGTGATTGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACTTCAGAAGCTGCAAGGAATTCTGGTCCTGCCTGGTGATTGTGTT  700

seq1  CCTCTCATGAATCACTGTCTCTGCTGGGACTAGTGCCACCTGGCAGGCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCATGAATCACTGTCTCTGCTGGGACTAGTGCCACCTGGCAGGCAA  750

seq1  TAATAGACTTTCTACAGGAATCCTCAAACTAGTTTGTGATACTCCAAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGACTTTCTACAGGAATCCTCAAACTAGTTTGTGATACTCCAAACA  800

seq1  GTGGGGGGGGGGGGGGG  817
      |||||||||||||||||
seq2  GTGGGGGGGGGGGGGGG  817