BAC Information

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BAC

Clone NameB6Ng01-121F24
Chromosome1 (Build37)
Map Location 103,237,982 - 103,239,045
singlet/doubletsinglet
Overlap genenone
Upstream geneC230078M14Rik, LOC100041909
Downstream geneLOC100040993, LOC383650
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121F24.bB6Ng01-121F24.g
ACCDH925075DH925076
length1,0521,192
definitionDH925075|Mus musculus domesticus DNA, BAC clone: B6Ng01-121F24, 5' end.DH925076|Mus musculus domesticus DNA, BAC clone: B6Ng01-121F24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcagtatataatcttctaaatatatttgtttctatttatggg
ttagtgtatatgaatgcacacaggtgttcaggaacccttggattctagac
ttacaggaaattgtcagaaaatttgacgtagttgtctgcaactgaattct
agttctcagaagaatatcataaactctactaaccctgaagccatctcttt
agcttcagatacataaatacatataaatatacatacatgaatattcaaat
ataaaaatatgttcatatacacaaatacatatattcactttcaagaatat
atattttgacataaacatacaatatttaaatacattcataatatggaaaa
aagaaaaagaatcactataatctaccaacactaacataggttctatagca
tactcaatctcctttactattttattatacatacatcattcattgacctt
gataacccctcttggcttaccgttatttctgtaatttgagaaatttttat
tctcaattcctgtatgagaatttctcattttctgtataaaaggcttatat
tataacacaatatagtagttttaattaccttttctgaatcaagattgctt
gactatgcttgttgagtccctaattccaaccagtaccaccctgggcaaat
ggtgacagttacaatttctgaggaatacagtctgtataaattatcttgtt
cacagtaataatcattattatgacaattatttacaagctacattcatata
aatggtttaataggtaaaggtcttgaaacaagtacgtttattggcttatc
tttttcaaaaccttcttttatacaggttattaaacacttcaatattcctc
agcatctattgaccaaaagtatgggagaaaaaaggactaagagacgaggg
cgatgtagatctgcttaaagtagttgcttggggcaattccaaattttttt
gtctgcagtccagtctctagcaaacactagaaaaaaccagagctactcca
tagctcaagagcagccacagcaccaccgagttcgttggtgtttttcctct
ct
gaattccacataaaaccagagacaatgaaacttatatagaagaaagtgga
gaaaagccttgaagatatgggcacaaggggaaaattcctgaatagaaaag
caatgggttgtgctgcacctgaggaataccgaatggcagagaagcacctg
aaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaac
actgagattccacttcactccagtcagaatggctaagataaaaaactcag
gtgacagcagatgcgggaaaggatgtggagaaaggggaacactcctccat
tgttggtgggattgcaagtttgtacaacgactctggaaatcactctggca
gatcctcagaaaattggacatagtgataccggaggatcccgcaatacctc
tcctgggcatatatccagaagatgtcccaactggtaagaagaacacatgt
tcaaatatgttcatagcagccttgtttataaaagccagaagctggaaaga
acccagatgctcctcaacagaggaatggatacagaaaatgtggtacattt
acacaatggagtattactcagctattaaaaaaatgaatttttgaaattcc
tacgcaaatggatggatctggagggtatcatcctgagtgaggtaacccaa
tcacaaaggaactcgcacaatatgtactcactgataagtggatattagcc
cagaaacttaggatacccaagatataagatacacttgccaaacgcatgaa
attcaaaaaaacaaagaccaaagtgtggacattttaccctttcttaaaat
gggaaacaaaacatcatggaagggagttacagagacaaaatttgaactgt
gagaaatgggtgggaccatctagtgattgctatatgcagggatcaatccc
ataatcagctttcaaatgctgacacaattgcttacactagctagattttg
ctgaaaggaccaggaatagcttctctctgtgaaactagctgggctagcaa
actcatactggatgattacagtcagctattggaatgggccatgcctcagt
ggggggagctaagaatatccagcagctaaggcactgcaaccttaagggaa
cacatattgactagcgataccgggattgttgctagttgcgtatgtcaaaa
agtgcttagctcggctatctcgtgtgaaagaagcgcgcatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103237982_103239045
seq2: B6Ng01-121F24.b_47_1098 (reverse)

seq1  AGAGAGAGAAATACACCAACGAACTTCTGTTGGTGCTGTGGCTGCTTCTT  50
      |||||| |||| |||||||||||||   | ||||||||||||||| ||||
seq2  AGAGAG-GAAAAACACCAACGAACT--CGGTGGTGCTGTGGCTGC-TCTT  46

seq1  GAGCTAATTGGTGTAGCCTCCTGGTTTTTTCTAGTGTTTGCTAGAGAACT  100
      ||||||  ||| |||||   |||||||||||||||||||||||||| |||
seq2  GAGCTA--TGGAGTAGC--TCTGGTTTTTTCTAGTGTTTGCTAGAG-ACT  91

seq1  GGACTGCAGACAAAAAAATTTGGAATTGCCCCCAAGCAACTACTTCTAAG  150
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  GGACTGCAGACAAAAAAATTTGGAATTG-CCCCAAGCAACTACTT-TAAG  139

seq1  CAGATCTACATCGCCCTTGTCCTCTTAGTCCTTTTTTCTCCCATACTTTT  200
      ||||||||||||||||| || |||||||||||||||||||||||||||||
seq2  CAGATCTACATCGCCCTCGT-CTCTTAGTCCTTTTTTCTCCCATACTTTT  188

seq1  GGTCAATAGATGCTGAGGAATATTGAAGTGTTTAATAACCTGTATAAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAATAGATGCTGAGGAATATTGAAGTGTTTAATAACCTGTATAAAAG  238

seq1  AAGGTTTTGAAAAAGATAAGCCAATAAACGTACTTGTTTCAAGACCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTTTGAAAAAGATAAGCCAATAAACGTACTTGTTTCAAGACCTTTA  288

seq1  CCTATTAAACCATTTATATGAATGTAGCTTGTAAATAATTGTCATAATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTAAACCATTTATATGAATGTAGCTTGTAAATAATTGTCATAATAA  338

seq1  TGATTATTACTGTGAACAAGATAATTTATACAGACTGTATTCCTCAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTACTGTGAACAAGATAATTTATACAGACTGTATTCCTCAGAAA  388

seq1  TTGTAACTGTCACCATTTGCCCAGGGTGGTACTGGTTGGAATTAGGGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAACTGTCACCATTTGCCCAGGGTGGTACTGGTTGGAATTAGGGACT  438

seq1  CAACAAGCATAGTCAAGCAATCTTGATTCAGAAAAGGTAATTAAAACTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGCATAGTCAAGCAATCTTGATTCAGAAAAGGTAATTAAAACTAC  488

seq1  TATATTGTGTTATAATATAAGCCTTTTATACAGAAAATGAGAAATTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTGTGTTATAATATAAGCCTTTTATACAGAAAATGAGAAATTCTCA  538

seq1  TACAGGAATTGAGAATAAAAATTTCTCAAATTACAGAAATAACGGTAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGGAATTGAGAATAAAAATTTCTCAAATTACAGAAATAACGGTAAGC  588

seq1  CAAGAGGGGTTATCAAGGTCAATGAATGATGTATGTATAATAAAATAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGGGGTTATCAAGGTCAATGAATGATGTATGTATAATAAAATAGTA  638

seq1  AAGGAGATTGAGTATGCTATAGAACCTATGTTAGTGTTGGTAGATTATAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGATTGAGTATGCTATAGAACCTATGTTAGTGTTGGTAGATTATAG  688

seq1  TGATTCTTTTTCTTTTTTCCATATTATGAATGTATTTAAATATTGTATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTTTTTCTTTTTTCCATATTATGAATGTATTTAAATATTGTATGT  738

seq1  TTATGTCAAAATATATATTCTTGAAAGTGAATATATGTATTTGTGTATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTCAAAATATATATTCTTGAAAGTGAATATATGTATTTGTGTATAT  788

seq1  GAACATATTTTTATATTTGAATATTCATGTATGTATATTTATATGTATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATTTTTATATTTGAATATTCATGTATGTATATTTATATGTATTT  838

seq1  ATGTATCTGAAGCTAAAGAGATGGCTTCAGGGTTAGTAGAGTTTATGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGAAGCTAAAGAGATGGCTTCAGGGTTAGTAGAGTTTATGATA  888

seq1  TTCTTCTGAGAACTAGAATTCAGTTGCAGACAACTACGTCAAATTTTCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTGAGAACTAGAATTCAGTTGCAGACAACTACGTCAAATTTTCTG  938

seq1  ACAATTTCCTGTAAGTCTAGAATCCAAGGGTTCCTGAACACCTGTGTGCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTCCTGTAAGTCTAGAATCCAAGGGTTCCTGAACACCTGTGTGCA  988

seq1  TTCATATACACTAACCCATAAATAGAAACAAATATATTTAGAAGATTATA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATACACTAACCCATAAATAGAAACAAATATATTTAGAAGATTATA  1038

seq1  TACTGAAAGAATTC  1064
      ||||||||||||||
seq2  TACTGAAAGAATTC  1052