BAC Information

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BAC

Clone NameB6Ng01-121P14
Chromosome1 (Build37)
Map Location 101,872,238 - 102,020,330
singlet/doubletdoublet
Overlap geneC230078M14Rik
Upstream geneLOC633295
Downstream geneEG666200
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121P14.bB6Ng01-121P14.g
ACCDH925521DH925522
length992904
definitionDH925521|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P14, 5' end.DH925522|Mus musculus domesticus DNA, BAC clone: B6Ng01-121P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(101,872,238 - 101,873,011)(102,019,811 - 102,020,330)
sequence
gaattcagtagaataaaagactttttgcttttgcatactatttgagactg
ggacatcattcttcagcaaatcatggacactaacaagggaacatcaggca
catagcctagatatcagagtccctaaatggggaaggagaactcaaggaat
taccagattctggaccagggagatactggctcaagaaagatctcgggatt
atgaagactggaaacaaatctcttcagacaggcagaaaaaaaaatctctt
acatgggtattgaaattaggcatctaataccgaatggcagagaagcacct
gaaaaaatgttcaacatccttaatcatcagggaaatgcaaatcaaaacaa
cactgagattccacttcactccagtcagaatggctaagatcaaaaactca
ggtgacagcagatgctggcgaggatgtggagaaaggggaacactcctcca
ttgttggtgggattgcaagcttgtacaaccactcttggaaatcagtctgg
cgtttcctcagaaaatttgacatagtactaccagaggatcccgcaatacc
tctcctgggcatatatccagaagatgtcccaaccagtaagaagaacacat
gctccactatgttcatagaagccttatttataatagccagaagctggaaa
gaacccagatgcccctcaacagaggaatggatacagaaaatgtggtacat
ttacacaatggaatactactcagctataaaaaaaatgaatttatgaaatt
cctaggcaaatggatggacctggagggcatcatcctgagtgaagtaacct
aatcacaaaggaactcgcacaatatgtactcactgataagtggatattag
cccagaaacttaggatacccaagatataagatacaagttgccaaacacat
gaaattcagaagaacgaagacaaagtgtggacactttaccctttcttaga
aatgggaacaaaacacccatagacgagttacagagacaaatt
gaattctgagagacatttgtaaagaatagaacagtacccatttggaacag
aatggattgaaaaagacacagaaaaaataagagttaacattttttgagtt
ccagaatgtaaggcgatcaaagctttgacaataacgtcttcctccctctg
cccagtcctctgtaactgcctatgctaaaggatagaaacgcccagtgata
cttcattctctcttggcctgtcatattgtttcacgtgcaacttaatagta
tattaataccttattttcatgatatagagaaatcaagctagaagtgagtt
gtaaacttcctccctgaagtttaactttcagagtctcagaagaagtcatg
tatacagttgggggagaaaagccatcagcagtcttacacagctgtgaacc
ctatgaaatatgcaaacaatcagccaggtaatatgttacagtgttaaccc
ctttatgactcgattgaaggaaaaatatattcctcgcactataaacctgg
tcagacaaccatagcctgggaatactgaatggaaaacataggccataggg
aaaactgaatgtttaactaaattgaaatatcatcaaactgtcttccaatt
tatatgcatttatatccacaaacaaatggtacttttaattgtgatcagag
aaacttctccttacattgaataatggtgaatgaagagacccaagagtgta
caagatcctgagaataaaaaagacatttatatataaatttatttttgtaa
gcctatttttaatcatggttcttaaattctttaaccttccttttagccca
ccacccatcagaggcagtggaaaagaaaggtcaggggagaagtgtatctg
tttagatgtttctttggagcaactccaactgtgttgtctggaaattggca
gttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_101872238_101873011
seq2: B6Ng01-121P14.b_47_820

seq1  GAATTCAGTAGAATAAAAGACTTTTTGCTTTTGCATACTATTTGAGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGAATAAAAGACTTTTTGCTTTTGCATACTATTTGAGACTG  50

seq1  GGACATCATTCTTCAGCAAATCATGGACACTAACAAGGGAACATCAGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATCATTCTTCAGCAAATCATGGACACTAACAAGGGAACATCAGGCA  100

seq1  CATAGCCTAGATATCAGAGTCCCTAAATGGGGAAGGAGAACTCAAGGAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCTAGATATCAGAGTCCCTAAATGGGGAAGGAGAACTCAAGGAAT  150

seq1  TACCAGATTCTGGACCAGGGAGATACTGGCTCAAGAAAGATCTCGGGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGATTCTGGACCAGGGAGATACTGGCTCAAGAAAGATCTCGGGATT  200

seq1  ATGAAGACTGGAAACAAATCTCTTCAGACAGGCAGAAAAAAAAATCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACTGGAAACAAATCTCTTCAGACAGGCAGAAAAAAAAATCTCTT  250

seq1  ACATGGGTATTGAAATTAGGCATCTAATACCGAATGGCAGAGAAGCACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGTATTGAAATTAGGCATCTAATACCGAATGGCAGAGAAGCACCT  300

seq1  GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAA  350

seq1  CACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGATCAAAAACTCA  400

seq1  GGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAACACTCCTCCA  450

seq1  TTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTTGGAAATCAGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTTGGAAATCAGTCTGG  500

seq1  CGTTTCCTCAGAAAATTTGACATAGTACTACCAGAGGATCCCGCAATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTCCTCAGAAAATTTGACATAGTACTACCAGAGGATCCCGCAATACC  550

seq1  TCTCCTGGGCATATATCCAGAAGATGTCCCAACCAGTAAGAAGAACACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTGGGCATATATCCAGAAGATGTCCCAACCAGTAAGAAGAACACAT  600

seq1  GCTCCACTATGTTCATAGAAGCCTTATTTATAATAGCCAGAAGCTGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACTATGTTCATAGAAGCCTTATTTATAATAGCCAGAAGCTGGAAA  650

seq1  GAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACAT  700

seq1  TTACACAATGGAATACTACTCAGCTATAAAAAAAATGAATTTATGAAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACAATGGAATACTACTCAGCTATAAAAAAAATGAATTTATGAAATT  750

seq1  CCTAGGCAAATGGATGGACCTGGA  774
      ||||||||||||||||||||||||
seq2  CCTAGGCAAATGGATGGACCTGGA  774

seq1: chr1_102019811_102020330
seq2: B6Ng01-121P14.g_69_588 (reverse)

seq1  CCCAGGCTATGGTTGTCTGACCAGGTTTATAGTGCGAGGAATATATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCTATGGTTGTCTGACCAGGTTTATAGTGCGAGGAATATATTTTT  50

seq1  CCTTCAATCGAGTCATAAAGGGGTTAACACTGTAACATATTACCTGGCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAATCGAGTCATAAAGGGGTTAACACTGTAACATATTACCTGGCTG  100

seq1  ATTGTTTGCATATTTCATAGGGTTCACAGCTGTGTAAGACTGCTGATGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTGCATATTTCATAGGGTTCACAGCTGTGTAAGACTGCTGATGGC  150

seq1  TTTTCTCCCCCAACTGTATACATGACTTCTTCTGAGACTCTGAAAGTTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCCCCAACTGTATACATGACTTCTTCTGAGACTCTGAAAGTTAA  200

seq1  ACTTCAGGGAGGAAGTTTACAACTCACTTCTAGCTTGATTTCTCTATATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGGAGGAAGTTTACAACTCACTTCTAGCTTGATTTCTCTATATC  250

seq1  ATGAAAATAAGGTATTAATATACTATTAAGTTGCACGTGAAACAATATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATAAGGTATTAATATACTATTAAGTTGCACGTGAAACAATATGA  300

seq1  CAGGCCAAGAGAGAATGAAGTATCACTGGGCGTTTCTATCCTTTAGCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCAAGAGAGAATGAAGTATCACTGGGCGTTTCTATCCTTTAGCATA  350

seq1  GGCAGTTACAGAGGACTGGGCAGAGGGAGGAAGACGTTATTGTCAAAGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTTACAGAGGACTGGGCAGAGGGAGGAAGACGTTATTGTCAAAGCT  400

seq1  TTGATCGCCTTACATTCTGGAACTCAAAAAATGTTAACTCTTATTTTTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCGCCTTACATTCTGGAACTCAAAAAATGTTAACTCTTATTTTTTC  450

seq1  TGTGTCTTTTTCAATCCATTCTGTTCCAAATGGGTACTGTTCTATTCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTTTTTCAATCCATTCTGTTCCAAATGGGTACTGTTCTATTCTTT  500

seq1  ACAAATGTCTCTCAGAATTC  520
      ||||||||||||||||||||
seq2  ACAAATGTCTCTCAGAATTC  520