BAC Information

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BAC

Clone NameB6Ng01-122L14
Chromosome1 (Build37)
Map Location 103,643,513 - 103,644,603
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041909, LOC100040993, LOC383650
Downstream geneLOC100041056
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122L14.bB6Ng01-122L14.g
ACCDH926076DH926077
length1,2521,079
definitionDH926076|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L14, 5' end.DH926077|Mus musculus domesticus DNA, BAC clone: B6Ng01-122L14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatcagatcttcaaagaagaagtaatactaatattcttcaacaa
aatagaaaaaaaaaaggaccatgactcaattcattctatgaagtcacagt
tacactgtgtattctccattagagatgaaagggtttctgtttaatcagga
acctgtcaagattttctttcatagaggacttcataagagactttttctat
ttctatcatgtttaatgttccaaatagatttttaaaacttgagtgtatat
tacttttagttacagaagacatcatgtatatttacgaggcatttaactat
tataaattattttgattacttaaaaacatcaatactgtaatgtatatttt
gaagtgaattttatgagtttataaaagaagaactaaaaaagaatgaatat
agaaaatatggctcactttcatgatgaaatactattcagccattaaaata
atcatgaattctttagacaaatgaatggatctcaaaaatatcatcctgag
tgaggtaaccaggacctaaaataacatgcatggtaactactcactggtaa
gtatgtataagcattttagtacaggatacccatgatgcccacatacccta
aaagttaaacaagaaggaagccactaaagtgtatgcttgaatctcactta
gaagtatgaatacaatagtattaggaggaacaggaagggaactgaatgaa
agagcagaggcagctgggaattgattgagctaaaagcaggtgtttgtagg
gacaggaaagagggccagagagccaggagaatgagtggaaacctgcagct
gctcttggtactgcaggaggcagttctcttgaaaaatcccagaaacctga
tatagggggaggcccacaagagtcaattcatgtgaccttaggcagaatag
acatgaaatctgaagaacgtgaactcttctgtagtaatgcaggcacttag
tggagggataaggacatcacccacctacacacttttgacccataattggc
ctttctaaagaaatgcagggcaagatagaatagtatctgaaaaatgggca
tgaataatacagctcaacttgagacccattattggggcagcacaatccct
gacatattaatgattctttggtatgcttacagaaagggagctagcaactg
tccctggagagcctcacggcgcgtaggaacgagtgcgataccaggcaatt
gcacgatggtgggaccttagaaggtgtggggatatattgagaggctcgac
tg
gaattcacttctcaggatctgcatctggaggcttatactgtgaagccttc
tctggtccctgtggacactatagtgacatttaccatctctctctctctct
ctctctctctctctcacacacacacacacaaagacataatttgaaataaa
atgaacctttacaaataattcttatgcaaaatttacaatagaaacaaaac
atgagtttatagactgagttaagtgatatggtaggactcaccctgaatgt
gagcaatatgccttgtgctggggtcctgtactgaaaaaaaaaaaaacaga
aaacaaacaaacaaacaaacaaaacatagcaaactgagcactgacatatg
tctctctgcatcctgattgcagatgcaatgtgacaagctgcttagaactt
ctcttaccatgacttccctgccttaaaagactataccttcacaatgagcc
aaaataagtttttactttctttgtcacatatgccaattatcatagtagtt
agaaaataagtaatatactcacatatgaatcctctgaagtgtgggtacag
aacagaagccatgatgcctataaagctctcttgacactgaagttccttcc
ttcctatagagcatctcctagtacaggatgttgcttttcttactgagttg
ccagaatgtggcatgtgaaatttactgatcatggcactgggcaaacaatc
caatgaaagcaataataaaaaaaaaatcgccttctcaataaataaggaaa
tagccaggcggtggtggcacatgcctttaatctcagcacttgggagacag
agacaggcagatttttgagttcgaggccagcctggtctacaaagtgagtt
ccaggaaagctatggttatacagagaaaacctgactcgaataaataaata
aataaataaataaataaataataaataaagaaatgttgtgtgtgtgcagg
aaatagtgtataacattgatgttgtatgccagattttacataggcagcag
aagctttgactgattctacccatggggagaatgtgctgtaacatttcagc
cacatggattgagggcctagcagtgggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_103643513_103644603
seq2: B6Ng01-122L14.g_70_1148

seq1  GAATTCACTTCTCAGGATCTGCATCTGGAGGCTTATACTGTGAAGCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTCTCAGGATCTGCATCTGGAGGCTTATACTGTGAAGCCTTC  50

seq1  TCTGGTCCCTGTGGACACTATAGTGACATTTACCATCTCTCTCTCTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTCCCTGTGGACACTATAGTGACATTTACCATCTCTCTCTCTCTCT  100

seq1  CTCTCTCTCTCTCTCACACACACACACACAAAGACATAATTTGAAATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCACACACACACACACAAAGACATAATTTGAAATAAA  150

seq1  ATGAACCTTTACAAATAATTCTTATGCAAAATTTACAATAGAAACAAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCTTTACAAATAATTCTTATGCAAAATTTACAATAGAAACAAAAC  200

seq1  ATGAGTTTATAGACTGAGTTAAGTGATATGGTAGGACTCACCCTGAATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTATAGACTGAGTTAAGTGATATGGTAGGACTCACCCTGAATGT  250

seq1  GAGCAATATGCCTTGTGCTGGGGTCCTGTACTGAAAAAAAAAAAAACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAATATGCCTTGTGCTGGGGTCCTGTACTGAAAAAAAAAAAAACAGA  300

seq1  AAACAAACAAACAAACAAACAAAACATAGCAAACTGAGCACTGACATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAAACAAACAAACAAAACATAGCAAACTGAGCACTGACATATG  350

seq1  TCTCTCTGCATCCTGATTGCAGATGCAATGTGACAAGCTGCTTAGAACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGCATCCTGATTGCAGATGCAATGTGACAAGCTGCTTAGAACTT  400

seq1  CTCTTACCATGACTTCCCTGCCTTAAAAGACTATACCTTCACAATGAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACCATGACTTCCCTGCCTTAAAAGACTATACCTTCACAATGAGCC  450

seq1  AAAATAAGTTTTTACTTTCTTTGTCACATATGCCAATTATCATAGTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGTTTTTACTTTCTTTGTCACATATGCCAATTATCATAGTAGTT  500

seq1  AGAAAATAAGTAATATACTCACATATGAATCCTCTGAAGTGTGGGTACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAAGTAATATACTCACATATGAATCCTCTGAAGTGTGGGTACAG  550

seq1  AACAGAAGCCATGATGCCTATAAAGCTCTCTTGACACTGAAGTTCCTTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGCCATGATGCCTATAAAGCTCTCTTGACACTGAAGTTCCTTCC  600

seq1  TTCCTATAGAGCATCTCCTAGTACAGGATGTTGCTTTTCTTACTGAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATAGAGCATCTCCTAGTACAGGATGTTGCTTTTCTTACTGAGTTG  650

seq1  CCAGAATGTGGCATGTGAAATTTACTGATCATGGCACTGGGCAAACAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAATGTGGCATGTGAAATTTACTGATCATGGCACTGGGCAAACAATC  700

seq1  CAATGAAAGCAATAATAAAAAAAAAATCGCCTTCTCAATAAATAAGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAAGCAATAATAAAAAAAAAATCGCCTTCTCAATAAATAAGGAAA  750

seq1  TAGCCAGGCGGTGGTGGCACATGCCTTTAATCTCAGCACTTGGGAGACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCAGGCGGTGGTGGCACATGCCTTTAATCTCAGCACTTGGGAGACAG  800

seq1  AGACAGGCAGATTTTTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGCAGATTTTTGAGTTCGAGGCCAGCCTGGTCTACAAAGTGAGTT  850

seq1  CCAGGACAGCTATGGTTATACAGAGAAAACCTGACTCGAATAAATAAATA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAAAGCTATGGTTATACAGAGAAAACCTGACTCGAATAAATAAATA  900

seq1  AATAAATAAATAAATAAATAAATAAATAAAGGAAATGTTGTGTGTTGTGC  950
      ||||||||||||||||||| |||||||||| ||||||||||||| |||| 
seq2  AATAAATAAATAAATAAAT-AATAAATAAA-GAAATGTTGTGTG-TGTG-  946

seq1  CAGGAAATAGTGTATAACAGTGAATGTTGTATGCCAGATTTTTACATAGG  1000
      ||||||||||||||||||| || ||||||||||||||| |||||||||||
seq2  CAGGAAATAGTGTATAACATTG-ATGTTGTATGCCAGA-TTTTACATAGG  994

seq1  CAGCAGAAGC-TTGACTGATTCTAACCCAT-GTGAGAATGTTGCTGTAAA  1048
      |||||||||| |||||||||||| |||||| | ||||||| |||||||| 
seq2  CAGCAGAAGCTTTGACTGATTCT-ACCCATGGGGAGAATG-TGCTGTAA-  1041

seq1  ACAATTTCAGCCACATGAGTTGAAGGGCCTAGGCAGGTGGGTA  1091
         ||||||||||||||  ||| |||||||| ||| |||||||
seq2  --CATTTCAGCCACATGGATTG-AGGGCCTA-GCA-GTGGGTA  1079