BAC Information

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BAC

Clone NameB6Ng01-123L22
Chromosome1 (Build37)
Map Location 132,198,442 - 132,199,626
singlet/doubletsinglet
Overlap genenone
Upstream geneThsd7b, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2, Dyrk3, Lgtn, Rassf5, Ikbke, Srgap2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123L22.bB6Ng01-123L22.g
ACCDH926830DH926831
length1,1651,226
definitionDH926830|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L22, 5' end.DH926831|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggttctaggaatcgctgccagactccaaggtatttgctgaca
tcgcgggtgttctctctttggcacgctgggcaatgtctcccccaatgtct
ccccgttaggctgtgggtgaggccgccctgctggaggtacatcaaggctt
atgcatatgggacagatgctccgtgcatctcattactccctaattgccac
ttgaatccaatgtcttcccgagagtggctctgctccactcaacagaactt
catgctagactttgcctctggaacccacaattagaattaaaaatttagtg
caaagccgtattaaagcaaggctgttcataaaggctcgcatccttcccac
ttagcacagcagctgtctatcccctgcagacatcagggtctgaggaagcg
catccattatttatttcatttttaaaagaatgtatgattttttcccctca
gaggatatattcaaaacttcaaactcagaagtgtataggatggggattga
gaaaagcacacacagaatcttcttgtcaacttctaggcttcacaggtatg
actttctagtatgtatgtatttacttaatttaaaaaaatagacacactaa
acaactctatttttcgaagtggctctgcgaaagagcggatgctttataac
actctaatcatactgctaagttggtgtaggtagatccaatcttagctgta
atgctttctgagaataaatgacttaagttatttaaaactcagcaaacgtc
tgtgtgtgctgctctctgccgggtgctacagatgcagaggccacactaag
tatgtccactgtctcagaagcacactgccaccaactatgacgatcttctt
aaggacaatgtggacagtgttagcaattgcttagttcttgcaacgcactt
ggtgctgtgctctgctattcatgcatccccccacatagaaagttctggtc
aataggatggtgaaggtaactatcatgtctttactctaccaagaaaatgt
attaaagtccagggagatgacataatacttcaagggtttaatgttttaac
acttcactctattggaccagacactaaggacttcatggacaaatgcttgt
tacatttctaaagggaataatgaaccaccaccagagtccatgactggtgt
tcagggctgacaaga
gaattccacacccctaagccccttaccccataaaaacccctagcttttga
gcctcgtggccgacatccgttatctcctgtgtgggatgcatgtcggtcca
gagctccgtcattaaacgtcctcatgtaattacattaggagatggtcctt
tgtgattttttgggtgcacgctgaatcgggaattgtgtgggggtttctcc
actaggtctaacagggacagattgagggacagagaagtcaagcattttgt
ttggaatttatggagacaaataggaggcaataaaataggctagaaaggca
cagacagtgagctagactcagaaacacacggtgctgctgagaaggaagta
tattaaggtgaaaagtaccagtgggatcctctctgctgctagacccaaga
aatgaggtcactcatgatgcaagcatcattaacagcctccatcagagcag
ctgtagtagacgatgggaccagacaggactaacttcaagatgtagaggga
agcagggcatggtgaaaattgtctgcaatctcagcactgtagtgtgtagt
ttctactaaccctgcttggagttccaggtggaccttgctaccagcttcca
ccctggttcccttggatccgtggacgaaagacacacacacacacacacac
acacacacacacacacacactaccttatttttaatatgctttttagctca
atgatgggggatcttctaagcctcccacggctaatgtgccctttaccttc
acacccagctcaacacctctaaatctaccctcaatttagtttcctgggtt
accttctccttgctcagcaccttaaatctgccctcagctttagttgcctt
tctaatcttcctgcctgctgccccaggcccagtcaggggaagcccaccaa
atggcactctacccaagatctcacatggctagtgttctcccctccttccc
atgcatggcgaatcctcttcctctcccgcgtctctaagcctgcccgaaag
aacctggaagccctgctctttccaccagccacttgctgctgagcatcttt
atggtatggaccaaacctggggaaagagcccttagaggttcacaacaaga
atttctattcgcagcatcgaaacacttctctacagaaactttggataagt
taagagcaagggaaatgagtcagttcaacttggatcctagagagccttct
tatttattagtcattgatatatagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132198442_132199626
seq2: B6Ng01-123L22.b_48_1212

seq1  GAATTCCAGGTTCTAGGAATCGCTGCCAGACTCCAAGGTATTTGCTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTTCTAGGAATCGCTGCCAGACTCCAAGGTATTTGCTGACA  50

seq1  TCGCGGGTGTTCTCTCTTTGGCACGCTGGGCAATGTCTCCCCCAATGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCGGGTGTTCTCTCTTTGGCACGCTGGGCAATGTCTCCCCCAATGTCT  100

seq1  CCCCGTTAGGCTGTGGGTGAGGCCGCCCTGCTGGAGGTACATCAAGGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGTTAGGCTGTGGGTGAGGCCGCCCTGCTGGAGGTACATCAAGGCTT  150

seq1  ATGCATATGGGACAGATGCTCCGTGCATCTCATTACTCCCTAATTGCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATGGGACAGATGCTCCGTGCATCTCATTACTCCCTAATTGCCAC  200

seq1  TTGAATCCAATGTCTTCCCGAGAGTGGCTCTGCTCCACTCAACAGAACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCCAATGTCTTCCCGAGAGTGGCTCTGCTCCACTCAACAGAACTT  250

seq1  CATGCTAGACTTTGCCTCTGGAACCCACAATTAGAATTAAAAATTTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAGACTTTGCCTCTGGAACCCACAATTAGAATTAAAAATTTAGTG  300

seq1  CAAAGCCGTATTAAAGCAAGGCTGTTCATAAAGGCTCGCATCCTTCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCGTATTAAAGCAAGGCTGTTCATAAAGGCTCGCATCCTTCCCAC  350

seq1  TTAGCACAGCAGCTGTCTATCCCCTGCAGACATCAGGGTCTGAGGAAGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCACAGCAGCTGTCTATCCCCTGCAGACATCAGGGTCTGAGGAAGCG  400

seq1  CATCCATTATTTATTTCATTTTTAAAAGAATGTATGATTTTTTCCCCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATTATTTATTTCATTTTTAAAAGAATGTATGATTTTTTCCCCTCA  450

seq1  GAGGATATATTCAAAACTTCAAACTCAGAAGTGTATAGGATGGGGATTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGATATATTCAAAACTTCAAACTCAGAAGTGTATAGGATGGGGATTGA  500

seq1  GAAAAGCACACACAGAATCTTCTTGTCAACTTCTAGGCTTCACAGGTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCACACACAGAATCTTCTTGTCAACTTCTAGGCTTCACAGGTATG  550

seq1  ACTTTCTAGTATGTATGTATTTACTTAATTTAAAAAAATAGACACACTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTAGTATGTATGTATTTACTTAATTTAAAAAAATAGACACACTAA  600

seq1  ACAACTCTATTTTTCGAAGTGGCTCTGCGAAAGAGCGGATGCTTTATAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTATTTTTCGAAGTGGCTCTGCGAAAGAGCGGATGCTTTATAAC  650

seq1  ACTCTAATCATACTGCTAAGTTGGTGTAGGTAGATCCAATCTTAGCTGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTAATCATACTGCTAAGTTGGTGTAGGTAGATCCAATCTTAGCTGTA  700

seq1  ATGCTTTCTGAGAATAAATGACTTAAGTTATTTAAAACTCAGCAAACGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTCTGAGAATAAATGACTTAAGTTATTTAAAACTCAGCAAACGTC  750

seq1  TGTGTGTGCTGCTCTCTGCCGGGTGCTACAGATGCAGAGGCCACACTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGCTGCTCTCTGCCGGGTGCTACAGATGCAGAGGCCACACTAAG  800

seq1  TATGTCCACTGTCTCAGAAGCACACTGCCACCAACTATGACGATCTTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCACTGTCTCAGAAGCACACTGCCACCAACTATGACGATCTTCTT  850

seq1  AAGGACAATGTGGACAGTGTTAGCAATTGCTTAGTTCTTGCAACGCACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAATGTGGACAGTGTTAGCAATTGCTTAGTTCTTGCAACGCACTT  900

seq1  GGTGCTGTGCTCTGCTATTCATGCAT-CCCCCACATAGAAAGTTCTGGTC  949
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGTGCTGTGCTCTGCTATTCATGCATCCCCCCACATAGAAAGTTCTGGTC  950

seq1  AATAGGATGGTGAAGGTAACTATCAATGTCTTTAACTCTACCAAAGAAAA  999
      |||||||||||||||||||||||| |||||||| ||||||||||   |||
seq2  AATAGGATGGTGAAGGTAACTATC-ATGTCTTT-ACTCTACCAA--GAAA  996

seq1  ATGTATTAAAGTCCAGGGAGATGACATAAATACTTCAAGGGTTTTAAATG  1049
      ||||||||||||||||||||||||||| ||||||||||||||||  ||||
seq2  ATGTATTAAAGTCCAGGGAGATGACAT-AATACTTCAAGGGTTT--AATG  1043

seq1  TTTTAACAACTTCAACTCTAATTGAACCAGACAACTAAAGGACTTCCATG  1099
      ||||||| ||||| ||||| |||| ||||||| ||| |||||||| ||||
seq2  TTTTAAC-ACTTC-ACTCT-ATTGGACCAGAC-ACT-AAGGACTT-CATG  1087

seq1  AACAAAATGCTTGTTACATTTCCTAAAAGGAGATTAATGACCAACCACAC  1149
       || ||||||||||||||||| |||||  | || |||||| | ||||| |
seq2  GAC-AAATGCTTGTTACATTT-CTAAA--GGGAATAATGAACCACCAC-C  1132

seq1  AGAAGCACATTGGACTGGGTGTCAGGGCTGACAAGA  1185
      || ||  |||  ||||||   |||||||||||||||
seq2  AG-AGTCCAT--GACTGGTGTTCAGGGCTGACAAGA  1165