BAC Information

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BAC

Clone NameB6Ng01-123L24
Chromosome1 (Build37)
Map Location 11,554,065 - 11,555,078
singlet/doubletsinglet
Overlap geneA830018L16Rik
Upstream geneCpa6, LOC433271, C030045D06Rik
Downstream geneLOC665262
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123L24.bB6Ng01-123L24.g
ACCDH926834DH926835
length1,014822
definitionDH926834|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L24, 5' end.DH926835|Mus musculus domesticus DNA, BAC clone: B6Ng01-123L24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctatccttgtcttcatttaatatactacaattttcacctatg
gatggaagaaatctggcattagaaatgtagttagaagtggatgacaggga
gagagccatcattgataaaaggctgcacagattgagacgatatacatcac
tacatgtaaaaatagcaaagaacagtacaaaagtacaaatggtattgttc
ataccaaatagtaatacaactttgatatttttaaaatgtatgtctgagtc
gcttaaaaaaaaaaagcccaaaagtctggatatactctttgacaaggttt
ctgtcagtaaccatcatggtgttttaaacctagttttaaacctagttgaa
tagctatgtatggagaacagcaagtggagggagagccagctgcactctcc
cacctttgtacatcatttctactctctctctctccctccttccctccctc
catctgtctgtcattctccctccctctctccctctcttcctctctccctc
tacccttccctccctctccccctctctccttccctctccctctcccagtc
cccctccccctttcccccctctccctctccttccccctccccttccttct
ctctctctccctccctctctcctccctcatttccttgctttcctaggtca
tgaaaaatgttcacaatttgcaaaaacttaaatactgtggcctgctcttg
cagatccctgccttttttcccctctaagctcccctatacaacctggacac
ctgacctgtaactaagaacttgtggagctttcactgactgtcccacctcc
ccttctcctgagtaacggggaaattgttgtacttattgatgagcttcaag
gacttcccctctctcttattaattctctttaaattaatttatcaatttac
tttcacatatcaatatcagcccctcctcccagtagccctcacacagctct
ccttcccttctctgagagagatagccttcccctctgatgtaacaaaactc
ccctccccaacccc

gaattcaggtgacagcagatgctggtgaggatgtggagaaagaggaacac
tcctccattgctggtgggattgcaagctggtgcaaccactctggaaatta
gtctggtggttccttagaaaattggacatagtactactggaagatccagt
aatacctctactgggcatatacccagaagatattctaactggtaataagg
acatatgttccactgtgttcatagcagccagaagctggaaagaacccaga
tgtccctctatagaggaatggatacagaaaatgtggtacatttacacaat
ggagtactactcagctattaaaatcaatgaatttatgaaattcttaggca
aatggatggatctggaggatatcatcctgagtgaggtatcccaatcacaa
aagaacacacatgatatgcattcactgataagtggatactaacccagaaa
tttacaataccggagatacaatttgcaaaacacatgaaactcaagaataa
ggaagaccaaagtgtggatacttcattcctttcttagaatagggaacgaa
atacccatgaatggaaactacagagacaaagttcagagcagagcctgaca
gaatgaccatccagagagtaccccactttggggatacagcccataaacaa
ccaccaaacccagacactaggcagatgccaacaagagcctgctgacagga
tcctgatattagcttgtctttctgtgaggcttttgtcagtgcctggcaaa
atacaaaaagtgggattgctcaacagtcattcctctggatggagcactag
gtccccatttaggagatggaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_11554065_11555078
seq2: B6Ng01-123L24.b_50_1063

seq1  GAATTCTCCTATCCTTGTCTTCATTTAATATACTACAATTTTCACCTATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTATCCTTGTCTTCATTTAATATACTACAATTTTCACCTATG  50

seq1  GATGGAAGAAATCTGGCATTAGAAATGTAGTTAGAAGTGGATGACAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGAAGAAATCTGGCATTAGAAATGTAGTTAGAAGTGGATGACAGGGA  100

seq1  GAGAGCCATCATTGATAAAAGGCTGCACAGATTGAGACGATATACATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCATCATTGATAAAAGGCTGCACAGATTGAGACGATATACATCAC  150

seq1  TACATGTAAAAATAGCAAAGAACAGTACAAAAGTACAAATGGTATTGTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTAAAAATAGCAAAGAACAGTACAAAAGTACAAATGGTATTGTTC  200

seq1  ATACCAAATAGTAATACAACTTTGATATTTTTAAAATGTATGTCTGAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCAAATAGTAATACAACTTTGATATTTTTAAAATGTATGTCTGAGTC  250

seq1  GCTTAAAAAAAAAAAGCCCAAAAGTCTGGATATACTCTTTGACAAGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAAAAAAAAAGCCCAAAAGTCTGGATATACTCTTTGACAAGGTTT  300

seq1  CTGTCAGTAACCATCATGGTGTTTTAAACCTAGTTTTAAACCTAGTTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGTAACCATCATGGTGTTTTAAACCTAGTTTTAAACCTAGTTGAA  350

seq1  TAGCTATGTATGGAGAACAGCAAGTGGAGGGAGAGCCAGCTGCACTCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATGTATGGAGAACAGCAAGTGGAGGGAGAGCCAGCTGCACTCTCC  400

seq1  CACCTTTGTACATCATTTCTACTCTCTCTCTCTCCCTCCTTCCCTCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTGTACATCATTTCTACTCTCTCTCTCTCCCTCCTTCCCTCCCTC  450

seq1  CATCTGTCTGTCATTCTCCCTCCCTCTCTCCCTCTCTTCCTCTCTCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGTCTGTCATTCTCCCTCCCTCTCTCCCTCTCTTCCTCTCTCCCTC  500

seq1  TCCCCTTCCCTCCCTCTCCCCCTCTCTCCTTCCCTCTCCCTCTCCCAGTC  550
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCTTCCCTCCCTCTCCCCCTCTCTCCTTCCCTCTCCCTCTCCCAGTC  550

seq1  CCCCTCCCCCTTTCCCCCCTCTCCCTCTCCTTCCCCCTCCCCTTCCTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCCCTTTCCCCCCTCTCCCTCTCCTTCCCCCTCCCCTTCCTTCT  600

seq1  CTCTCTCTCCCTCCCTCTCTCCTCCCTCA-TTCCTTGCTTTCCTAGGTCA  649
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CTCTCTCTCCCTCCCTCTCTCCTCCCTCATTTCCTTGCTTTCCTAGGTCA  650

seq1  TGAAAAATGTTCACAATTTGCAAAAACTTAAATACTGTGGCCTGCTCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAATGTTCACAATTTGCAAAAACTTAAATACTGTGGCCTGCTCTTG  700

seq1  CAGATCCCTGCCTTTTTTCCCCTCTAAGCTCCCCTATACAACCTGGACAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCCCTGCCTTTTTTCCCCTCTAAGCTCCCCTATACAACCTGGACAC  750

seq1  CTGACCTGTAACTAAGAACTTGTGGAGCTTTCACTGACTGTCCCACCTCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGTAACTAAGAACTTGTGGAGCTTTCACTGACTGTCCCACCTCC  800

seq1  CCTCCTCCTGAGTAACGGTGAAATTGTTGTACTTTATTGATGAGC-TCAA  848
      ||| |||||||||||||| ||||||||||||| |||||||||||| ||||
seq2  CCTTCTCCTGAGTAACGGGGAAATTGTTGTAC-TTATTGATGAGCTTCAA  849

seq1  GGAC-TCCCCTCTCTCTTATTAATCTCT-TTTAAATTAATTTATCAATTT  896
      |||| ||||||||||||||||||| ||| |||||||||||||||||||||
seq2  GGACTTCCCCTCTCTCTTATTAAT-TCTCTTTAAATTAATTTATCAATTT  898

seq1  AC-TTCACATATCAATATCAGCCCCCTCCTCCCAGTAGCCCTCACACAGC  945
      || |||||||||||||||||| ||||||||||||||||||||||||||||
seq2  ACTTTCACATATCAATATCAG-CCCCTCCTCCCAGTAGCCCTCACACAGC  947

seq1  TCCCCTTCCCTTCTCTGAGAAGAGATAGCCTTCCCCTCTGATGTAACAAA  995
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTCCTTCCCTTCTCTGAG-AGAGATAGCCTTCCCCTCTGATGTAACAAA  996

seq1  CACTCCCCTCCCCAACCCC  1014
       ||||||||||||||||||
seq2  -ACTCCCCTCCCCAACCCC  1014


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