BAC Information

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BAC

Clone NameB6Ng01-123N04
Chromosome1 (Build37)
Map Location 29,195,938 - 29,196,986
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665903, Gm597, LOC435614, EG623924
Downstream geneEG433283, LOC100040665, LOC665944
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123N04.bB6Ng01-123N04.g
ACCDH926886DH926887
length8061,045
definitionDH926886|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N04, 5' end.DH926887|Mus musculus domesticus DNA, BAC clone: B6Ng01-123N04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcataaaaatggctttctttctaggctgttatattgtatatgtgtg
agggtatggggtttgtcacagaagccttcaatgtccatctttctcaactg
tgagtatgaagtcatagatgccactgaaaaatagctcctttgccatttaa
aatcattgtgttcatggatcatggacttccacatgttttctatcaacatc
acagaccaaagacctacaaggtctctaacctcagaatgtgccatggacct
cagcatctggtggcagtaaatcccatagatatcaactttgtactctgttt
cagcatagatcttgtataccatctcagcccttggtggctacacaggccaa
agacatcagtttgggctatgaaaccctatatggtcccttgtggtagccta
gcccacagacattaacatgggtggcagaaaagcacagaccatgcacgtcc
acaaggtatttgggagtaacttggccaagggacattcaactgtcaaccat
tttacagtaacatggtcatggacatcaacaaaatgcgtggcttcatcaag
accacaggccccaacatggccctcattggaagcacggtccacagatatca
gcatccattgaattgatgacttctggcagtggtgctggttaagaaggagt
cagttttcacgtgactgactactgggagtttgaccttgctcctatgatta
taggcaacaaaatctgaatcaccttcttttccttgttctcctccttctcc
tctttctcgttctcctccttcatctcctcctcttcctccaccttcaccct
ccacca

gaattcaagaacacacatacacacacataaacacacaaagacatacacac
cacaaacacataagcaaatatatatgcacacagacatgcacacacacagc
catgaaaacacatatataacacaaacatacattaatacacaaacatacaa
taataaggaaatgtgaaaagcacatcaaaacagagaagatattacatatt
aggtgtaagactgaatctaatattaagtctaaattacactgattgagcca
tgcagtgctgtttgtactctactgattaatttttaagtaaaaactatact
gtgattcttgttcttgatatttttgttctttgggggtcaaggtttacttc
tttttaaaattatttatgtgactttttaacttttgctatataattaaatc
attattttcttcccctttatttctcctaaccctccctaaaaccccttgtt
gttttctttcaaattcatggccactttttaaattaattgttgttatttac
acgaatgtattaactaaacaaggaaaacaacaatagatatgctagcacag
cagtggaaaccaagtgatctcagtgtttcacaaagaactacagacaaaaa
aagaaatgctgagccctgcaaaaaacactcttcacttgaggaagagcaca
acaacttttttttgttcaggacaaatcggttaaccctaagaacataaata
catataaattctcattatgtaatagtctatggttgtcttgaaaccacact
gattttctggcattagcttccccagagttagcagcaactgtaagatctgt
catgcacgactaaacttaatatttaattaaaataagtggatgcagttcta
aaatgtagttgggcatatttttcagtgaatgatgcactgtgtgggacaca
tatctgtacccagtatgtatagagttggaggcaagacagtcaggagttta
gagtatgatcactctatcaactgaagccagcctaggttgcataagactct
gactcaaccattcgacaacatggtatactcctggtgatagctgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_29195938_29196986
seq2: B6Ng01-123N04.g_66_1110 (reverse)

seq1  TACAGCTATCA-CAAGAGTATACATAGTTTGTCGATTGGTTGAGTCAGAG  49
      ||||||||||| || ||||||||  |  ||||||| ||||||||||||||
seq2  TACAGCTATCACCAGGAGTATAC-CATGTTGTCGAATGGTTGAGTCAGAG  49

seq1  TCTTATGCAACCTAGGCTGGCTTCAGTTGATAGAGTTGATCATACTCTTA  99
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  TCTTATGCAACCTAGGCTGGCTTCAGTTGATAGAG-TGATCATACTC-TA  97

seq1  AACTCCTGACTGTCTTGCCTCCAACTCTTATACATACTGGGTACAGATAT  149
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AACTCCTGACTGTCTTGCCTCCAACTC-TATACATACTGGGTACAGATAT  146

seq1  GTGGTCCCACACAGTGCATCATTCACTGAAAAATATGCCCAACTACATTT  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GT-GTCCCACACAGTGCATCATTCACTGAAAAATATGCCCAACTACATTT  195

seq1  TAGAACTGCATCCACTTATTTTAATTAAATATTAAGTTTAGTCGTGCATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACTGCATCCACTTATTTTAATTAAATATTAAGTTTAGTCGTGCATG  245

seq1  ACAGATCTTACAGTTGCTGCTAACTCTGGGGAAGCTAATGCCAGAAAATC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATCTTACAGTTGCTGCTAACTCTGGGGAAGCTAATGCCAGAAAATC  295

seq1  AGTGTGGTTTCAAGACAACCATAGACTATTACATAATGAGAATTTATATG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGGTTTCAAGACAACCATAGACTATTACATAATGAGAATTTATATG  345

seq1  TATTTATGTTCTTAGGGTTAACCGATTTGTCCTGAACAAAAAAAAGTTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATGTTCTTAGGGTTAACCGATTTGTCCTGAACAAAAAAAAGTTGT  395

seq1  TGTGCTCTTCCTCAAGTGAAGAGTGTTTTTTGCAGGGCTCAGCATTTCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTCTTCCTCAAGTGAAGAGTGTTTTTTGCAGGGCTCAGCATTTCTT  445

seq1  TTTTTGTCTGTAGTTCTTTGTGAAACACTGAGATCACTTGGTTTCCACTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTCTGTAGTTCTTTGTGAAACACTGAGATCACTTGGTTTCCACTG  495

seq1  CTGTGCTAGCATATCTATTGTTGTTTTCCTTGTTTAGTTAATACATTCGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTAGCATATCTATTGTTGTTTTCCTTGTTTAGTTAATACATTCGT  545

seq1  GTAAATAACAACAATTAATTTAAAAAGTGGCCATGAATTTGAAAGAAAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAACAACAATTAATTTAAAAAGTGGCCATGAATTTGAAAGAAAAC  595

seq1  AACAAGGGGTTTTAGGGAGGGTTAGGAGAAATAAAGGGGAAGAAAATAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGGGGTTTTAGGGAGGGTTAGGAGAAATAAAGGGGAAGAAAATAAT  645

seq1  GATTTAATTATATAGCAAAAGTTAAAAAGTCACATAAATAATTTTAAAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAATTATATAGCAAAAGTTAAAAAGTCACATAAATAATTTTAAAAA  695

seq1  GAAGTAAACCTTGACCCCCAAAGAACAAAAATATCAAGAACAAGAATCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAAACCTTGACCCCCAAAGAACAAAAATATCAAGAACAAGAATCAC  745

seq1  AGTATAGTTTTTACTTAAAAATTAATCAGTAGAGTACAAACAGCACTGCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAGTTTTTACTTAAAAATTAATCAGTAGAGTACAAACAGCACTGCA  795

seq1  TGGCTCAATCAGTGTAATTTAGACTTAATATTAGATTCAGTCTTACACCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCAATCAGTGTAATTTAGACTTAATATTAGATTCAGTCTTACACCT  845

seq1  AATATGTAATATCTTCTCTGTTTTGATGTGCTTTTCACATTTCCTTATTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTAATATCTTCTCTGTTTTGATGTGCTTTTCACATTTCCTTATTA  895

seq1  TTGTATGTTTGTGTATTAATGTATGTTTGTGTTATATATGTGTTTTCATG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATGTTTGTGTATTAATGTATGTTTGTGTTATATATGTGTTTTCATG  945

seq1  GCTGTGTGTGTGCATGTCTGTGTGCATATATATTTGCTTATGTGTTTGTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGTGTGTGCATGTCTGTGTGCATATATATTTGCTTATGTGTTTGTG  995

seq1  GTGTGTATGTCTTTGTGTGTTTATGTGTGTGTATGTGTGTTCTTGAATTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTCTTTGTGTGTTTATGTGTGTGTATGTGTGTTCTTGAATTC  1045


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