BAC Information

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BAC

Clone NameB6Ng01-123P11
Chromosome1 (Build37)
Map Location 148,625,256 - 148,626,337
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123P11.bB6Ng01-123P11.g
ACCDH926996DH926997
length1,2491,074
definitionDH926996|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P11, 5' end.DH926997|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatgctgaatgtctgagaagcacaaaaagaaatg
tttaacatcctgagtcatcaaggaaatgtaaatcaaaacaaccttgagat
tccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacagt
gggtgctggataggatgtggagagtgaagaacccttctttgttgtgattg
caagctggtacaaccacttgagaaatcagtctagtggttgcttagaaaat
tgaacatagtactatctgaggacccagctataccactcctgggcatatac
ccaaaagatgctccaatatataacaaggacacatgctccataatgttcat
agcagacttatttataatagccagaagctgggaaaaaaaccagatgtcca
acagaagaatagatacagaaaatatggtacatttatacaatggagtacta
ctcagctattaaaaatgaattcatgaaattcttaggcaaatggatgtaac
tagaaaatatcatcctgagtgaggtaatccaacccaaaagaacaaaagaa
caagcattcactgataagtggataatagccccaaagcttagaatacctac
aatacaattcacagaccatatgaagctaaagaagaaggaaaaccaaagtg
tggatacttcagtcctttttagtagtgcaaacaaaatacccatggtagga
gatacagagacaaactgtggagcagagtctgaaggaaaggactcccagag
actgccccagatgtggaaccattctgtatacagttaccaaactcagagag
tattgtgaatatgaagaagtgcttgctgacaggattctgatatagctgtt
tcttgagaggctctcccagagcctgacaaacctagaggtagatgctaacc
attgaactgagcatggggtcctcaatggaggagttagcaaaggactgaag
gagttgaagaggtttgcacccccacagaagataactaaccacattttact
gtcagatggctgcttcagccctggctggacattgatgcaaaaatactcaa
taaaaaacttgttataaatctagcacaatcaaaacttcatcatattatca
ataaatgcttcctccagggaccagagtgtttccttaaggaattctcatgt
attccccattacaaagttgagaaatcagtgtgatctctatcatgatgcct
gaaggcttctgtcaacaaaatccaaggccttctctggtgattacaatcg
gaattcaggagcatctgaaattgtggcatgggagtgggggagacacagaa
atacaggatcttcattctaactccccagagctaccaaagactaaaccatc
aaccaaggagtacacatggagtgacccatggctccatctggttatgtagc
agaggatggccttgtggtacatcaatgggaggagaggttcttggccctgt
gaaggcttgatagccagtgatgggaaatgccaggctggggaagcaagagt
gcataggtggataagggaataccctcacagaaacagggtaagtcggtagg
ggatagggagttttgaaggggaaacctgtaaaggggataacacttaaaat
gtaaataaagaaaatatctaataaaaatatcatatatttttgtgagaatt
atttcagattgaaatttccttgtggtttcacatttcaatgttaggaacgt
gaattagaaattaaccttcctgtttttctccaatatttgagtgtttccta
aaccaaacctcgaacattaactaacaagcctattctgattattaagttat
tctggctttctcaaggcagtctcttcactgcttagaagctattgcaattt
atcttccattagtttccctcagccctctgttctataattctgtatattga
agtcacttctgtgctcttttggaacaggcaatggaacccagcttatcttg
tttacagtttttaacatacttgtgttatagaatttgtattttagagtctg
tatttcaaacaaactaatttattcctttctatatgacctttccgtccatt
actcaattcaagtgtctgctttatttcttataattttctttcttagagtt
tcctcatagataatccaattacaaataatgttacctctaagggagaagat
cttcaaggctgtgatgtttgagtaggtagccagaagaaattaaattcgag
taggtatctttttcctcataatgaatacttccagcttggttagcaaaata
tactagaaatcttgtacattttatttaacctgcgcaagtggtaagactaa
agccaggctatttaataaatcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148625256_148626337
seq2: B6Ng01-123P11.g_69_1142

seq1  GAATTCAGGAGCATCTGAAATTGTGGCATGGGAGTGGGGGAGACACAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGCATCTGAAATTGTGGCATGGGAGTGGGGGAGACACAGAA  50

seq1  ATACAGGATCTTCATTCTAACTCCCCAGAGCTACCAAAGACTAAACCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGATCTTCATTCTAACTCCCCAGAGCTACCAAAGACTAAACCATC  100

seq1  AACCAAGGAGTACACATGGAGTGACCCATGGCTCCATCTGGTTATGTAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGGAGTACACATGGAGTGACCCATGGCTCCATCTGGTTATGTAGC  150

seq1  AGAGGATGGCCTTGTGGTACATCAATGGGAGGAGAGGTTCTTGGCCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGATGGCCTTGTGGTACATCAATGGGAGGAGAGGTTCTTGGCCCTGT  200

seq1  GAAGGCTTGATAGCCAGTGATGGGAAATGCCAGGCTGGGGAAGCAAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCTTGATAGCCAGTGATGGGAAATGCCAGGCTGGGGAAGCAAGAGT  250

seq1  GCATAGGTGGATAAGGGAATACCCTCACAGAAACAGGGTAAGTCGGTAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGGTGGATAAGGGAATACCCTCACAGAAACAGGGTAAGTCGGTAGG  300

seq1  GGATAGGGAGTTTTGAAGGGGAAACCTGTAAAGGGGATAACACTTAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGGGAGTTTTGAAGGGGAAACCTGTAAAGGGGATAACACTTAAAAT  350

seq1  GTAAATAAAGAAAATATCTAATAAAAATATCATATATTTTTGTGAGAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATAAAGAAAATATCTAATAAAAATATCATATATTTTTGTGAGAATT  400

seq1  ATTTCAGATTGAAATTTCCTTGTGGTTTCACATTTCAATGTTAGGAACGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGATTGAAATTTCCTTGTGGTTTCACATTTCAATGTTAGGAACGT  450

seq1  GAATTAGAAATTAACCTTCCTGTTTTTCTCCAATATTTGAGTGTTTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGAAATTAACCTTCCTGTTTTTCTCCAATATTTGAGTGTTTCCTA  500

seq1  AACCAAACCTCGAACATTAACTAACAAGCCTATTCTGATTATTAAGTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAACCTCGAACATTAACTAACAAGCCTATTCTGATTATTAAGTTAT  550

seq1  TCTGGCTTTCTCAAGGCAGTCTCTTCACTGCTTAGAAGCTATTGCAA-TT  599
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TCTGGCTTTCTCAAGGCAGTCTCTTCACTGCTTAGAAGCTATTGCAATTT  600

seq1  ATCTTCCATTAGTTTCCCTCAGCCCTCTGTTCTATAATTCTGTATATTGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCATTAGTTTCCCTCAGCCCTCTGTTCTATAATTCTGTATATTGA  650

seq1  AGTCACTTCTGTGCTCTTTTGGAACAGGCAATGGAACCCAGCTTATCTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTTCTGTGCTCTTTTGGAACAGGCAATGGAACCCAGCTTATCTTG  700

seq1  TTTACAGTTTTTAACATACTTGTGTTATAGAATTTGTATTTTAGAGTCTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGTTTTTAACATACTTGTGTTATAGAATTTGTATTTTAGAGTCTG  750

seq1  TATTTCAAACAAACTAA-TTATTCCTTTCTATATGACCTTTCCGTCCATT  798
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TATTTCAAACAAACTAATTTATTCCTTTCTATATGACCTTTCCGTCCATT  800

seq1  ACTCAATTCAAGTGTCTGCTTTATTTC-TATAATTTTC-TTCTTAGAGTT  846
      ||||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  ACTCAATTCAAGTGTCTGCTTTATTTCTTATAATTTTCTTTCTTAGAGTT  850

seq1  TTCTCATAGATAATCCAATTACAAATAATGTTACCTCTAAGGGAGAAGAA  896
      | |||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCTCATAGATAATCCAATTACAAATAATGTTACCTCTAAGGGAGAAG-A  899

seq1  TCTTCAAAGGCTGTGATGTTTGAGTAAGGTTAGCCAG-AGAAAATAAAAT  945
      ||||| ||||||||||||||||||||  | ||||||| ||||| |||| |
seq2  TCTTC-AAGGCTGTGATGTTTGAGTA--GGTAGCCAGAAGAAATTAAATT  946

seq1  CTAGTAAGTTATCTTTTTTCTCAATATGAAATACATCCAGCATTTGTTTA  995
      | ||| || ||||||||| ||||  ||| ||||| ||||||  ||| |||
seq2  CGAGT-AGGTATCTTTTTCCTCATAATG-AATACTTCCAGC--TTGGTTA  992

seq1  GCAAAAATATACTTAGAAATCATGTACATTTTATTTTAGACCTGCGACAG  1045
      || ||||||||| |||||||| ||||||||||||||   |||||||  ||
seq2  GC-AAAATATAC-TAGAAATCTTGTACATTTTATTT--AACCTGCGCAAG  1038

seq1  TGGTAAGACTAAAG-CAGGTCATTTAAAATAAATCATA  1082
      |||||||||||||| ||||  ||||  |||||||||||
seq2  TGGTAAGACTAAAGCCAGGCTATTT--AATAAATCATA  1074