BAC Information

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BAC

Clone NameB6Ng01-123P24
Chromosome1 (Build37)
Map Location 102,143,434 - 102,266,702
singlet/doubletdoublet
Overlap geneC230078M14Rik
Upstream geneLOC633295, EG666200
Downstream geneLOC100041909
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123P24.bB6Ng01-123P24.g
ACCDH927019DH927020
length1,067328
definitionDH927019|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P24, 5' end.DH927020|Mus musculus domesticus DNA, BAC clone: B6Ng01-123P24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,143,434 - 102,144,495)(102,266,375 - 102,266,702)
sequence
gaattctctcctttcttaagagataatacagttgggctgggcaattatct
ggttatgggactaagcctcaggaagtcaggtgcttaaactatgctaagca
tataaagggtttattttattaatcattttatttgtttacatttcaaatag
ctcccttcccagttacccgtccacaaacccccatctcatccctcctctct
ctcctccccttgtcctctatgagggtgctcctccacctactcacccactc
ctgcctcactgctttagcatcccctatgctgtggcatcaagcctccacag
gaccaagggtctccagaattgttttttttttttttttttttttttagata
attctcctttctagaatgcctactccctcaagcagttcctgtgaggtacc
ctgaggtttttctgggtctgtgggaatatttgtgttctgaataagaaact
tgtcattttccttcttttccgcaattctttattggatgttgccagagcct
aagtgtgctctccctggtaaccaggctttcttcctctttctcagaagatc
ccctccacaccatgtagccacatgccacagtatgggtaacctccatgcct
gcttacctgaaacagaatgtcacttcccaccaccaccaccacctttatat
tttcaattctcttgtgagcagctactgataattttcagcttgctttcctt
agtggtttcctttttaactctaataaaatttacctcaaatgttccattga
gtccattcttaaattattctattatggaggacaaagaatcccaagaaggc
atctacactttcctggtatcatctgccgaccacaaagaaatttctctcaa
atgaccagtaatactacatgcatggctgttcattgatatgcttgtgtttg
caatcacatgtacatatggagacaaaggttgggttataatttacagtccc
tcttcaaatttattttgaggtagggactctccactgagcctgggaggtct
catttcagctgcattacaggcaaccactgaaccacacagctttgttatat
gggtccctagctataca
tgcatggaaggtaggaatgtggaggtaagcagcttcagtagaaaatgaga
cagcattccagaagtgtcctgtgaagcaaagagtctttgaacatgactgg
cttgttttcaatggggtatgttaaattagtaggctagtgggtgattttcc
agacagggagggcactgaacagaaaggggataagggaaaaggcagaagaa
aggttcacagaaatgggatggtggtgggggaatgtactcacggtcaccat
agcaacgcaaggggccaattctccaagctgcttctgagcttgatctgtgg
gtatcactgataattatctgagtttcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_102143434_102144495
seq2: B6Ng01-123P24.b_49_1115

seq1  GAATTCTCTCCTTTCTTAAGAGATAATACAGTTGGGCTGGGCAATTATCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTTTCTTAAGAGATAATACAGTTGGGCTGGGCAATTATCT  50

seq1  GGTTATGGGACTAAGCCTCAGGAAGTCAGGTGCTTAAACTATGCTAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGGGACTAAGCCTCAGGAAGTCAGGTGCTTAAACTATGCTAAGCA  100

seq1  TATAAAGGGTTTATTTTATTAATCATTTTATTTGTTTACATTTCAAATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGGTTTATTTTATTAATCATTTTATTTGTTTACATTTCAAATAG  150

seq1  CTCCCTTCCCAGTTACCCGTCCACAAACCCCCATCTCATCCCTCCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTTCCCAGTTACCCGTCCACAAACCCCCATCTCATCCCTCCTCTCT  200

seq1  CTCCTCCCCTTGTCCTCTATGAGGGTGCTCCTCCACCTACTCACCCACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCCCTTGTCCTCTATGAGGGTGCTCCTCCACCTACTCACCCACTC  250

seq1  CTGCCTCACTGCTTTAGCATCCCCTATGCTGTGGCATCAAGCCTCCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCACTGCTTTAGCATCCCCTATGCTGTGGCATCAAGCCTCCACAG  300

seq1  GACCAAGGGTCTCCAGAATTGTTTTTTTTTTTTTTTTTTTTTTTTAGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGGGTCTCCAGAATTGTTTTTTTTTTTTTTTTTTTTTTTTAGATA  350

seq1  ATTCTCCTTTCTAGAATGCCTACTCCCTCAAGCAGTTCCTGTGAGGTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTTTCTAGAATGCCTACTCCCTCAAGCAGTTCCTGTGAGGTACC  400

seq1  CTGAGGTTTTTCTGGGTCTGTGGGAATATTTGTGTTCTGAATAAGAAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTTTTCTGGGTCTGTGGGAATATTTGTGTTCTGAATAAGAAACT  450

seq1  TGTCATTTTCCTTCTTTTCCGCAATTCTTTATTGGATGTTGCCAGAGCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTTCCTTCTTTTCCGCAATTCTTTATTGGATGTTGCCAGAGCCT  500

seq1  AAGTGTGCTCTCCCTGGTAACCAGGCTTTCTTCCTCTTTCTCAGAAGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGCTCTCCCTGGTAACCAGGCTTTCTTCCTCTTTCTCAGAAGATC  550

seq1  CCCTCCACACCATGTAGCCACATGCCACAGTATGGGTAACCTCCATGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCACACCATGTAGCCACATGCCACAGTATGGGTAACCTCCATGCCT  600

seq1  GCTTACCTGAAACAGAATGTCACTTCCCACCACCACCACCACCTTTATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACCTGAAACAGAATGTCACTTCCCACCACCACCACCACCTTTATAT  650

seq1  TTTCAATTCTCTTGTGAGCAGCTACTGATAATTTTCAGCTTGCTTTCCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAATTCTCTTGTGAGCAGCTACTGATAATTTTCAGCTTGCTTTCCTT  700

seq1  AGTGGTTTCCTTTTTAACTCTAATAAAATTTACCTCAAATGTTCCATTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTTCCTTTTTAACTCTAATAAAATTTACCTCAAATGTTCCATTGA  750

seq1  GTCCATTCTTAAATTATTCTATTATGGA-GACAAAGAATCCCAAGAAGGC  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GTCCATTCTTAAATTATTCTATTATGGAGGACAAAGAATCCCAAGAAGGC  800

seq1  ATCTACACTTTCCTGGTATCATCTGCCGACCACAAAGAAATTTCTCTCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACACTTTCCTGGTATCATCTGCCGACCACAAAGAAATTTCTCTCAA  850

seq1  ATGACCAGTAATACTACATGCATGCCTGTTCATTGATATGCTTGTGTTTG  899
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGACCAGTAATACTACATGCATGGCTGTTCATTGATATGCTTGTGTTTG  900

seq1  CAATCACATGTACATATGGAGACAAAAGTT-GGATATAATTTACAGTCAC  948
      |||||||||||||||||||||||||| ||| || |||||||||||||| |
seq2  CAATCACATGTACATATGGAGACAAAGGTTGGGTTATAATTTACAGTCCC  950

seq1  TC-TCAAATTTATTTTGAGGTAGGGACTCT-CACTGAGCCT-GGAGGTCT  995
      || ||||||||||||||||||||||||||| |||||||||| ||||||||
seq2  TCTTCAAATTTATTTTGAGGTAGGGACTCTCCACTGAGCCTGGGAGGTCT  1000

seq1  CCATTCAGCTGGCATTACAGGCACACACTGGAACAACACAGCTTTG-TAT  1044
      |  ||||||| ||||||||||||  |||| |||| ||||||||||| |||
seq2  CATTTCAGCT-GCATTACAGGCAACCACT-GAACCACACAGCTTTGTTAT  1048

seq1  ATGGGT-CCTAGCAATACA  1062
      |||||| |||||| |||||
seq2  ATGGGTCCCTAGCTATACA  1067

seq1: chr1_102266375_102266702
seq2: B6Ng01-123P24.g_74_401 (reverse)

seq1  CTGTAACTCAGATAATTATCAGTGATACCAACAGATCAAACTCAGAAGCA  50
      ||| ||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  CTGAAACTCAGATAATTATCAGTGATACCCACAGATCAAGCTCAGAAGCA  50

seq1  GCTTGGAGAATTGGCCCCTTGCGTTGCTATGGTGACCGTGAGTACATTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGAGAATTGGCCCCTTGCGTTGCTATGGTGACCGTGAGTACATTCC  100

seq1  CCCACCACCATCCCATTTCTGTGAACCTTTCTTCTGCCTTTTCCCTTATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCACCATCCCATTTCTGTGAACCTTTCTTCTGCCTTTTCCCTTATC  150

seq1  CCCTTTCTGTTCAGTGCCCTCCCTGTCTGGAAAATCACCCACTAGCCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTGTTCAGTGCCCTCCCTGTCTGGAAAATCACCCACTAGCCTAC  200

seq1  TAATTTAACATACCCCATTGAAAACAAGCCAGTCATGTTCAAAGACTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTAACATACCCCATTGAAAACAAGCCAGTCATGTTCAAAGACTCTT  250

seq1  TGCTTCACAGGACACTTCTGGAATGCTGTCTCATTTTCTACTGAAGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCACAGGACACTTCTGGAATGCTGTCTCATTTTCTACTGAAGCTGC  300

seq1  TTACCTCCACATTCCTACCTTCCATGCA  328
      ||||||||||||||||||||||||||||
seq2  TTACCTCCACATTCCTACCTTCCATGCA  328