BAC Information

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BAC

Clone NameB6Ng01-124B13
Chromosome1 (Build37)
Map Location 150,764,543 - 150,898,135
singlet/doubletdoublet
Overlap geneLOC100042792, LOC435647
Upstream genenone
Downstream geneLOC100042813, Pla2g4a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124B13.bB6Ng01-124B13.g
ACCDH927091DH927092
length1,135556
definitionDH927091|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B13, 5' end.DH927092|Mus musculus domesticus DNA, BAC clone: B6Ng01-124B13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(150,764,543 - 150,765,679)(150,897,557 - 150,898,135)
sequence
gaattcttaggttgtaacaggaacttgaaatgcatctctttaaattgaca
gtcagaaattcttgggtaaataaatcactggtctctggtagcaagatatt
tacaaaccaaagtgctttatgtggaaaaaaaatgtcaggcaaagagtctg
aagtaggtacatgtagtttctctaggtcatatgcaataacatatcctatt
aattatcttcactattcctcttgcctcagaataaaagctatgtaaaatga
ggagtttatgcactttattgcttaatagtgtgacagcgagaagtatgtat
tttggaattaaagatcaataaatatttgctaaatttgaccttaccttttt
cctagctatattctccacttattttatctatatagttatcattgcaagaa
acaaatgaacccataagtttatcatcatatgctaccagtgcattttttgt
ttaaaagtcaacgactttacataaacatcagagaaatgagcaaaggagaa
tagatgaaaaatattggctcctgtcttgccagatagatttagcagtcctg
tggtctccaatagcagcaacttttgccttatatcactggaccatagagac
tggaacaaaggcaaagaacatagtatgtccaagaaaaataatgaaaagat
gataaacaatgataaatatttctcagtctatgtctatttagataaagtga
acatctacttaaaactagtttagaagggagaccctcaaagattagtacca
cctgaagagatccagaacaaatgttgtattaaatcacaatttcagagttc
atagttctccctcagcctctctgacacaccacatacatctgtaaacatgt
gcatgtgaagatctgaggattacctcaagtgtcttcttattccactttta
ttgtttacctactgtgcatgcaaagtgacaggctgtgtgtttctaaagat
tatccttatagaaacactgaaatgccaagtactcatacatatgtccaact
tttccgtatacatgcttgcatacttgcatgctaaacttttaacccattgc
tatttccccatcccaatccaatgtgaaatattccaacgtagggaagatga
tactatccggtctataccaaacacccacaacacac
tctgttatactctgtataccattttttaactgggttatttgatttttgga
gtctaacttcttgatgatttcgtgtatttcggacattgtccctctattag
atttatgattagcctagaatttctaatctctaaggtgccatttagtccta
ttgatagtgtcctgtgtcttgtacaatcttttcagtttcatgaggtccca
gttgtcaactgttatccttagagcctgagtcattgatgttctattcatga
aattttctagtgtcttccacaaggacaatgtgttagtaatgtgtatatat
atatatatatatatatatatatatatatatatatatatacacacatatat
atatatatatatacacacacacatacatatatagatatttaagtacactc
gaacacatatgccgtgtatgtattgggtttatatatttttaattttttac
agatataattataaagtaattatatttctcctttgcttaccttttttttc
tctccatgtttgtccatgacctaaacttcaaactgatatcctcttgtgta
tgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_150764543_150765679
seq2: B6Ng01-124B13.b_44_1178

seq1  GAATTCTTAGGTTGTAACAGGAACTTGAAATGCATCTCTTTAAATTGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAGGTTGTAACAGGAACTTGAAATGCATCTCTTTAAATTGACA  50

seq1  GTCAGAAATTCTTGGGTAAATAAATCACTGGTCTCTGGTAGCAAGATATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAAATTCTTGGGTAAATAAATCACTGGTCTCTGGTAGCAAGATATT  100

seq1  TACAAACCAAAGTGCTTTATGTGGAAAAAAAATGTCAGGCAAAGAGTCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACCAAAGTGCTTTATGTGGAAAAAAAATGTCAGGCAAAGAGTCTG  150

seq1  AAGTAGGTACATGTAGTTTCTCTAGGTCATATGCAATAACATATCCTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGGTACATGTAGTTTCTCTAGGTCATATGCAATAACATATCCTATT  200

seq1  AATTATCTTCACTATTCCTCTTGCCTCAGAATAAAAGCTATGTAAAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTTCACTATTCCTCTTGCCTCAGAATAAAAGCTATGTAAAATGA  250

seq1  GGAGTTTATGCACTTTATTGCTTAATAGTGTGACAGCGAGAAGTATGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTATGCACTTTATTGCTTAATAGTGTGACAGCGAGAAGTATGTAT  300

seq1  TTTGGAATTAAAGATCAATAAATATTTGCTAAATTTGACCTTACCTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAATTAAAGATCAATAAATATTTGCTAAATTTGACCTTACCTTTTT  350

seq1  CCTAGCTATATTCTCCACTTATTTTATCTATATAGTTATCATTGCAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCTATATTCTCCACTTATTTTATCTATATAGTTATCATTGCAAGAA  400

seq1  ACAAATGAACCCATAAGTTTATCATCATATGCTACCAGTGCATTTTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGAACCCATAAGTTTATCATCATATGCTACCAGTGCATTTTTTGT  450

seq1  TTAAAAGTCAACGACTTTACATAAACATCAGAGAAATGAGCAAAGGAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGTCAACGACTTTACATAAACATCAGAGAAATGAGCAAAGGAGAA  500

seq1  TAGATGAAAAATATTGGCTCCTGTCTTGCCAGATAGATTTAGCAGTCCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGAAAAATATTGGCTCCTGTCTTGCCAGATAGATTTAGCAGTCCTG  550

seq1  TGGTCTCCAATAGCAGCAACTTTTGCCTTATATCACTGGACCATAGAGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCCAATAGCAGCAACTTTTGCCTTATATCACTGGACCATAGAGAC  600

seq1  TGGAACAAAGGCAAAGAACATAGTATGTCCAAGAAAAATAATGAAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACAAAGGCAAAGAACATAGTATGTCCAAGAAAAATAATGAAAAGAT  650

seq1  GATAAACAATGATAAATATTTCTCAGTCTATGTCTATTTAGATAAAGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAATGATAAATATTTCTCAGTCTATGTCTATTTAGATAAAGTGA  700

seq1  ACATCTACTTAAAACTAGTTTAGAAGGGAGACCCTCAAAGATTAGTACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTACTTAAAACTAGTTTAGAAGGGAGACCCTCAAAGATTAGTACCA  750

seq1  CCTGAAGAGATCCAGAACAAATGTTGTATTAAATCACAATTTCAGAGTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGAGATCCAGAACAAATGTTGTATTAAATCACAATTTCAGAGTTC  800

seq1  ATAGTTCTCCCTCAGCCTCTCTGACACACCACATACATCTGTAAACATGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTCTCCCTCAGCCTCTCTGACACACCACATACATCTGTAAACATGT  850

seq1  GCATGTGAAGATCTGAGGATTACCTCAAGTGTCTTCTTATTCCACTTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGAAGATCTGAGGATTACCTCAAGTGTCTTCTTATTCCACTTTTA  900

seq1  TTGTTTACCTACTGTGCATGCAAAAGTGACAGGCTGTGTGTTTCTAAAGA  950
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGTTTACCTACTGTGCATGC-AAAGTGACAGGCTGTGTGTTTCTAAAGA  949

seq1  TTATCCTTATAGAAACACTGAAATGCCAAGTACTCATAACATATGTCCAA  1000
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTATCCTTATAGAAACACTGAAATGCCAAGTACTCAT-ACATATGTCCAA  998

seq1  CTTTTCCGTATACATGCTTGCATACTTGCATTGCTAAACTTTTAACCCAT  1050
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CTTTTCCGTATACATGCTTGCATACTTGCA-TGCTAAACTTTTAACCCAT  1047

seq1  TGCTTTATTTCCCCATCCCCATTCCAATGTGAAATTATATCAAACAGTAG  1100
      |||  ||||||||||| |||| |||||||||||| ||| || ||| ||||
seq2  TGC--TATTTCCCCAT-CCCAATCCAATGTGAAA-TAT-TCCAAC-GTAG  1091

seq1  GAAAGATGATACTCATCCCAGTCTATA---------CACAACACAC  1137
      | ||||||||||| || || |||||||         ||||||||||
seq2  GGAAGATGATACT-AT-CCGGTCTATACCAAACACCCACAACACAC  1135

seq1: chr1_150897557_150898135
seq2: B6Ng01-124B13.g_83_630 (reverse)

seq1  CACACATACACGTACACGTACACGTACACATACACATATACATAAGAGGA  50
                                      |||| ||||| |||||||
seq2  --------------------------------CACACATACACAAGAGGA  18

seq1  TATCAGTTTGAAGTTTAGGTCATGGACAAACCTGGAGAG-AAAAAAAGGT  99
      ||||||||||||||||||||||||||||||| ||||||| ||||||||||
seq2  TATCAGTTTGAAGTTTAGGTCATGGACAAACATGGAGAGAAAAAAAAGGT  68

seq1  AAGCAAAGGAGAAATATAATTACTTTATAATTATAACTGTAAAAAATTAA  149
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAGCAAAGGAGAAATATAATTACTTTATAATTATATCTGTAAAAAATTAA  118

seq1  AAATAAATAAACACAATTTATAAATGGCATAAGTGTTCAAAGGTACTAAA  199
      ||||| |||||| ||||  ||| | |||||| |||||| |  ||||| ||
seq2  AAATATATAAACCCAATACATACACGGCATATGTGTTCGAGTGTACTTAA  168

seq1  ATAGCTAAGTGTGTCTGTGTGTGTGTATATATATATATATGTGTGTGTGT  249
      ||| |||  | ||| ||||||||||||||||||||||||| | |||||||
seq2  ATATCTATATATGTATGTGTGTGTGTATATATATATATATATATGTGTGT  218

seq1  GTATATATATATATATATATATATATATATATATATATATATATACACAT  299
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATACACAT  268

seq1  TACTAACACATTGTCCTTGTGGAAGACACTAGAAAATTTCATGAATAGAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACACATTGTCCTTGTGGAAGACACTAGAAAATTTCATGAATAGAA  318

seq1  CATCAATGACTCAGGCTCTAAGGATAACAGTTGACAACTGGGACCTCATG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAATGACTCAGGCTCTAAGGATAACAGTTGACAACTGGGACCTCATG  368

seq1  AAACTGAAAAGATTGTACAAGACACAGGACACTATCAATAGGACTAAATG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAAAGATTGTACAAGACACAGGACACTATCAATAGGACTAAATG  418

seq1  GCACCTTAGAGATTAGAAATTCTAGGCTAATCATAAATCTAATAGAGGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCTTAGAGATTAGAAATTCTAGGCTAATCATAAATCTAATAGAGGGA  468

seq1  CAATGTCCGAAATACACGAAATCATCAAGAAGTTAGACTCCAAAAATCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCCGAAATACACGAAATCATCAAGAAGTTAGACTCCAAAAATCAA  518

seq1  ATAACCCAGTTAAAAAATGGTATACAGAGT  579
      ||||||||||||||||||||||||||||||
seq2  ATAACCCAGTTAAAAAATGGTATACAGAGT  548