BAC Information

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BAC

Clone NameB6Ng01-124E02
Chromosome1 (Build37)
Map Location 116,111,865 - 116,113,005
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124E02.bB6Ng01-124E02.g
ACCDH927208DH927209
length9211,135
definitionDH927208|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E02, 5' end.DH927209|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatatatatcccatcttttaatagggttatttggttttctgg
agtccaatttgttgattcctttatatatattggatattatcaccctatca
gatttaggattggtaaagatcttttcccaaactgttggttgtgttttgtc
ttatacacagtgtcctttgccttacagaagctttgttgcaattttatgat
gttccatttgtcgattcttgatcttacagcacaaaaattgctgttctctt
caggaattttcccactttgcccatatattcaaggctcttccccactttct
cctctataagtttaagtgtgtctggttttatgtgaagttccttgatccac
ttagaatttagctttgtacaaggagataaaaatggatgaatttgcattct
tatacatgctagcccccatttgagccaacaccatttgttgaaaatgctgt
attttttccactggatggtttaaactcccttgtcaaagatcaagtgacca
taggtgtgtgagttcatttctgggtcttcaattctattccattgatctac
ctgtctgtccctgtaccagtaccatgcagtttttatcacaatggttctgt
agtacaggtaaaggtcagggatgggcattccaccagagggtttttttttt
tttaatagtaataatagtttttgttatcctaggtttttttgttattccag
atgaatttgcaaattatccttccaaactctttgtaagaatttgagttgaa
attatgatggggattacattgaatccgtagattgctttcagcaaaatagt
catttttactatattaatcctgccaattcatggagcatggaagatctttc
catcttggtgagatcttctttatatttctttcttcagagatatgaagtct
taatcatgcagatttattcac

gaattcactcctagtcactcccattctcggggtgtaatagtggggtgatg
ggcaagcaacgaatcgggagctgtcacgccatatcaggtgctgaaacgtc
acgctgcgggttataaaagcagcgccattttcccggtttgggatcttcct
gagaagcaagcaataaagcttttgccgcggaagattctggtttgttgcgt
ctttcttgccggtcgagcgggacgcaatacaagggatgtgggtgtgatgg
cacacatatccttttactagaatatgtctaatggttggaaagaaagatat
gttggtaaaatgcttgctgcacaacatgaggacctgactttgaccctgca
gaacacatattagctaacatacagtgagacactgggaggtggagagcact
ataattcaggacaccatgtctcaatacatgcatgcatacatacatacata
catacatacatacatacatacataaggtgaacaaccactggtgaagctaa
cctctgtcttccatatgcatgcatacacatgtatgcccatacacataaac
acacatgtcataaaatcttatctattatcatggaacagacttattttttg
cttgttcagtttttgtacaactttctgatcaaacattttcatttttgagt
aatcaaattgaggaactttacatttttgttaggatacattcatttttagt
catttccagacccataaaaagctatatgctcattccctaagtcattttga
cctatcaatctttctgatagatggggctaggtgctactcaggctatgctc
acctttcagggagcccctttctctcctcggttgctctaaaagtaatggaa
gaggtaacctttaattggcacttggtaattttctgatgctcaccttttta
tgctatgaatgggacattccagtctgatacaatggacacataaactaaaa
gctgagtcttttgcctctgtgaattggaagaagccttatatagtacattc
ataggcgtccagtagcttatactgcggtaaacctcctctcttactttcac
cctccgaaggaggacaactgctgaactcagtaactcaaccctttcacatt
ccctcaaaactttctttctgtacttagtattccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_116111865_116113005
seq2: B6Ng01-124E02.g_68_1202

seq1  GAATTCACTCCTAGTCACTCCCATTCTCGGGGTGTAATAGTGGGGTGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCCTAGTCACTCCCATTCTCGGGGTGTAATAGTGGGGTGATG  50

seq1  GGCAAGCAACGAATCGGGAGCTGTCACGCCATATCAGGTGCTGAAACGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGCAACGAATCGGGAGCTGTCACGCCATATCAGGTGCTGAAACGTC  100

seq1  ACGCTGCGGGTTATAAAAGCAGCGCCATTTTCCCGGTTTGGGATCTTCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTGCGGGTTATAAAAGCAGCGCCATTTTCCCGGTTTGGGATCTTCCT  150

seq1  GAGAAGCAAGCAATAAAGCTTTTGCCGCGGAAGATTCTGGTTTGTTGCGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGCAAGCAATAAAGCTTTTGCCGCGGAAGATTCTGGTTTGTTGCGT  200

seq1  CTTTCTTGCCGGTCGAGCGGGACGCAATACAAGGGATGTGGGTGTGATGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGCCGGTCGAGCGGGACGCAATACAAGGGATGTGGGTGTGATGG  250

seq1  CACACATATCCTTTTACTAGAATATGTCTAATGGTTGGAAAGAAAGATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATCCTTTTACTAGAATATGTCTAATGGTTGGAAAGAAAGATAT  300

seq1  GTTGGTAAAATGCTTGCTGCACAACATGAGGACCTGACTTTGACCCTGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTAAAATGCTTGCTGCACAACATGAGGACCTGACTTTGACCCTGCA  350

seq1  GAACACATATTAGCTAACATACAGTGAGACACTGGGAGGTGGAGAGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACATATTAGCTAACATACAGTGAGACACTGGGAGGTGGAGAGCACT  400

seq1  ATAATTCAGGACACCATGTCTCAATACATGCATGCATACATACATACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTCAGGACACCATGTCTCAATACATGCATGCATACATACATACATA  450

seq1  CATACATACATACATACATACATAAGGTGAACAACCACTGGTGAAGCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACATACATACATACATAAGGTGAACAACCACTGGTGAAGCTAA  500

seq1  CCTCTGTCTTCCATATGCATGCATACACATGTATGCCCATACACATAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTCTTCCATATGCATGCATACACATGTATGCCCATACACATAAAC  550

seq1  ACACATGTCATAAAATCTTATCTATTATCATGGAACAGACTTA-TTATTG  599
      ||||||||||||||||||||||||||||||||||||||||||| || |||
seq2  ACACATGTCATAAAATCTTATCTATTATCATGGAACAGACTTATTTTTTG  600

seq1  CTTGTTCAG-TTTTGTACAACTTTCTGATC-AACATTTTCATTTTTGAGT  647
      ||||||||| |||||||||||||||||||| |||||||||||||||||||
seq2  CTTGTTCAGTTTTTGTACAACTTTCTGATCAAACATTTTCATTTTTGAGT  650

seq1  AATCAAATTGAGGAACTTTACATTTTTGTTAGGATACATTCA-TTTTAGT  696
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AATCAAATTGAGGAACTTTACATTTTTGTTAGGATACATTCATTTTTAGT  700

seq1  CATTTCCAGACCCATAAAAAGCTATATGCTCATTCCCTAAGTCATTTTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCCAGACCCATAAAAAGCTATATGCTCATTCCCTAAGTCATTTTGA  750

seq1  CCTATCAATCTTTCTGATAGATTGGGGCTAGGTGCTACTCAGGCTATGCT  796
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTATCAATCTTTCTGATAGA-TGGGGCTAGGTGCTACTCAGGCTATGCT  799

seq1  CACC-TTCA-GGAGCCCC-TTCTCTCCTCGGTTGCTCTAAAAGTAATGG-  842
      |||| |||| |||||||| |||||||||||||||||||||||||||||| 
seq2  CACCTTTCAGGGAGCCCCTTTCTCTCCTCGGTTGCTCTAAAAGTAATGGA  849

seq1  AGAGGTAACC-TTAAATGGCACTTGGTAATTTTCTGATGCTCACTTTATT  891
      |||||||||| |||| |||||||||||||||||||||||||||| || ||
seq2  AGAGGTAACCTTTAATTGGCACTTGGTAATTTTCTGATGCTCACCTTTTT  899

seq1  ATGCTATGAATGTGACATATCCAGTCTGATACAATGGACACATAAACTAA  941
      |||||||||||| ||||| ||||||||||||||||||||||||||||| |
seq2  ATGCTATGAATGGGACAT-TCCAGTCTGATACAATGGACACATAAACT-A  947

seq1  AAAGCTGAGCCTTTGCCATCTGTGAATTGGAAGAAGCCTTATAATAAGTA  991
      ||||||||| ||||  | |||||||||||||||||||||||||   ||||
seq2  AAAGCTGAGTCTTTTGCCTCTGTGAATTGGAAGAAGCCTTATA--TAGTA  995

seq1  CATTCAATAGGCGTCTAGTAAGCTATACTGTGTAAAACTTCCTCTCTACC  1041
      ||||| ||||||||| ||||   ||||||| |  |||| ||||||||  |
seq2  CATTC-ATAGGCGTCCAGTAGCTTATACTGCGGTAAACCTCCTCTCTTAC  1044

seq1  TTTCTACCTCCGAAAGAGGACACACCTGCTTGACCTCAGTAACCTCAACC  1091
      ||||  |||||||| ||||  ||| |||| ||| |||||||| ||||| |
seq2  TTTCACCCTCCGAAGGAGG--ACAACTGC-TGAACTCAGTAA-CTCAA-C  1089

seq1  CCTTTCACTATCCCCCCAAAACTTTCTTTCATTGATCTTAGTAATTCCCT  1141
      |||||||| || ||| ||||||||||||||  ||  |||||| |||||||
seq2  CCTTTCAC-ATTCCCTCAAAACTTTCTTTC--TGTACTTAGT-ATTCCCT  1135


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