BAC Information

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BAC

Clone NameB6Ng01-124E10
Chromosome1 (Build37)
Map Location 97,199,891 - 97,365,263
singlet/doubletdoublet
Overlap geneTmem157
Upstream geneLOC666025, LOC100040685, LOC383603
Downstream geneLOC100041686, Rnu7-ps2, St8sia4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124E10.bB6Ng01-124E10.g
ACCDH927224DH927225
length1,104571
definitionDH927224|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E10, 5' end.DH927225|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,199,891 - 97,200,996)(97,364,689 - 97,365,263)
sequence
gaattcactgtttggacgtaacacatctcagttatctttttatttattgg
aggatttttgggttgtttccatttcctggctagtgtgaataggtaagact
gaatattgctgagcaagattcacaaaacatgtagagtcctttgggcgcat
accagggagtgatatagttggataaatagtaggtaaatttatttttagtt
actttttggtttctgtttgttttgttgtttttgttttgttttgttttgtt
gagtgatactacacactaattagtaaaacagatgcacttatttgcatttc
cattaacagtgaatgagtttccctttcttcacaacctcatgggcatttgt
cagtcattttgcaaaatgccaagggatagaaagaattaagcagtcttact
gatctgtaacagctaagaaccacgtcaaaatatccactaagttacaatca
atgtttcacatatttcagtggtaaccaacagcttcctaaattgacttaaa
gtacaccaaatgtgattgatgtaattttctttaattataaacacattttt
aaaatattagatttttttattttaaatgttgttttgtatcttatatcatg
agcaatggttttatggtgcattggattttacgtgtgatctaaaatctgaa
ttttaaatccttccaagttattcattttacttctaacatatttactttaa
acaacaacaataagaaagatactctgaaatgcctgaaatggagttctaat
actttgctgtaattttgtctctttatgtgttcacttatttatgcttttct
tgacatggtcccttgggactcacacttgaaagacaagcgtgccagctctc
aggtcaccccaattcttttgctatagtttgaataatccaagaagccatgg
tttgcaacattcataccgttgtctgaagatggcagtctgtaaagttctct
tacagaatgagatattttcttcaagaacttcattaatattcgtatgcttg
gaaatgcactttaccgcagcctatgaagcgactttcattcatttagcttt
gcaaataaactttactagcttctcagttcagatccctgaccatataatta
aatt
tctgtttaactctgtaccccagttttaatagggttatttggttctctgaa
gtttagcttcttgagttctttgtatattttgcatattgcctgctcttggc
cagcagctctaggctgagaggagagaacttggtccagccaagtctctcca
gggctgaaacaggatggtgaatgtcacagctcagatctcctgcagactgg
agaataaccaccctgagccagaagtctgtcaaagcaggaacttaattgta
tcagtcttttgtttatagagggctgagagaggaggtgggaatttttttgc
taaggtgagatgacataggggaagaggaaggacgaggaagggtatggggt
gactgatagagccaacaaagttactctatgttagcagtagctaagcagag
acaggcttaagcaggtcatgctgagtcactccagtacggaagtgactgag
acagttttcaaaactcaagccaggctggggtttgtcctcaagacccaaac
caggggccaaatagggcccaacagcatattattcttctattagatgtaga
gtttggtaaagatgtttcccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_97199891_97200996
seq2: B6Ng01-124E10.b_50_1150

seq1  TTCACTGTTTGGACGTAACACATCTCAGTTATCTTTTTATTTATTGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGTTTGGACGTAACACATCTCAGTTATCTTTTTATTTATTGGAGG  50

seq1  ATTTTTGGGTTGTTTCCATTTCCTGGCTAGTGTGAATAGGTAAGACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGGGTTGTTTCCATTTCCTGGCTAGTGTGAATAGGTAAGACTGAA  100

seq1  TATTGCTGAGCAAGATTCACAAAACATGTAGAGTCCTTTGGGCGCATACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTGAGCAAGATTCACAAAACATGTAGAGTCCTTTGGGCGCATACC  150

seq1  AGGGAGTGATATAGTTGGATAAATAGTAGGTAAATTTATTTTTAGTTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTGATATAGTTGGATAAATAGTAGGTAAATTTATTTTTAGTTACT  200

seq1  TTTTGGTTTCTGTTTGTTTTGTTGTTTTTGTTTTGTTTTGTTTTGTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGTTTCTGTTTGTTTTGTTGTTTTTGTTTTGTTTTGTTTTGTTGAG  250

seq1  TGATACTACACACTAATTAGTAAAACAGATGCACTTATTTGCATTTCCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATACTACACACTAATTAGTAAAACAGATGCACTTATTTGCATTTCCAT  300

seq1  TAACAGTGAATGAGTTTCCCTTTCTTCACAACCTCATGGGCATTTGTCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTGAATGAGTTTCCCTTTCTTCACAACCTCATGGGCATTTGTCAG  350

seq1  TCATTTTGCAAAATGCCAAGGGATAGAAAGAATTAAGCAGTCTTACTGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGCAAAATGCCAAGGGATAGAAAGAATTAAGCAGTCTTACTGAT  400

seq1  CTGTAACAGCTAAGAACCACGTCAAAATATCCACTAAGTTACAATCAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACAGCTAAGAACCACGTCAAAATATCCACTAAGTTACAATCAATG  450

seq1  TTTCACATATTTCAGTGGTAACCAACAGCTTCCTAAATTGACTTAAAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACATATTTCAGTGGTAACCAACAGCTTCCTAAATTGACTTAAAGTA  500

seq1  CACCAAATGTGATTGATGTAATTTTCTTTAATTATAAACACATTTTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATGTGATTGATGTAATTTTCTTTAATTATAAACACATTTTTAAA  550

seq1  ATATTAGATTTTTTTATTTTAAATGTTGTTTTGTATCTTATATCATGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGATTTTTTTATTTTAAATGTTGTTTTGTATCTTATATCATGAGC  600

seq1  AATGGTTTTATGGTGCATTGGATTTTACGTGTGATCTAAAATCTGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTTTTATGGTGCATTGGATTTTACGTGTGATCTAAAATCTGAATTT  650

seq1  TAAATCCTTCCAAGTTATTCATTTTACTTCTAACATATTTACTTTAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCTTCCAAGTTATTCATTTTACTTCTAACATATTTACTTTAAACA  700

seq1  ACAACAATAAGAAAGATACTCTGAAATGCCTGAAATGGAGTTCTAATACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAATAAGAAAGATACTCTGAAATGCCTGAAATGGAGTTCTAATACT  750

seq1  TTGCTGTAA-TTTGTCTCTTTATGTGTTCACTTATTTATGC-TTTCTTGA  798
      ||||||||| ||||||||||||||||||||||||||||||| ||||||||
seq2  TTGCTGTAATTTTGTCTCTTTATGTGTTCACTTATTTATGCTTTTCTTGA  800

seq1  CATGGTCCCTTGGGACTCACACTTGAAAGACAAGCGTGCCAGCTCTCAGG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCCCTTGGGACTCACACTTGAAAGACAAGCGTGCCAGCTCTCAGG  850

seq1  TCACCCCAATTCTTTTGCTATAGTTTGAATAATCCAAGAAGCCATGGTTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCCAATTCTTTTGCTATAGTTTGAATAATCCAAGAAGCCATGGTTT  900

seq1  GCAAACATTCAATACCGTTGTCTGAAGATGGCAGTCTGTAAAGTTCTCTT  948
      || ||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GC-AACATTC-ATACCGTTGTCTGAAGATGGCAGTCTGTAAAGTTCTCTT  948

seq1  ACAGAATGAGATATTTCCTCAAAGAAACTTCAATAATA-TCGTATGCCTG  997
      |||||||||||||||| ||  ||| ||||||| ||||| |||||||| ||
seq2  ACAGAATGAGATATTTTCTTCAAG-AACTTCATTAATATTCGTATGCTTG  997

seq1  GAAATGCCACTTTACCGCAG-CTATGAAAGCGACTTTCATTCCATTTAGC  1046
      |||||| ||||||||||||| ||||| |||||||||||||| ||||||||
seq2  GAAATG-CACTTTACCGCAGCCTATG-AAGCGACTTTCATT-CATTTAGC  1044

seq1  TTTGCAAAATAAACTTCA-TAGCTTTCTCAGTTCAAGTACCCTGACATTA  1095
      ||||| |||||||||| | |||| |||||||||| ||  |||||||  ||
seq2  TTTGC-AAATAAACTTTACTAGC-TTCTCAGTTC-AGATCCCTGACCATA  1091

seq1  TAAATTAAATT  1106
      | |||||||||
seq2  T-AATTAAATT  1101

seq1: chr1_97364689_97365263
seq2: B6Ng01-124E10.g_69_645 (reverse)

seq1  GGGGAAACATCTTTACC-AACTCTACATCTAATAGAAGAATAATATGCTG  49
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GGGGAAACATCTTTACCAAACTCTACATCTAATAGAAGAATAATATGCTG  50

seq1  TTGGGCCCTATTTGG-CCCTGGTTTGGGTCTTGAGGACAAACCCCAGCCT  98
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTGGGCCCTATTTGGCCCCTGGTTTGGGTCTTGAGGACAAACCCCAGCCT  100

seq1  GGCTTGAGTTTTGAAAACTGTCTCAGTCACTTCCGTACTGGAGTGACTCA  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGAGTTTTGAAAACTGTCTCAGTCACTTCCGTACTGGAGTGACTCA  150

seq1  GCATGACCTGCTTAAGCCTGTCTCTGCTTAGCTACTGCTAACATAGAGTA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACCTGCTTAAGCCTGTCTCTGCTTAGCTACTGCTAACATAGAGTA  200

seq1  ACTTTGTTGGCTCTATCAGTCACCCCATACCCTTCCTCGTCCTTCCTCTT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTTGGCTCTATCAGTCACCCCATACCCTTCCTCGTCCTTCCTCTT  250

seq1  CCCCTATGTCATCTCACCTTAGCAAAAAAATTCCCACCTCCTCTCTCAGC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTATGTCATCTCACCTTAGCAAAAAAATTCCCACCTCCTCTCTCAGC  300

seq1  CCTCTATAAACAAAAGACTGATACAATTAAGTTCCTGCTTTGACAGACTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTATAAACAAAAGACTGATACAATTAAGTTCCTGCTTTGACAGACTT  350

seq1  CTGGCTCAGGGTGGTTATTCTCCAGTCTGCAGGAGATCTGAGCTGTGACA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTCAGGGTGGTTATTCTCCAGTCTGCAGGAGATCTGAGCTGTGACA  400

seq1  TTCACCATCCTGTTTCAGCCCTGGAGAGACTTGGCTGGACCAAGTTCTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATCCTGTTTCAGCCCTGGAGAGACTTGGCTGGACCAAGTTCTCT  450

seq1  CCTCTCAGCCTAGAGCTGCTGGCCAAGAGCAGGCAATATGCAAAATATAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAGCCTAGAGCTGCTGGCCAAGAGCAGGCAATATGCAAAATATAC  500

seq1  AAAGAACTCAAGAAGCTAAACTTCAGAGAACCAAATAACCCTATTAAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTCAAGAAGCTAAACTTCAGAGAACCAAATAACCCTATTAAAAC  550

seq1  TGGGGTACAGAGTTAAACAGAGAATTC  575
      |||||||||||||||||||||||||||
seq2  TGGGGTACAGAGTTAAACAGAGAATTC  577