BAC Information

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BAC

Clone NameB6Ng01-124E22
Chromosome1 (Build37)
Map Location 7,164,405 - 7,165,409
singlet/doubletsinglet
Overlap genenone
Upstream gene4732440D04Rik, Rb1cc1, EG620393, LOC100039302, LOC664946, St18, LOC665015, LOC665027, LOC100039347, LOC435608, Pcmtd1
Downstream geneLOC545302, LOC665063, LOC665069, LOC100039408
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124E22.bB6Ng01-124E22.g
ACCDH927248DH927249
length1,2381,002
definitionDH927248|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E22, 5' end.DH927249|Mus musculus domesticus DNA, BAC clone: B6Ng01-124E22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagagatagaagagagaatctcaggagcagaagataccatagaa
aacattgacacaatactcaaagaaaatataaaaagttaaaaagaagctcc
taaccccaaacatccaggaaatccagaaaacaataagaccaaatctaaga
gagtgaagattcccaacttattgggccagtaaatatcttcaacaaaatta
tagaagaaaactttcctaacctaaagaaagagatgcccatgaattgttgc
cttgaattcctggtctttccaagacttttatcatgaagggtgttagactt
tgtcaaatgctttgtcaacatctaatgagatgattatgtggtttttgtct
ttgagtttgtttatatagtgaattatgttgatggattttcgtatattgaa
ttatctttgcatccctggtacaacccattttcaaatgaccttacttacca
caattaaaatatgacactttgatttttcttaataattttagaaattattt
ctcctatcagagtagcatcataaatgaaagatccaatatcagctgtattt
ttaacctattcatctattgttagtgatcttgcctttaaaggtctcaccac
cctttgctttctgaattcgccaaagtttttattagcatttttctggcttc
tgcatctaatactattctagttacagctgaagttgtcgtactttacaaaa
agatagtaaaggcttcttttgggccttgtataattttagtaaatgattca
gatctattttctgattcttcgactttgtctcaagcatttaaagctgctaa
gtgacatagcatcaaattcaacctgcctttgttactcagaatttttgacc
ttcactagcaactatcttgtgaaacagtaatacctctagttctgtttcat
tttctatggtcctaacttcttctttccccatgtcaaccattgtaactcag
gaacagcttccatattgctgttaccaactgtttatagtcttctaacagat
atgctgttctgagttgccaggaatttaaattctgctccataggatacatg
cataccattggaaacccacttctcttgaatctccttaaatctagcatgtc
ataggatgcaatttaattctccctaacggtttgaagtgtcattactcctg
gagccatggatatattgggaaaaaagtggtatacaaccacagactctgta
gcggtcaccactctacgtacttcatgggtgggaccaag
gaattctctcctgagaaacctgaatgtaaatacaactcatttgcacagca
actacattctaactgctcccacagtgaataaggattctctttccctacac
cttagtcagcatttgttgttgtccgttttattgatgatagccattctggt
gggagtgaggtagaatttcaaagtagttttggtttacatttccctgatgt
atggggaatcttgaacacttgaaatgcatttggttatttttttcttcttt
tgagaactctgttaggtttcatagcccatttaaattatttttcttgcttt
tttttgagtctttatgcattacgaatagtaataatctgtcacatgaagtt
ttcctttcattctttaggttgcctcttcattattaccacattcctatgtt
gtacatgaggttccatctattgatttttggttcctgaaggagagagaaag
atgaagcatgaagatcggatcttccaaaagagatttcagctatctagagc
acacctgagacatacttgaattctagttctgtcctccaaagaacttctct
tatgtttgtttttatcaacatactacaagtgtttaggggttctgtggttc
actggggtgtgtgaacttctgttagatgaaacagaagggtgctaggctac
attccatccttacagacaaaggggtctagtggtttctgcacgaaacataa
gatgaaggccccaacctgagaaatagtgcaggctgaggctaatgagacag
gttcccaaactcctgggtgtccattcactgctgagaacctcatggaaaga
gggattatatttgaccagggtaggggtaactccagcttaaattaggagtg
agtgttcatgtctggaggggagagggccttctgtgggaagtttaggtgaa
acagctctatatgatgaaggcttcaccccccagcaggtcttgatgagaag
aaacagactttgcttgtcaaacagttattctttgttcatcgtgggaaatg
gg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_7164405_7165409
seq2: B6Ng01-124E22.g_68_1069

seq1  GAATTCTCTCCTGAGAAACCTGAATGTAAATACAACTCATTTGCACAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTGAGAAACCTGAATGTAAATACAACTCATTTGCACAGCA  50

seq1  ACTACATTCTAACTGCTCCCACAGTGAATAAGGATTCTCTTTCCCTACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATTCTAACTGCTCCCACAGTGAATAAGGATTCTCTTTCCCTACAC  100

seq1  CTTAGTCAGCATTTGTTGTTGTCCGTTTTATTGATGATAGCCATTCTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCAGCATTTGTTGTTGTCCGTTTTATTGATGATAGCCATTCTGGT  150

seq1  GGGAGTGAGGTAGAATTTCAAAGTAGTTTTGGTTTACATTTCCCTGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGAGGTAGAATTTCAAAGTAGTTTTGGTTTACATTTCCCTGATGT  200

seq1  ATGGGGAATCTTGAACACTTGAAATGCATTTGGTTATTTTTTTCTTCTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGAATCTTGAACACTTGAAATGCATTTGGTTATTTTTTTCTTCTTT  250

seq1  TGAGAACTCTGTTAGGTTTCATAGCCCATTTAAATTATTTTTCTTGCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAACTCTGTTAGGTTTCATAGCCCATTTAAATTATTTTTCTTGCTTT  300

seq1  TTTTTGAGTCTTTATGCATTACGAATAGTAATAATCTGTCACATGAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAGTCTTTATGCATTACGAATAGTAATAATCTGTCACATGAAGTT  350

seq1  TTCCTTTCATTCTTTAGGTTGCCTCTTCATTATTACCACATTCCTATGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTCATTCTTTAGGTTGCCTCTTCATTATTACCACATTCCTATGTT  400

seq1  GTACATGAGGTTCCATCTATTGATTTTTGGTTCCTGAAGGAGAGAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATGAGGTTCCATCTATTGATTTTTGGTTCCTGAAGGAGAGAGAAAG  450

seq1  ATGAAGCATGAAGATCGGATCTTCCAAAAGAGATTTCAGCTATCTAGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCATGAAGATCGGATCTTCCAAAAGAGATTTCAGCTATCTAGAGC  500

seq1  ACACCTGAGACATACTTGAATTCTAGTTCTGTCCTCCAAAGAACTTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGAGACATACTTGAATTCTAGTTCTGTCCTCCAAAGAACTTCTCT  550

seq1  TATGTTTGTTTTTATCAACATACTACAAGTGTTTA-GGGTTCTGTGGTTC  599
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TATGTTTGTTTTTATCAACATACTACAAGTGTTTAGGGGTTCTGTGGTTC  600

seq1  ACTGGGGTGTGTGAACTTCTGTTAGATGAAACAGAAGGGTGCTAGGCTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGTGTGTGAACTTCTGTTAGATGAAACAGAAGGGTGCTAGGCTAC  650

seq1  ATTCCATCCTTACAGACAAAGGGGTCTAGTGGTTTCTGCACGAAACATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCATCCTTACAGACAAAGGGGTCTAGTGGTTTCTGCACGAAACATAA  700

seq1  GATGAAGGCCCCAACCTGAGAAATAGTGCAGGCTGAGGCTAATGAGACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGGCCCCAACCTGAGAAATAGTGCAGGCTGAGGCTAATGAGACAG  750

seq1  GTTCCCAAACTCCTGGGTGTCCATTCACTGCTGAGAACCTCATGGAAAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCCAAACTCCTGGGTGTCCATTCACTGCTGAGAACCTCATGGAAAGA  800

seq1  GGGGATTATATTTGACCAGGGTAAGGGGTAACTCCAGCTTAAATTAGGAG  849
       ||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  -GGGATTATATTTGACCAGGGT-AGGGGTAACTCCAGCTTAAATTAGGAG  848

seq1  TGAGTGTTCATGTCTGGAGGGGAGAGGGGCCTTCTGTGGGAGATTTAGGT  899
      ||||||||||||||||||||||||| |||||||||||||||  |||||||
seq2  TGAGTGTTCATGTCTGGAGGGGAGA-GGGCCTTCTGTGGGAAGTTTAGGT  897

seq1  GACACAGCTCTATATGATGAAGGCTTCACCCCACAGCAGGTCTTGATGAG  949
      || ||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GAAACAGCTCTATATGATGAAGGCTTCACCCCCCAGCAGGTCTTGATGAG  947

seq1  -AGAGACAGTCCTTGCTTGTCCAAACAGTTTATTCTTTGTTCATCGTGGG  998
       ||| |||| | |||||||| ||||||| |||||||||||||||||||||
seq2  AAGAAACAGACTTTGCTTGT-CAAACAG-TTATTCTTTGTTCATCGTGGG  995

seq1  AAATGGG  1005
      |||||||
seq2  AAATGGG  1002