BAC Information

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BAC

Clone NameB6Ng01-124G23
Chromosome1 (Build37)
Map Location 126,158,961 - 126,287,338
singlet/doubletdoublet
Overlap genenone
Upstream geneDpp10
Downstream geneLOC666998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124G23.bB6Ng01-124G23.g
ACCDH927344DH927345
length8241,083
definitionDH927344|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G23, 5' end.DH927345|Mus musculus domesticus DNA, BAC clone: B6Ng01-124G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,158,961 - 126,159,784)(126,286,261 - 126,287,338)
sequence
gaattcagtccctatgcaaggacactgagccttctctggagcacccaaat
aaatgtgttttaaaaccatgatgcatgctatataatgaaactagtaccct
ttccctggaatgaccatctaaaatttctttatttatatgagaatggcatt
gaagagaaagtctttctatgccatataacattcttgcctaggaagtagaa
ttcaagtaacagttgctaggaaacacattttgaattttctttgaggaata
acggaatctgtgccctttattttcaatttctctaatgaccaaaggcatgt
cttcaactcttcttaatctatattctttctgggcacttgggaaacattta
ttgctgcataaagaaatcaattctttctttaaatgaacctaaaatctgtt
tttaactcatgttttgggaacaattgtactatcttccttgtgcaagtaca
tgccaaattaatctctggattttcttttcaaaattctttgcttactagtg
ctttaaaattctgtggtggttatcctcaggaatatatactgtgacatttt
aatttgctctgttaaacaaatttgtataacagcattgcttgaaggaacta
acaggagtcaaggaaattattctcttccatttcaccagagatatatgaat
cctactttaaagattttgcaagttatagtactgtactgtctctgtaaagt
ttgtttaatggtagaaagattcagatgaggttttagaataataattgggg
gcaaaaaataaaacaaaaccaacacacacacacacacacacacacacaga
gaggggggtagagggagggagagg
gaattccatcttggttgtaatgacacacaacttttctttggctacatgcc
tccctgtgataagattgctgaacaaaacatagataatttagaagtgttca
aattttgcagaggtttacagaacaacagaaaaaaagcaatcttctcccca
ctgattatttttagaatgtgtccttaaatttcagagtttgtcattatctt
tccaagagcttatctgtattgacctttcctatcccttttttaacatctta
aaagcttcaatcatatctcaactcttcaatgtcttctctccaactattgt
aatttcagtttttctggctttcagaagtaatataacctcctttcacattt
atcattctggtcccgtcaatcccttctgcctcctcaatgtcttttcagca
acattattcctttccctactgagggagattgtctcaaatggcaagtcacc
gagtgtacttaatcagctaccattacagtgcctggcttcccacgacatgt
ttgtagcccatttcataaatttattgttcttaaaagcaaacctaattttg
caatgaaactatccaatccccttttcatcaaaaaccaaggtaaaatatgt
ctttggtgtaaacagtcctattgagctgctgagatctaattggagtcagt
tcacactgtcttctctgaaaccattcctcttagacttctcattacagcgg
gtatagcttttgatccatcccagttttcttttgtctctcatttctttcct
atgttgttctccttaactcacagagtgatcagagcagtattatgacccac
tgcccatgttgtactgtgcacacagaaatcttagtatagcaggagttctt
ttattacaatagaatccttaaatgcccaaaggatgagacttccaccaagg
ctgtcagccttgttcaagatcatgtgctatgttttttctgacttcatttt
tcactatgccaagaatcctgaaactagaactttcaacagcgagtttaaac
atggtattattaccaagttcgtgctagaatcgagagaatttctcattttg
tgaacatcagaaggtttgggtgctattggcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126158961_126159784
seq2: B6Ng01-124G23.b_47_870

seq1  GAATTCAGTCCCTATGCAAGGACACTGAGCCTTCTCTGGAGCACCCAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTCCCTATGCAAGGACACTGAGCCTTCTCTGGAGCACCCAAAT  50

seq1  AAATGTGTTTTAAAACCATGATGCATGCTATATAATGAAACTAGTACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTGTTTTAAAACCATGATGCATGCTATATAATGAAACTAGTACCCT  100

seq1  TTCCCTGGAATGACCATCTAAAATTTCTTTATTTATATGAGAATGGCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGGAATGACCATCTAAAATTTCTTTATTTATATGAGAATGGCATT  150

seq1  GAAGAGAAAGTCTTTCTATGCCATATAACATTCTTGCCTAGGAAGTAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAAAGTCTTTCTATGCCATATAACATTCTTGCCTAGGAAGTAGAA  200

seq1  TTCAAGTAACAGTTGCTAGGAAACACATTTTGAATTTTCTTTGAGGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGTAACAGTTGCTAGGAAACACATTTTGAATTTTCTTTGAGGAATA  250

seq1  ACGGAATCTGTGCCCTTTATTTTCAATTTCTCTAATGACCAAAGGCATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAATCTGTGCCCTTTATTTTCAATTTCTCTAATGACCAAAGGCATGT  300

seq1  CTTCAACTCTTCTTAATCTATATTCTTTCTGGGCACTTGGGAAACATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACTCTTCTTAATCTATATTCTTTCTGGGCACTTGGGAAACATTTA  350

seq1  TTGCTGCATAAAGAAATCAATTCTTTCTTTAAATGAACCTAAAATCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCATAAAGAAATCAATTCTTTCTTTAAATGAACCTAAAATCTGTT  400

seq1  TTTAACTCATGTTTTGGGAACAATTGTACTATCTTCCTTGTGCAAGTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTCATGTTTTGGGAACAATTGTACTATCTTCCTTGTGCAAGTACA  450

seq1  TGCCAAATTAATCTCTGGATTTTCTTTTCAAAATTCTTTGCTTACTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAAATTAATCTCTGGATTTTCTTTTCAAAATTCTTTGCTTACTAGTG  500

seq1  CTTTAAAATTCTGTGGTGGTTATCCTCAGGAATATATACTGTGACATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATTCTGTGGTGGTTATCCTCAGGAATATATACTGTGACATTTT  550

seq1  AATTTGCTCTGTTAAACAAATTTGTATAACAGCATTGCTTGAAGGAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCTCTGTTAAACAAATTTGTATAACAGCATTGCTTGAAGGAACTA  600

seq1  ACAGGAGTCAAGGAAATTATTCTCTTCCATTTCACCAGAGATATATGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGTCAAGGAAATTATTCTCTTCCATTTCACCAGAGATATATGAAT  650

seq1  CCTACTTTAAAGATTTTGCAAGTTATAGTACTGTACTGTCTCTGTAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTTAAAGATTTTGCAAGTTATAGTACTGTACTGTCTCTGTAAAGT  700

seq1  TTGTTTAATGGTAGAAAGATTCAGATGAGGTTTTAGAATAATAATTGGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAATGGTAGAAAGATTCAGATGAGGTTTTAGAATAATAATTGGGG  750

seq1  GCAAAAAATAAAACAAAACCAACACACACACACACACACACACACACAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAATAAAACAAAACCAACACACACACACACACACACACACACAGA  800

seq1  GAGGGGGGTAGAGGGAGGGAGAGG  824
      ||||||||||||||||||||||||
seq2  GAGGGGGGTAGAGGGAGGGAGAGG  824

seq1: chr1_126286261_126287338
seq2: B6Ng01-124G23.g_70_1152 (reverse)

seq1  AATGCAAATAGCACACAAGCATTCTGATAGTCACAAAATGAGAA--TCTC  48
      ||||| |||||||| ||| | |||||||  ||||||||||||||  ||||
seq2  AATGCCAATAGCACCCAAACCTTCTGATGTTCACAAAATGAGAAATTCTC  50

seq1  TCGATCTTAGCACGAACCTGGTAATAGTACAGTG-TTAGACTCGCTGTTG  97
      |||||  |||||||||| |||||||| |||  || ||| |||||||||||
seq2  TCGATTCTAGCACGAACTTGGTAATAATACCATGTTTAAACTCGCTGTTG  100

seq1  AAAGTTCTAGTTTCA-GATTCTTGGCATAGTGAAAAATGAAGGTCAGAAA  146
      ||||||||||||||| ||||||||||||||||||||||||| ||||||||
seq2  AAAGTTCTAGTTTCAGGATTCTTGGCATAGTGAAAAATGAA-GTCAGAAA  149

seq1  AAACATAGCACATGATCTTGAACAAGGCTGACAGCCTTGGTGGAAGTCTC  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAGCACATGATCTTGAACAAGGCTGACAGCCTTGGTGGAAGTCTC  199

seq1  ATCCTTTGGGCATTTTAAGGA-TCTAATGT-ATAAAAG-ACTCCTGCTAT  243
      |||||||||||| |||||||| |||| ||| ||||||| |||||||||||
seq2  ATCCTTTGGGCA-TTTAAGGATTCTATTGTAATAAAAGAACTCCTGCTAT  248

seq1  ACCTAGATTACTGTGTGCACAGTACAACATGGGCAGTGGGTCAT-ATACT  292
      ||  ||||| |||||||||||||||||||||||||||||||||| |||||
seq2  ACTAAGATTTCTGTGTGCACAGTACAACATGGGCAGTGGGTCATAATACT  298

seq1  GCTCTGATCACTCTGTGAGTTAAGGAGAAACAACATAGGGAAGAAATGAG  342
      ||||||||||||||||||||||||||| ||||||||||| ||||||||||
seq2  GCTCTGATCACTCTGTGAGTTAAGGAG-AACAACATAGGAAAGAAATGAG  347

seq1  AGACAAAAGAAAACTGGGATTGGATC-AAAGCTATACCCGCTGTAATGAG  391
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  AGACAAAAGAAAACTGGGA-TGGATCAAAAGCTATACCCGCTGTAATGAG  396

seq1  AAGTCTAAGAGGAATGGTTTCAGAGAAGACAGTGTGAACTGACTCCAATT  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAAGAGGAATGGTTTCAGAGAAGACAGTGTGAACTGACTCCAATT  446

seq1  AGATCTCAGCAGCTCAATAGGACTGTTTACACCAAAGACATATTTTACCT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCAGCAGCTCAATAGGACTGTTTACACCAAAGACATATTTTACCT  496

seq1  TGGTTTTTGATGAAAAGGGGATTGGATAGTTTCATTGCAAAATTAGGTTT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTTTGATGAAAAGGGGATTGGATAGTTTCATTGCAAAATTAGGTTT  546

seq1  GCTTTTAAGAACAATAAATTTATGAAATGGGCTACAAACATGTCGTGGGA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAAGAACAATAAATTTATGAAATGGGCTACAAACATGTCGTGGGA  596

seq1  AGCCAGGCACTGTAATGGTAGCTGATTAAGTACACTCGGTGACTTGCCAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGCACTGTAATGGTAGCTGATTAAGTACACTCGGTGACTTGCCAT  646

seq1  TTGAGACAATCTCCCTCAGTAGGGAAAGGAATAATGTTGCTGAAAAGACA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACAATCTCCCTCAGTAGGGAAAGGAATAATGTTGCTGAAAAGACA  696

seq1  TTGAGGAGGCAGAAGGGATTGACGGGACCAGAATGATAAATGTGAAAGGA  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGGCAGAAGGGATTGACGGGACCAGAATGATAAATGTGAAAGGA  746

seq1  GGTTATATTACTTCTGAAAGCCAGAAAAACTGAAATTACAATAGTTGGAG  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATATTACTTCTGAAAGCCAGAAAAACTGAAATTACAATAGTTGGAG  796

seq1  AGAAGACATTGAAGAGTTGAGATATGATTGAAGCTTTTAAGATGTTAAAA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACATTGAAGAGTTGAGATATGATTGAAGCTTTTAAGATGTTAAAA  846

seq1  AAGGGATAGGAAAGGTCAATACAGATAAGCTCTTGGAAAGATAATGACAA  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATAGGAAAGGTCAATACAGATAAGCTCTTGGAAAGATAATGACAA  896

seq1  ACTCTGAAATTTAAGGACACATTCTAAAAATAATCAGTGGGGAGAAGATT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAAATTTAAGGACACATTCTAAAAATAATCAGTGGGGAGAAGATT  946

seq1  GCTTTTTTTCTGTTGTTCTGTAAACCTCTGCAAAATTTGAACACTTCTAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTTTTCTGTTGTTCTGTAAACCTCTGCAAAATTTGAACACTTCTAA  996

seq1  ATTATCTATGTTTTGTTCAGCAATCTTATCACAGGGAGGCATGTAGCCAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTATGTTTTGTTCAGCAATCTTATCACAGGGAGGCATGTAGCCAA  1046

seq1  AGAAAAGTTGTGTGTCATTACAACCAAGATGGAATTC  1078
      |||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGTTGTGTGTCATTACAACCAAGATGGAATTC  1083