BAC Information

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BAC

Clone NameB6Ng01-124L01
Chromosome1 (Build37)
Map Location 125,225,746 - 125,369,653
singlet/doubletdoublet
Overlap geneDpp10
Upstream geneLOC666983
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124L01.bB6Ng01-124L01.g
ACCDH927532DH927533
length1,130264
definitionDH927532|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L01, 5' end.DH927533|Mus musculus domesticus DNA, BAC clone: B6Ng01-124L01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,368,520 - 125,369,653)(125,225,746 - 125,226,009)
sequence
gaattcaccaatttggctaggccagctgtccattgaaacctagtgatcct
cctatctctgcctttcaagccctggaattacagacacaggcttttgtgtt
tggtattatatatgtatgtgctgtgagtctaatatagatcccatgattct
ttttagtaataatttcaaggatggaacaacctctacaacatgagagttgt
tggtttattatttttagtgtgacttcaaaaatcaattttctttctattct
gcatccctaatttcacatccactttctttattagatattttcctcattta
catttcaaatgctattttatatacataaaacatttagaaaaaattaatag
ggcatgtttggaattgctaagccaaccgggatgagaacacagatcaataa
catgtattctgaagatcaataagaggtttaagaataagaactagtctggc
aacagtagaaagctgaagcatatgtaacacataactggagattctgctag
aacccatggtaaaaccatagcaagtatttctaactcagtgatggtgaagg
tgaaagaggaagtagagccagtgaatgcctgaagctcactggcccactag
cttagtctacttagcaaaggtgaaggtgaaggtgagatcttgactctata
ggaatattagtaactgaggaatgataccaaagattatcttgtgatttcac
acttacagtatgtacatgtgtaccctactaattattgtatcttcatatac
acatgcttgctgtctctcactttctctctgtacacacacatgaaaaaata
ctcatctatactttacacatatacatcacatattcatgtcccagaaaaat
gctaatatgggtttttcagaaatctttaatgtgatatagctgataattat
tatcataaatgtgccactattgtagtagacattatgaattttcaatactt
cacattttgcttgagtttatttatgatacaaggttcttcagattgcaagc
ttcctggcaacattaggttaatgtagttaaaagaataaaaagactacttg
agaaatttaggatatgtttttagatatgtaatttgtctaaaaataattag
agtcataaaattgtcagtaattcttatttt
ccaaaccaggacgtagaggtcagtcatcacacttaagaggttagaccaca
cttaagaaaggctggttgttacaagaggaaaaggttgtcaggccatatgt
ggagggacagagaatagctcatccatgattctgaaatagaagctgtatgc
cttcaggacccaagaaacatggcagaaactcatttatagataactttatt
taaaatctctctctctcgtgctctctctctctctctccctctctctctct
ctctctctctctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_125368520_125369653
seq2: B6Ng01-124L01.b_45_1174 (reverse)

seq1  AAAATAAGAAATAATTTACAGATTTATGACTCTATCTATTGTTAGACAAA  50
      |||||||| ||| | | |||  ||||||||||||  |||| |||||| ||
seq2  AAAATAAG-AATTACTGACAATTTTATGACTCTAATTATTTTTAGAC-AA  48

seq1  ATTACCATATCT-AAAACATATCCTAAA-TTCTC-AGTAGTCTTTTTTTT  97
      |||| ||||||| ||||||||||||||| ||||| |||||||||||| ||
seq2  ATTA-CATATCTAAAAACATATCCTAAATTTCTCAAGTAGTCTTTTTATT  97

seq1  TCTTTTTAACTACA-TAACCTAATGTTTGCCAGGAAGCTTGCAATCTGAA  146
         ||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  --CTTTTAACTACATTAACCTAATG-TTGCCAGGAAGCTTGCAATCTGAA  144

seq1  GAACCCTGTATCAATAAATTAAACTCAAGCAAAATGTGGAAGTATTGAAA  196
      ||||| |||||| ||||| |||||||||||||||||| ||||||||||||
seq2  GAACCTTGTATC-ATAAA-TAAACTCAAGCAAAATGT-GAAGTATTGAAA  191

seq1  ATTCATAATTGTCTACTACAATAGTGGCACATTTATGATAATAATTATCA  246
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAA-TGTCTACTACAATAGTGGCACATTTATGATAATAATTATCA  240

seq1  GCTATATCACATTAAAGA-TTCTGAAAAA-CCATATTAGCATTTTTCTGG  294
      |||||||||||||||||| |||||||||| ||||||||||||||||||||
seq2  GCTATATCACATTAAAGATTTCTGAAAAACCCATATTAGCATTTTTCTGG  290

seq1  GACATGAATATGTGATGTATATGTGTAAAGTATAGATGAGTATTTTTTCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGAATATGTGATGTATATGTGTAAAGTATAGATGAGTATTTTTTCA  340

seq1  TGTGTGTGTACAGAGAGAAAGTGAGAGACAGCAAGCATGTGTATATGAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTACAGAGAGAAAGTGAGAGACAGCAAGCATGTGTATATGAAG  390

seq1  ATACAATAATTAGTAGGGTACACATGTACATACTGTAAGTGTGAAATCAC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATAATTAGTAGGGTACACATGTACATACTGTAAGTGTGAAATCAC  440

seq1  AAGATAATCTTTGGTATCATTCCTCAGTTACTAATATTCCTATAGAGTCA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAATCTTTGGTATCATTCCTCAGTTACTAATATTCCTATAGAGTCA  490

seq1  AGATCTCACCTTCACCTTCACCTTTGCTAAGTAGACTAAGCTAGTGGGCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTCACCTTCACCTTCACCTTTGCTAAGTAGACTAAGCTAGTGGGCC  540

seq1  AGTGAGCTTCAGGCATTCACTGGCTCTACTTCCTCTTTCACCTTCACCAT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGCTTCAGGCATTCACTGGCTCTACTTCCTCTTTCACCTTCACCAT  590

seq1  CACTGAGTTAGAAATACTTGCTATGGTTTTACCATGGGTTCTAGCAGAAT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGTTAGAAATACTTGCTATGGTTTTACCATGGGTTCTAGCAGAAT  640

seq1  CTCCAGTTATGTGTTACATATGCTTCAGCTTTCTACTGTTGCCAGACTAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTTATGTGTTACATATGCTTCAGCTTTCTACTGTTGCCAGACTAG  690

seq1  TTCTTATTCTTAAACCTCTTATTGATCTTCAGAATACATGTTATTGATCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATTCTTAAACCTCTTATTGATCTTCAGAATACATGTTATTGATCT  740

seq1  GTGTTCTCATCCCGGTTGGCTTAGCAATTCCAAACATGCCCTATTAATTT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTCATCCCGGTTGGCTTAGCAATTCCAAACATGCCCTATTAATTT  790

seq1  TTTCTAAATGTTTTATGTATATAAAATAGCATTTGAAATGTAAATGAGGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAATGTTTTATGTATATAAAATAGCATTTGAAATGTAAATGAGGA  840

seq1  AAATATCTAATAAAGAAAGTGGATGTGAAATTAGGGATGCAGAATAGAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCTAATAAAGAAAGTGGATGTGAAATTAGGGATGCAGAATAGAAA  890

seq1  GAAAATTGATTTTTGAAGTCACACTAAAAATAATAAACCAACAACTCTCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGATTTTTGAAGTCACACTAAAAATAATAAACCAACAACTCTCA  940

seq1  TGTTGTAGAGGTTGTTCCATCCTTGAAATTATTACTAAAAAGAATCATGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTAGAGGTTGTTCCATCCTTGAAATTATTACTAAAAAGAATCATGG  990

seq1  GATCTATATTAGACTCACAGCACATACATATATAATACCAAACACAAAAG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATATTAGACTCACAGCACATACATATATAATACCAAACACAAAAG  1040

seq1  CCTGTGTCTGTAATTCCAGGGCTTGAAAGGCAGAGATAGGAGGATCACTA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTCTGTAATTCCAGGGCTTGAAAGGCAGAGATAGGAGGATCACTA  1090

seq1  GGTTTCAATGGACAGCTGGCCTAGCCAAATTGGTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAATGGACAGCTGGCCTAGCCAAATTGGTGAATTC  1130

seq1: chr1_125225746_125226009
seq2: B6Ng01-124L01.g_73_336

seq1  CCAAACCAGGACGTAGAGGTCAGTCATCACACTTAAGAGGTTAGACCACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCAGGACGTAGAGGTCAGTCATCACACTTAAGAGGTTAGACCACA  50

seq1  CTTAAGAAAGGCTGGTTGTTACAAGAGGAAAAGGTTGTCAGGCCATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGAAAGGCTGGTTGTTACAAGAGGAAAAGGTTGTCAGGCCATATGT  100

seq1  GGAGGGACAGAGAATAGCTCATCCATGATTCTGAAATAGAAGCTGTATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGACAGAGAATAGCTCATCCATGATTCTGAAATAGAAGCTGTATGC  150

seq1  CTTCAGGACCCAAGAAACATGGCAGAAACTCATTTATAGATAACTTTATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGGACCCAAGAAACATGGCAGAAACTCATTTATAGATAACTTTATT  200

seq1  TAAAATCTCTCTCTCTCGTGCTCTCTCTCTCTCTCTCCCTCTCTCTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCTCTCTCTCTCGTGCTCTCTCTCTCTCTCTCCCTCTCTCTCTCT  250

seq1  CTCTCTCTCTCTCT  264
      ||||||||||||||
seq2  CTCTCTCTCTCTCT  264