BAC Information

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BAC

Clone NameB6Ng01-125L13
Chromosome1 (Build37)
Map Location 132,008,774 - 132,009,481
singlet/doubletsinglet
Overlap geneThsd7b
Upstream geneLOC100042732, LOC100042745, LOC100042740
Downstream geneDaf2, Cd55, Zp3r, C4bp, C4bp-ps1, Pfkfb2, Yod1, AA986860, Fcamr, Pigr, Faim3, Il24, Il20, Il19, Il10, Mapkapk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125L13.bB6Ng01-125L13.g
ACCDH928277DH928278
length1,245924
definitionDH928277|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L13, 5' end.DH928278|Mus musculus domesticus DNA, BAC clone: B6Ng01-125L13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctatttataagactatacttttgtagacgtggaataagaaccttc
tagacactgagttctgaggaacccagctgtaaggagctgcagggagctag
ttccttttgcttgtgaagggctttacactttacagtatgaaaggctattg
gtgattcagcacaacagtgtgatatttaccactagccatgttttcccagg
aggattgttaagataaccttgaatctttgggacagcaagttatcaactac
ttcttcctttatcgtcaacaaaaaggcttcagtcatcaatgtgtgcctac
acagtgagtttctttctaagtcttttctcagtattctgctttcaaatttt
caggattgtatttatgaatccatttatgtcactatcatgatcacagaaaa
tggttaatcaattgttctaatgagcccaacagtcttaggagtggctccaa
actttgttcagttttggaaaacacatattaatagattgtgattgttgtcc
attgtagcatgtgttaatctttacacatttttacagaaaaggataaccca
taacccaatggtattagtggataaggctataagtgaaaatgtcactttta
tttcctctgatgaagtgatgagataaaagccatatccgagttttatagat
acatggcttggactgagcccagagcatttctacctaactgtccctaggtg
tagatatagaagcttctagtcttcatacaatctaatcttctataaactca
gaccttgaaagcttcaacttccagtctttatctgctaacctaggcctaga
atgtttcagcctccaatacttagtgctgaataaattctactttctagctt
tttctgtattctgtctggcttgttcaactcagcagttcttgctcaaaaac
ctctccaagctcactgattcaattggcttcttttagctctgactgaattg
ctttgcttgaaggattgtctctagactagtgctgagctcactgcactcag
tgtaactgtactgaattgaatgttctgacttaactctctcttctgactga
gctcaaatgactgcatttactgaactgacagcactccactatactgactc
tctaaagctctggactaactgactgccctgaaccccagctgactgacccc
cctgcactgacttaagatagctcttcttcatgggttccattagagttggt
gataccatcttgaacccacttgcccaacatttctgcgaagtttag
gaattcaggcaggaacctgaataaaatgagaaaactgcttggatataaag
gagaatccccaggggaagtagcatatatgacagatgttccctaacttgat
ggggggaataaccagatgtcccttgtggctcgtcctggcatgaaaaccat
gttgtgttttcaaagaaggcaaaggtgggatattattccaactgcagcat
ggagccataaagctatggaaggtttgggatgtaggagtggttccatttat
acttctccaaaagaagctacactggagtggtacagatagatgctgaaggg
cagagaaatttagatgcaaagatgtaggtttaaggtcattgcaggattcc
aggtggtttaataaattgaagatgatgagaatgtcaaatttaggataagt
ttcaaaactacaagacataaaatatgatagttaaatgaccatataatagg
gaagagagaaatacagagatgacagtgaactggctgactgacaggaagaa
tggtggtaccatttgttgagttgggaactgtgacaatcaggcttgacagg
aaaacaagttagctttcaaacacattagatctgagatatgatattaactt
tccaactgagctattataggcctctgttcagtggagagattaaggttata
aatttccctgccattagcttataaatttggtatatgttgataatgttttg
agccctgggtaactccaacatttataagttagtaatattcaaagagaata
tttctaaaaatgagactgagaaatatccaggggaataagaagaaaacaaa
gggaataagaaggcacacaagagagtttttaaagaaaggtgcagtagtca
attatctcaaatgcactgagttgcccgagataggcactgactgctgaact
ggcatgggagtctctgatgattct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_132008774_132009481
seq2: B6Ng01-125L13.g_67_774

seq1  GAATTCAGGCAGGAACCTGAATAAAATGAGAAAACTGCTTGGATATAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCAGGAACCTGAATAAAATGAGAAAACTGCTTGGATATAAAG  50

seq1  GAGAATCCCCAGGGGAAGTAGCATATATGACAGATGTTCCCTAACTTGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCCCCAGGGGAAGTAGCATATATGACAGATGTTCCCTAACTTGAT  100

seq1  GGGGGGAATAACCAGATGTCCCTTGTGGCTCGTCCTGGCATGAAAACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAATAACCAGATGTCCCTTGTGGCTCGTCCTGGCATGAAAACCAT  150

seq1  GTTGTGTTTTCAAAGAAGGCAAAGGTGGGATATTATTCCAACTGCAGCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGTTTTCAAAGAAGGCAAAGGTGGGATATTATTCCAACTGCAGCAT  200

seq1  GGAGCCATAAAGCTATGGAAGGTTTGGGATGTAGGAGTGGTTCCATTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCATAAAGCTATGGAAGGTTTGGGATGTAGGAGTGGTTCCATTTAT  250

seq1  ACTTCTCCAAAAGAAGCTACACTGGAGTGGTACAGATAGATGCTGAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCTCCAAAAGAAGCTACACTGGAGTGGTACAGATAGATGCTGAAGGG  300

seq1  CAGAGAAATTTAGATGCAAAGATGTAGGTTTAAGGTCATTGCAGGATTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATTTAGATGCAAAGATGTAGGTTTAAGGTCATTGCAGGATTCC  350

seq1  AGGTGGTTTAATAAATTGAAGATGATGAGAATGTCAAATTTAGGATAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTTTAATAAATTGAAGATGATGAGAATGTCAAATTTAGGATAAGT  400

seq1  TTCAAAACTACAAGACATAAAATATGATAGTTAAATGACCATATAATAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAAACTACAAGACATAAAATATGATAGTTAAATGACCATATAATAGG  450

seq1  GAAGAGAGAAATACAGAGATGACAGTGAACTGGCTGACTGACAGGAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGAAATACAGAGATGACAGTGAACTGGCTGACTGACAGGAAGAA  500

seq1  TGGTGGTACCATTTGTTGAGTTGGGAACTGTGACAATCAGGCTTGACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGTACCATTTGTTGAGTTGGGAACTGTGACAATCAGGCTTGACAGG  550

seq1  AAAACAAGTTAGCTTTCAAACACATTAGATCTGAGATATGATATTAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGTTAGCTTTCAAACACATTAGATCTGAGATATGATATTAACTT  600

seq1  TCCAACTGAGCTATTATAGGCCTCTGTTCAGTGGAGAGATTAAGGTTATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTGAGCTATTATAGGCCTCTGTTCAGTGGAGAGATTAAGGTTATA  650

seq1  AATTTCCCTGCCATTAGCTTATAAATTTGGTATATGTTGATAATGTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCTGCCATTAGCTTATAAATTTGGTATATGTTGATAATGTTTTG  700

seq1  AGCCCTGG  708
      ||||||||
seq2  AGCCCTGG  708