BAC Information

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BAC

Clone NameB6Ng01-126C08
Chromosome1 (Build37)
Map Location 108,766,396 - 108,945,763
singlet/doubletdoublet
Overlap geneSerpinb5, LOC671141, Serpinb12, Serpinb13, LOC666394, Serpinb3a
Upstream geneEG635504, Zcchc2, EG435634, Phlpp, LOC626075, Bcl2, LOC100042085, Fvt1, Vps4b
Downstream geneSerpinb3d, LOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414, Serpinb11, Serpinb7, Serpinb2, Serpinb10, Serpinb8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126C08.bB6Ng01-126C08.g
ACCDH928593DH928594
length1,144869
definitionDH928593|Mus musculus domesticus DNA, BAC clone: B6Ng01-126C08, 5' end.DH928594|Mus musculus domesticus DNA, BAC clone: B6Ng01-126C08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,766,396 - 108,767,568)(108,944,893 - 108,945,763)
sequence
gaattcattgtatcttttctgaggacaaagttatacacttattattaaat
aaaactaaatattaaatagaatcacacatagatgctacaattattttttg
atataaaaataattattttgtatggcttaaccaaaatagtaattgaaata
tgtgattttaaagtgaactgagtattactggtgctataggttgctctggt
cacttcctgagaaagtgacacatgcctgggctcctgatgctggccatagt
gtgtgagcagagtaagacaccatgtgcctcaaggcatctgcccagatgtt
ttttcatggctgccttgcttttggaattcacccaaagtttcttcttgtct
cctgtccaaaaccattgcttcactgatgtagaattcttactattgttggc
aggatgtagctgggaacacattttgcattagaaattaagttttgtgcttg
gttcttggcccaggatggatgccctgagactggcaaattcagcttttgct
gttgacttgttcaaacaactatgtgaaagggacccagcaggaaacattct
cttctctccaatatgcctctctacttctctgtcccttgcgcaagtgggca
ccaaaggcgacacagcaaatgaaattggacaggtaagctgcccctgcctt
gttttgattttgaatgggaatagttactgcaattcaaagtcagggcctaa
gaggaaaacaagtgtgagtggagttattcaggactgagaactaccatttc
cagggctcttttaatctattctaaatgtgagcactgagttagggggagca
gaacctatatttagaacaggtaccggattgagatggagaacatcggacct
gacagatgtcccattcaccagtggctgtcaacaggtcatatgacatccct
tacctgacatatttgaagctcaattaaaataactattaaatgctcattgc
acatacccttagtaatgggaaagctatccctgcccctgcctatatcgaga
acaaagcactgttctcaacacatttttttatgacatcaaactaatataga
tgaaagcacactgcatctatctagagttatgcagtacactaaatgatcgt
attcatacaagaataggtgaggaaaagactgctgaaatctcatt
gaattcactggattgttcaggagcctagtgacttgtatgtgaagcatggg
ctcaggaactctttcatgagagaatgtaggtcaccagaacttcacatgag
tctttagtaatgaaccagcactgactggatcacagagattatggcatgag
atttacagcaagtgggatgtttctgggttgggcaggctagggaaaatcct
ggagagaactggggaggtagcagataatatagcatttcctccattgaata
cgtgatcaaaggagaattccaatggctgaacttggtgataggaaagcttg
tcagctaatcagctctttcaggacattttgctatgaaatttgcaagtcag
gctttcttttctacctgtcatctgccaggtgctatattactgtaaggttg
ccttcatttcactgtgttttcatattgcctacctattacctgagtgaaaa
atctttgtgtacatagcctaatacttaccatgaggatccacactcagatt
atagtatcatcacaactaatgaaatttgaccgatgtctaacttgttctta
attccttttggttccttcacatcttcaagacatttttggaagacattaag
gaatattatcaagctaacgtggaatcactggatttcgaacatgcagcaga
agagagtgaaaagaagattaattcctgggtagaaagccaaacaaatgggt
actgtgtaaaagggtcatagagaagcacccgaagatgatgggatgttcct
ccataaatacaatgtgagccagaggagggatgaagaatttagcagaaagt
ccatcagtttaaatataaaagagatttgttacacttagattagtactaga
ctctttgagaatcaggagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_108766396_108767568
seq2: B6Ng01-126C08.b_47_1190

seq1  GAATTCATTGTATCTTTTCTGAGGACAAAGTTATACACTTATTATTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTATCTTTTCTGAGGACAAAGTTATACACTTATTATTAAAT  50

seq1  AAAACTAAATATTAAATAGAATCACACATAGATGCTACAATTATTTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTAAATATTAAATAGAATCACACATAGATGCTACAATTATTTTTTG  100

seq1  ATATAAAAATAATTATTTTGTATGGCTTAACCAAAATAGTAATTGAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAAAAATAATTATTTTGTATGGCTTAACCAAAATAGTAATTGAAATA  150

seq1  TGTGATTTTAAAGTGAACTGAGTATTACTGGTGCTATAGGTTGCTCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATTTTAAAGTGAACTGAGTATTACTGGTGCTATAGGTTGCTCTGGT  200

seq1  CACTTCCTGAGAAAGTGACACATGCCTGGGCTCCTGATGCTGGCCATAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCTGAGAAAGTGACACATGCCTGGGCTCCTGATGCTGGCCATAGT  250

seq1  GTGTGAGCAGAGTAAGACACCATGTGCCTCAAGGCATCTGCCCAGATGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAGCAGAGTAAGACACCATGTGCCTCAAGGCATCTGCCCAGATGTT  300

seq1  TTTTCATGGCTGCCTTGCTTTTGGAATTCACCCAAAGTTTCTTCTTGTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGGCTGCCTTGCTTTTGGAATTCACCCAAAGTTTCTTCTTGTCT  350

seq1  CCTGTCCAAAACCATTGCTTCACTGATGTAGAATTCTTACTATTGTTGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCAAAACCATTGCTTCACTGATGTAGAATTCTTACTATTGTTGGC  400

seq1  AGGATGTAGCTGGGAACACATTTTGCATTAGAAATTAAGTTTTGTGCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTAGCTGGGAACACATTTTGCATTAGAAATTAAGTTTTGTGCTTG  450

seq1  GTTCTTGGCCCAGGATGGATGCCCTGAGACTGGCAAATTCAGCTTTTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGGCCCAGGATGGATGCCCTGAGACTGGCAAATTCAGCTTTTGCT  500

seq1  GTTGACTTGTTCAAACAACTATGTGAAAGGGACCCAGCAGGAAACATTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACTTGTTCAAACAACTATGTGAAAGGGACCCAGCAGGAAACATTCT  550

seq1  CTTCTCTCCAATATGCCTCTCTACTTCTCTGTCCCTTGCGCAAGTGGGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCTCCAATATGCCTCTCTACTTCTCTGTCCCTTGCGCAAGTGGGCA  600

seq1  CCAAAGGCGACACAGCAAATGAAATTGGACAGGTAAGCTGCCCCTGCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGCGACACAGCAAATGAAATTGGACAGGTAAGCTGCCCCTGCCTT  650

seq1  GTTTTGATTTTGAATGGGAATAGTTACTGCAATTCAAAGTCAGGGCCTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGATTTTGAATGGGAATAGTTACTGCAATTCAAAGTCAGGGCCTAA  700

seq1  GAGGAAAACAAGTGTGAGTGGAGTTATTCAGGACTGAGAACTACCATTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAAACAAGTGTGAGTGGAGTTATTCAGGACTGAGAACTACCATTTC  750

seq1  CAGGGCTCTTTTAATCTATTCTAAATGTGAGCACTGAGTTAGGGGGAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTCTTTTAATCTATTCTAAATGTGAGCACTGAGTTAGGGGGAGCA  800

seq1  GAACCTATATTTAGAACAGGTACCGGATTGAGATGGAGAACATCGGACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCTATATTTAGAACAGGTACCGGATTGAGATGGAGAACATCGGACCT  850

seq1  GACAGATGTCCCATTCACCAGTGGCTGTCAACAGGTCATATGACATCCCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGATGTCCCATTCACCAGTGGCTGTCAACAGGTCATATGACATCCCT  900

seq1  TACCTGACATATTTGAAGCTCAATTAAAAATAACTTATTAAATGCTCCAT  950
      ||||||||||||||||||||||||| |||||||| ||||||||||| |||
seq2  TACCTGACATATTTGAAGCTCAATT-AAAATAAC-TATTAAATGCT-CAT  947

seq1  TGCACATACCCTTAGTAAATGGGGAAAAGCTATCCCCTGCCCCCTGCCCT  1000
      |||||||||||||||| ||||||  |||||||| ||||| |||||| |||
seq2  TGCACATACCCTTAGT-AATGGG--AAAGCTAT-CCCTG-CCCCTG-CCT  991

seq1  ATATTCAGAGAACAAAAGCACTGTTCCTCAAACACAATTTTTTTATGACA  1050
      ||||   |||||| ||||||||||| ||| ||||| ||||||||||||||
seq2  ATAT--CGAGAAC-AAAGCACTGTT-CTC-AACAC-ATTTTTTTATGACA  1035

seq1  TCAAACATAATATTAAGATGAAAGCACAATTGCATTCTATCCTAGAGTAT  1100
      |||||| ||||||  |||||||||||| | |||| ||||| ||||||| |
seq2  TCAAAC-TAATAT--AGATGAAAGCAC-ACTGCA-TCTAT-CTAGAGT-T  1078

seq1  ATGCAGTAACAACTTAAATGATCCATATTCATACAAGAGTAGGTGAGGAA  1150
      ||||||| |||   |||||||| | ||||||||||||| |||||||||||
seq2  ATGCAGT-ACA--CTAAATGAT-CGTATTCATACAAGAATAGGTGAGGAA  1124

seq1  AAGAAATTGCCTGAGATCTCATT  1173
      |||  | || |||| ||||||||
seq2  AAG--ACTG-CTGAAATCTCATT  1144

seq1: chr1_108944893_108945763
seq2: B6Ng01-126C08.g_69_937 (reverse)

seq1  GCTCCTGATTCTCAAAGAGTCTAGTAACTAATCTATGTGTAAACAAATCT  50
      ||||||||||||||||||||||||| ||||||||| |||| |||||||||
seq2  GCTCCTGATTCTCAAAGAGTCTAGT-ACTAATCTAAGTGT-AACAAATCT  48

seq1  CCTTTTATATTTAAACTGATTGACTTTCTGCTAAATTCTTCATCCTTCCT  100
       ||||||||||||||||||| |||||||||||||||||||||||| ||||
seq2  -CTTTTATATTTAAACTGATGGACTTTCTGCTAAATTCTTCATCCCTCCT  97

seq1  CTTGGCTCACATTGTATTTATGGA-GAACATCCCATCATC-TCTGGTGCT  148
      | |||||||||||||||||||||| ||||||||||||||| || ||||| 
seq2  C-TGGCTCACATTGTATTTATGGAGGAACATCCCATCATCTTCGGGTGC-  145

seq1  TTCTCTATGACCCTTTTACACAGTA-CCATTTGTTTGGCTTTCTACCCAG  197
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCTCTATGACCCTTTTACACAGTACCCATTTGTTTGGCTTTCTACCCAG  195

seq1  GAATTAATCTTCTTTTCACTCTCTTCTGCTGCATGTTCGAAATCCAGTGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAATCTTCTTTTCACTCTCTTCTGCTGCATGTTCGAAATCCAGTGA  245

seq1  TTCCACGTTAGCTTGATAATATTCCTTAATGTCTTCCAAAAATGTCTTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACGTTAGCTTGATAATATTCCTTAATGTCTTCCAAAAATGTCTTGA  295

seq1  AGATGTGAAGGAACCAAAAGGAATTAAGAACAAGTTAGACATCGGTCAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGAAGGAACCAAAAGGAATTAAGAACAAGTTAGACATCGGTCAAA  345

seq1  TTTCATTAGTTGTGATGATACTATAATCTGAGTGTGGATCCTCATGGTAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTAGTTGTGATGATACTATAATCTGAGTGTGGATCCTCATGGTAA  395

seq1  GTATTAGGCTATGTACACAAAGATTTTTCACTCAGGTAATAGGTAGGCAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTAGGCTATGTACACAAAGATTTTTCACTCAGGTAATAGGTAGGCAA  445

seq1  TATGAAAACACAGTGAAATGAAGGCAACCTTACAGTAATATAGCACCTGG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAAACACAGTGAAATGAAGGCAACCTTACAGTAATATAGCACCTGG  495

seq1  CAGATGACAGGTAGAAAAGAAAGCCTGACTTGCAAATTTCATAGCAAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGACAGGTAGAAAAGAAAGCCTGACTTGCAAATTTCATAGCAAAAT  545

seq1  GTCCTGAAAGAGCTGATTAGCTGACAAGCTTTCCTATCACCAAGTTCAGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAAAGAGCTGATTAGCTGACAAGCTTTCCTATCACCAAGTTCAGC  595

seq1  CATTGGAATTCTCCTTTGATCACGTATTCAATGGAGGAAATGCTATATTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAATTCTCCTTTGATCACGTATTCAATGGAGGAAATGCTATATTA  645

seq1  TCTGCTACCTCCCCAGTTCTCTCCAGGATTTTCCCTAGCCTGCCCAACCC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTACCTCCCCAGTTCTCTCCAGGATTTTCCCTAGCCTGCCCAACCC  695

seq1  AGAAACATCCCACTTGCTGTAAATCTCATGCCATAATCTCTGTGATCCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATCCCACTTGCTGTAAATCTCATGCCATAATCTCTGTGATCCAG  745

seq1  TCAGTGCTGGTTCATTACTAAAGACTCATGTGAAGTTCTGGTGACCTACA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTGGTTCATTACTAAAGACTCATGTGAAGTTCTGGTGACCTACA  795

seq1  TTCTCTCATGAAAGAGTTCCTGAGCCCATGCTTCACATACAAGTCACTAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCATGAAAGAGTTCCTGAGCCCATGCTTCACATACAAGTCACTAG  845

seq1  GCTCCTGAACAATCCAGTGAATTC  871
      ||||||||||||||||||||||||
seq2  GCTCCTGAACAATCCAGTGAATTC  869