BAC Information

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BAC

Clone NameB6Ng01-126G17
Chromosome1 (Build37)17 (Build37)
Map Location 111,649,386 - 111,649,88282,092,201 - 82,092,910
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG626474
Downstream geneEG666508, Cdh7, LOC100041429, EG626652
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126G17.bB6Ng01-126G17.g
ACCDH928794DH928795
length1,0161,081
definitionDH928794|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G17, 5' end.DH928795|Mus musculus domesticus DNA, BAC clone: B6Ng01-126G17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(111,649,386 - 111,649,882)(82,092,201 - 82,092,910)
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggcg
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaccatccagtggaagaaagacagcattttcaacaattggtgctggt
aataatcgttttaaaagcccacagatcaagctgccctaagatggtgtgct
tgttcaaatttaacta
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atataaccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccttggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccttatccaggatccaccccataatca
gcatccaaacgatgacaccattgcatacactagcagattttatcgaaagg
acccagatgtagctgtctcttgtgagactatttttcacttcttaattaaa
ggtggctgttctctgtattccgtgtggtcagtgtgcacaagtcttgttta
tttagttatatgttaaatactgagcaatttaaaagatagaagttgaggat
gtgcaagatcctagctgtcactgatcctcaatttttaaactctagttcaa
caagcaaagaatcattaaatccctgttttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_111649386_111649882
seq2: B6Ng01-126G17.b_164_660 (reverse)

seq1  TCTGTACATTGCTTTTGGCAAGATAGCCATTTTTACAATATTGATCCTGC  50
      |||||| |||||||||||||||||||||||||||||||| ||| ||||||
seq2  TCTGTAGATTGCTTTTGGCAAGATAGCCATTTTTACAATGTTGGTCCTGC  50

seq1  CAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCCTTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATT  100

seq1  TCTTTCTTCAGAGATTTGAAGTTTTTATCATACAGATCTTTCACTTCCTT  150
      ||||||||||| || |||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTCAGGGACTTGAAGTTTTTATCATACAGATCTTTCACTTCCTT  150

seq1  AGTTAGAGTCACGCCAAGATATTTTATATTATTTGTGACTATTGAGAAGG  200
       |||||||||||||| ||||||||||||||||||||| ||||||||||||
seq2  CGTTAGAGTCACGCCGAGATATTTTATATTATTTGTGGCTATTGAGAAGG  200

seq1  GTGTTGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTCTGTATAGAGA  250
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GTGTTGTTTCCCTAATTTCTTTCTCAGCCTGTTTATTCTTTGTGTAGAGA  250

seq1  AAGGCCATTGACTTGTTTGAGTTTATTTTATATCCAGCTACTTCACCGAA  300
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAGGCCATTGACTTGTTTGAGTTAATTTTATATCCAGCTACTTCACCGAA  300

seq1  GCTGTTTATCAGGTTTAGGAGTTCTCTGGTAGAATTTTTAGGGTCACTTA  350
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GCTGTTTATCAGGTTTAGGAGTTCTCTGGTGGAATTTTTAGGGTCACTTA  350

seq1  TATATACTATCATATCATCTGCAAAAAGTGATATTTTGACTTCCTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATACTATCATATCATCTGCAAAAAGTGATATTTTGACTTCCTCTTTT  400

seq1  CCAATTTGTATCCCCTTGATCTCCTTTTGTTGTCGAATTGCTCTGGCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTTGTATCCCCTTGATCTCCTTTTGTTGTCGAATTGCTCTGGCTAA  450

seq1  TACTTCAAGTACTATGTTGAAAAGGTAGGGAGAAAGTGGGCAGCCTT  497
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCAAGTACTATGTTGAAAAGGTAGGGAGAAAGTGGGCAGCCTT  497

seq1: chr17_82092201_82092910
seq2: B6Ng01-126G17.g_456_1149

seq1  AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA  50

seq1  CATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA  100

seq1  AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA  150

seq1  ACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTCACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATA  200

seq1  TTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCAAAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACA  250

seq1  CATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAACTCAAGAAAAATGAAGACTGAAGTGTGGACACTATGCCCCTCC  300

seq1  TTAGAAGTGGGAACAAAACACCCTTGGAAGGAGTTACAGAGACAAAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGTGGGAACAAAACACCCTTGGAAGGAGTTACAGAGACAAAGTTT  350

seq1  GGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCTTATCCAGGGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGAGCTGAGATGAAAGGATGGACCATGTAGAGACTGCCTTATCCA-GGAT  399

seq1  CCACCCCATAATCAGCATCCAAACGATGACACCATTGCATACACTAGCAA  450
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CCACCCCATAATCAGCATCCAAACGATGACACCATTGCATACACTAGC-A  448

seq1  GATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTTGTGAGACTATTTTT  498

seq1  CACTTCTTAATTAAAGGTGGCTGTTCTCTGTATTCCGTGTGGTCAGTGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTTAATTAAAGGTGGCTGTTCTCTGTATTCCGTGTGGTCAGTGTG  548

seq1  CACAAGTCTTGTTTATTTAGTAATTAATGTTTAAATACTTGAGCAAATTT  600
      ||||||||||||||||||||| ||  ||| |||||||| |||||||  ||
seq2  CACAAGTCTTGTTTATTTAGTTAT--ATG-TTAAATAC-TGAGCAA--TT  592

seq1  TAACAGATAAGAAGTTGAGGGATTGTGCACAGAATCCTAGCTGTCAACTG  650
      ||| |||| |||||||||||   |||||| || |||||||||||| ||||
seq2  TAAAAGAT-AGAAGTTGAGG--ATGTGCA-AG-ATCCTAGCTGTC-ACTG  636

seq1  ATCGTCAATTTTTTTAGACCTAAGTTCAACAAGCAATG-ATCATTTCAAT  699
      ||| ||||  |||||| ||   |||||||||||||| | |||| || |||
seq2  ATCCTCAA--TTTTTAAACTCTAGTTCAACAAGCAAAGAATCA-TTAAAT  683

seq1  TCCTGTTTTGA  710
       ||||||||||
seq2  CCCTGTTTTGA  694