BAC Information

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BAC

Clone NameB6Ng01-126H22
Chromosome1 (Build37)
Map Location 131,133,184 - 131,134,363
singlet/doubletsinglet
Overlap geneLOC100042732
Upstream geneR3hdm1, Ubxd2, Lct, Mcm6, Dars, LOC620659, Cxcr4
Downstream geneThsd7b, LOC100042745, LOC100042740
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126H22.bB6Ng01-126H22.g
ACCDH928852DH928853
length1,163489
definitionDH928852|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H22, 5' end.DH928853|Mus musculus domesticus DNA, BAC clone: B6Ng01-126H22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaacaatcttcctaaattatgaacaggattatagttacctataat
aaatgaatagatccaaatgtggaatctaacttccttcatttctagtgccc
cttcagggcaatgcttcctttgcagtcagaaagcttcatcttttcttccc
cagactaacactttctgtgtgttagaaatagtattctatttcctgcacat
aggaatcttaattctctaaatcatgaaggctggagaactgggaaactagc
tcagttgataaaatgcttacactgcaggcatgaagacttgagtgtgagtc
ccagaaccaagatttaaaactcagggatgctggcatacacgtttaaatgc
aacactagtgagatggacacagagttaggcacatcttcagtgctcactgg
ccactgagcctagtatacttggtgagtttcagaacttgtttagaaaatag
catacagtgcctttgaaataagactcaagattatcttcttatcctgcatg
catgtgaacacacacacacacacacactggaggggtgggagaaagagaga
cgggggcctagtccaacttagataaaggctccaaaatgaagcctattttt
gattatgcagataaaatatctggagaaactgccatcttattatccaggca
aaaaatcagaacactgtttctttccactggtaggaattatgcaaatagaa
atgattgtaataaacgtggcatgaactctggcagaacttcttagtattac
ctccttcttccagatgtcacgaagactcttccactcattgtcaaattagc
tataggcaatcacacattgctctgtatttcttactgagcagcatattgca
tagctactcttcttgttatgcttgggtctacatgatgactctaccttata
gcctatcaggcctggcttaggaagttaaagctcctaattccaggcaccac
aaaacgttccagctgctctatctttgcacaggggctcatgctgtatcatg
acatactgtggaggacataatggttttacactatgttacagacattgcaa
agtgatctagtagcaaggctcaagaaaagatcagcacctattgcaatgag
acaactcagcagattcaggagataggaatcttgatctttcgtcaggaatt
atttatcctctca

aaaatttactcaaatcagtagccttcctttatacaaacaattaacaggct
gagaaagaagttagggagacaataccttcataatagccgcaaacaatatt
aaatatcttggtgtaactctaacaaagcaagtaaatgatttatatgacaa
gaactacaagtctctgaaaaaagaaattgaagatttcaaaagattgatag
accttgcatgctcatgaattggtaggattaacatatgtaaatagccatct
taccaaaatcaatctacagctatatagattcaatgcactttctatcaaaa
ttccaacagaactgtagaccttgaaagaacaattctcaacttcaaaaatc
tcaggagcgctaaaacaatccagtttaataaaagaacttctagaggtatc
atcatccaagctatacttcagagtaatagtaataaaaactgcatggtatt
ggtgtagacatggacagcttaatcattggaattgaatca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_131133184_131134363
seq2: B6Ng01-126H22.b_50_1212 (reverse)

seq1  TGAGAGGATAAATAATTCCTG--GAAAGGGAAAGATCAGATCTCATCTCC  48
      |||||||||||||||||||||  |||||   |||||    ||  ||||||
seq2  TGAGAGGATAAATAATTCCTGACGAAAGATCAAGAT----TCCTATCTCC  46

seq1  TGGATACTGCTGAGTTGTCTTCATTGCCAATAGTGGCCTGATCTTTTCTT  98
      || || ||||||||||||| |||||| |||||| |  |||||||||||||
seq2  TGAAT-CTGCTGAGTTGTC-TCATTG-CAATAG-GTGCTGATCTTTTCTT  92

seq1  GAGCCTTTTGCTACTAGATCACTTTGGCAATTGTCTGGTAAACATAGTGT  148
      |||||  |||||||||||||||||| |||| ||||||   ||||||||||
seq2  GAGCC--TTGCTACTAGATCACTTT-GCAA-TGTCTG--TAACATAGTGT  136

seq1  AAAACCATTATGTCCTCCAACAGTATGTCATGATACAAGCATGAGCCCCT  198
      |||||||||||||||||| ||||||||||||||||| |||||||||||||
seq2  AAAACCATTATGTCCTCC-ACAGTATGTCATGATAC-AGCATGAGCCCCT  184

seq1  GTGGCAAAGATAGGAGCAGCTGGAACGTTTTGTGGTGCCTTGGAATTAGG  248
      || ||||||||| |||||||||||||||||||||||||| ||||||||||
seq2  GT-GCAAAGATA-GAGCAGCTGGAACGTTTTGTGGTGCC-TGGAATTAGG  231

seq1  AGCTTTAACTTCCTAAGCCAGGCCTGATAGGCTATAAGGTAGAGTCATCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTAACTTCCTAAGCCAGGCCTGATAGGCTATAAGGTAGAGTCATCA  281

seq1  TGTAGACCCAAGCATAACAAGAAGAGTAGCTATGCAATATGCTGCTCAGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACCCAAGCATAACAAGAAGAGTAGCTATGCAATATGCTGCTCAGT  331

seq1  AAGAAATACAGAGCAATGTGTGATTGCCTATAGCTAATTTGACAATGAGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATACAGAGCAATGTGTGATTGCCTATAGCTAATTTGACAATGAGT  381

seq1  GGAAGAGTCTTCCTGACATCTGGAAGAAGGAGGTAATACTAAGAAGTTCT  448
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTCTTCGTGACATCTGGAAGAAGGAGGTAATACTAAGAAGTTCT  431

seq1  GCCAGAGTTCATGCCACGTTTATTACAATCATTTCTATTTGCATAATTCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTTCATGCCACGTTTATTACAATCATTTCTATTTGCATAATTCC  481

seq1  TACCAGTGGAAAGAAACAGTGTTCTGATTTTTTGCCTGGATAATAAGATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGTGGAAAGAAACAGTGTTCTGATTTTTTGCCTGGATAATAAGATG  531

seq1  GCAGTTTCTCCAGATATTTTATCTGCATAATCAAAAATAGGCTTCATTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCTCCAGATATTTTATCTGCATAATCAAAAATAGGCTTCATTTT  581

seq1  GGAGCCTTTATCTAAGTTGGACTAGGCCCCCGTCTCTCTTTCTCCCACCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTTATCTAAGTTGGACTAGGCCCCCGTCTCTCTTTCTCCCACCC  631

seq1  CTCCAGTGTGTGTGTGTGTGTGTGTTCACATGCATGCAGGATAAGAAGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTGTGTGTGTGTGTGTGTGTTCACATGCATGCAGGATAAGAAGAT  681

seq1  AATCTTGAGTCTTATTTCAAAGGCACTGTATGCTATTTTCTAAACAAGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGAGTCTTATTTCAAAGGCACTGTATGCTATTTTCTAAACAAGTT  731

seq1  CTGAAACTCACCAAGTATACTAGGCTCAGTGGCCAGTGAGCACTGAAGAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACTCACCAAGTATACTAGGCTCAGTGGCCAGTGAGCACTGAAGAT  781

seq1  GTGCCTAACTCTGTGTCCATCTCACTAGTGTTGCATTTAAACGTGTATGC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTAACTCTGTGTCCATCTCACTAGTGTTGCATTTAAACGTGTATGC  831

seq1  CAGCATCCCTGAGTTTTAAATCTTGGTTCTGGGACTCACACTCAAGTCTT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATCCCTGAGTTTTAAATCTTGGTTCTGGGACTCACACTCAAGTCTT  881

seq1  CATGCCTGCAGTGTAAGCATTTTATCAACTGAGCTAGTTTCCCAGTTCTC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTGCAGTGTAAGCATTTTATCAACTGAGCTAGTTTCCCAGTTCTC  931

seq1  CAGCCTTCATGATTTAGAGAATTAAGATTCCTATGTGCAGGAAATAGAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTCATGATTTAGAGAATTAAGATTCCTATGTGCAGGAAATAGAAT  981

seq1  ACTATTTCTAACACACAGAAAGTGTTAGTCTGGGGAAGAAAAGATGAAGC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTCTAACACACAGAAAGTGTTAGTCTGGGGAAGAAAAGATGAAGC  1031

seq1  TTTCTGACTGCAAAGGAAGCATTGCCCTGAAGGGGCACTAGAAATGAAGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGACTGCAAAGGAAGCATTGCCCTGAAGGGGCACTAGAAATGAAGG  1081

seq1  AAGTTAGATTCCACATTTGGATCTATTCATTTATTATAGGTAACTATAAT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTAGATTCCACATTTGGATCTATTCATTTATTATAGGTAACTATAAT  1131

seq1  CCTGTTCATAATTTAGGAAGATTGTTGAATTC  1180
      ||||||||||||||||||||||||||||||||
seq2  CCTGTTCATAATTTAGGAAGATTGTTGAATTC  1163


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