BAC Information

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BAC

Clone NameB6Ng01-127J19
Chromosome1 (Build37)
Map Location 151,604,147 - 151,768,825
singlet/doubletdoublet
Overlap genePla2g4a
Upstream geneLOC100042792, LOC435647, LOC100042813
Downstream genePtgs2, LOC676712, LOC100043257, LOC100043261, Pdc, BC003331, Tpr, EG625534, EG545370
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127J19.bB6Ng01-127J19.g
ACCDH929682DH929683
length807238
definitionDH929682|Mus musculus domesticus DNA, BAC clone: B6Ng01-127J19, 5' end.DH929683|Mus musculus domesticus DNA, BAC clone: B6Ng01-127J19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,604,147 - 151,604,953)(151,768,588 - 151,768,825)
sequence
gaattcatattctcttagttatattatgtttctcaaagaacccctgaaaa
ctaagtaaataatttacatttaaattattgttattatgttaatgagtctt
taaacaataccttggtttacctaaagattaaggtcatttaaacattgtag
gataaatattaactcaactttttccaagaaaagtgtaatgttgaggtggg
agacttaatcaattatccttcccttactgaggccttgacatgaactaaga
atatgaagaaactgaaaagtgaaagtaaagcacaaaacttttggttaaaa
gaaaaatatttgagggagtaagcttcaatcttggtgtgattttgacaaca
gaaaagagattttcttgtgtggcaaggcagggttctgagtgttcatttac
acacactagtatatattatatttctatgatcatctagattattaatattc
tttaaaggtgggccaatccaatttgtcacaattaaaacaaatccataaca
aaactacctagttcattatacattgctaccattaattacagtatagaaag
aacaatggtcacagaagggaatgcttgccccataggaagaacaacaatat
gaactaacaagtacccccagagctccctgggactaaaccaccaaccaaag
aaaatacatggtggaaatcatggctctagctgcatatgtagcagaggatg
gtctagttggtcatcaatgggaggagaggcccctagtcctgtgaaggttc
tatgctctagtataagagaatgtcaggggtgggttggtgagcagagggag
ggggaag
ttctgcctctgagtgtttattatgtatgggatagctatagaaactggtgt
aggacacagcctggggatcaggctgcattaacttgttggctgtctccttc
gccatgctcagcagcacttttccttgttcttctgagaagaccaaagctca
agggtgtggagtgcaaagaaaaaaaaaatgtgtaaatatggtgaaggtga
atttgtgtttgagtattgttatagaagggggatgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_151604147_151604953
seq2: B6Ng01-127J19.b_49_855

seq1  GAATTCATATTCTCTTAGTTATATTATGTTTCTCAAAGAACCCCTGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTCTCTTAGTTATATTATGTTTCTCAAAGAACCCCTGAAAA  50

seq1  CTAAGTAAATAATTTACATTTAAATTATTGTTATTATGTTAATGAGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTAAATAATTTACATTTAAATTATTGTTATTATGTTAATGAGTCTT  100

seq1  TAAACAATACCTTGGTTTACCTAAAGATTAAGGTCATTTAAACATTGTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAATACCTTGGTTTACCTAAAGATTAAGGTCATTTAAACATTGTAG  150

seq1  GATAAATATTAACTCAACTTTTTCCAAGAAAAGTGTAATGTTGAGGTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATATTAACTCAACTTTTTCCAAGAAAAGTGTAATGTTGAGGTGGG  200

seq1  AGACTTAATCAATTATCCTTCCCTTACTGAGGCCTTGACATGAACTAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTAATCAATTATCCTTCCCTTACTGAGGCCTTGACATGAACTAAGA  250

seq1  ATATGAAGAAACTGAAAAGTGAAAGTAAAGCACAAAACTTTTGGTTAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGAAACTGAAAAGTGAAAGTAAAGCACAAAACTTTTGGTTAAAA  300

seq1  GAAAAATATTTGAGGGAGTAAGCTTCAATCTTGGTGTGATTTTGACAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATATTTGAGGGAGTAAGCTTCAATCTTGGTGTGATTTTGACAACA  350

seq1  GAAAAGAGATTTTCTTGTGTGGCAAGGCAGGGTTCTGAGTGTTCATTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAGATTTTCTTGTGTGGCAAGGCAGGGTTCTGAGTGTTCATTTAC  400

seq1  ACACACTAGTATATATTATATTTCTATGATCATCTAGATTATTAATATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACTAGTATATATTATATTTCTATGATCATCTAGATTATTAATATTC  450

seq1  TTTAAAGGTGGGCCAATCCAATTTGTCACAATTAAAACAAATCCATAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGTGGGCCAATCCAATTTGTCACAATTAAAACAAATCCATAACA  500

seq1  AAACTACCTAGTTCATTATACATTGCTACCATTAATTACAGTATAGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACCTAGTTCATTATACATTGCTACCATTAATTACAGTATAGAAAG  550

seq1  AACAATGGTCACAGAAGGGAATGCTTGCCCCATAGGAAGAACAACAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATGGTCACAGAAGGGAATGCTTGCCCCATAGGAAGAACAACAATAT  600

seq1  GAACTAACAAGTACCCCCAGAGCTCCCTGGGACTAAACCACCAACCAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAACAAGTACCCCCAGAGCTCCCTGGGACTAAACCACCAACCAAAG  650

seq1  AAAATACATGGTGGAAATCATGGCTCTAGCTGCATATGTAGCAGAGGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACATGGTGGAAATCATGGCTCTAGCTGCATATGTAGCAGAGGATG  700

seq1  GTCTAGTTGGTCATCAATGGGAGGAGAGGCCCCTAGTCCTGTGAAGGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTTGGTCATCAATGGGAGGAGAGGCCCCTAGTCCTGTGAAGGTTC  750

seq1  TATGCTCTAGTATAAGAGAATGTCAGGGGTGGGTTGGTGAGCAGAGGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTCTAGTATAAGAGAATGTCAGGGGTGGGTTGGTGAGCAGAGGGAG  800

seq1  GGGGAAG  807
      |||||||
seq2  GGGGAAG  807

seq1: chr1_151768588_151768825
seq2: B6Ng01-127J19.g_74_311 (reverse)

seq1  CACCCATCCCCCTTCTATAACAATACTCAAACACAAATTCACCTTCACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCATCCCCCTTCTATAACAATACTCAAACACAAATTCACCTTCACCA  50

seq1  TATTTACACATTTTTTTTTTCTTTGCACTCCACACCCTTGAGCTTTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTACACATTTTTTTTTTCTTTGCACTCCACACCCTTGAGCTTTGGTC  100

seq1  TTCTCAGAAGAACAAGGAAAAGTGCTGCTGAGCATGGCGAAGGAGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGAAGAACAAGGAAAAGTGCTGCTGAGCATGGCGAAGGAGACAGC  150

seq1  CAACAAGTTAATGCAGCCTGATCCCCAGGCTGTGTCCTACACCAGTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAAGTTAATGCAGCCTGATCCCCAGGCTGTGTCCTACACCAGTTTCT  200

seq1  ATAGCTATCCCATACATAATAAACACTCAGAGGCAGAA  238
      ||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTATCCCATACATAATAAACACTCAGAGGCAGAA  238