BAC Information

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BAC

Clone NameB6Ng01-127K08
Chromosome1 (Build37)
Map Location 69,121,535 - 69,262,132
singlet/doubletdoublet
Overlap geneErbb4, LOC667842
Upstream genenone
Downstream geneEG241084, Ikzf2, Spag16
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127K08.bB6Ng01-127K08.g
ACCDH929708DH929709
length1,162808
definitionDH929708|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K08, 5' end.DH929709|Mus musculus domesticus DNA, BAC clone: B6Ng01-127K08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,260,957 - 69,262,132)(69,121,535 - 69,122,340)
sequence
gaattcatataaaatatatcattctatttatgttgcctaaatgggacaaa
gtaaaactaatgagagactgttatatcaagagtttatctttaaatttaaa
tgaaaaaaaaaagagagacagagatgaccattatgacattggcatgtaaa
tgaatttacttgaaggaaattagaatacaaaattgtaaccatgtggagat
taaatcagcaggtccagtcacctcagtagctggtcaatcaatttcttata
ccctccatgttgtatatttgtatatgtgtcaaaaaagttagacattaact
caagtatggatgcttccttttttattagagtcccccctccccccccacaa
agtttagtagttgtaggattctggtgtagtgagttttgacacattgttga
atgaccagggaagagagttcagtgagggactgtttaaatcaggttggcct
gtggccatattttttttagggattctcttgattagaccaactgatatgaa
gagacctacctattgtggccagtgccttgccctggtttgggtcttcaact
gtgtaagggtaggcatgtgtgcattcactgttctctcctcttgactggag
gtgtgaccggctgcttcaagctcctctgttgacttctctgcagtgatgaa
cctggaagtgtaagccaaaggaaactttttcttcttaaagattttttttt
tggggtcaggttgtttatcacagcaacagaaaagaaactagagaacttgg
tatttatttttctcattttggtcaaacatcagatatattgggggtggaat
catgggactgtatggaagtaaaataaacttatgaggggtaaatagaaaat
aatattgagtgagaagagaaatcaaggaaaaacaggaatcaggcattttt
agaaactttggagtagaaatgtagtgtttcctccagattaggtgtctcac
atttctgttggctgcttctatcccataaactgtacttaggtgatgtaaat
catttggttatctttctatgacagtgctaaacaaatgtgtttggagtaac
tgctatgctgttttagtttgtagttgtggcaggggcccaactggcttcag
ggagcatgtatatctaaaaggtggtttctcccaacacgggatgtggcaag
ctcacacagcca
gaattccagcccagtgaaactacagcagagtgtaaaggctttagatataa
aaacctttttaaaataaatgatggcttgccattgcacttatttttaaata
tctaaaaccaattgccaaaaggaaagaacctatattcttcttgagttctt
cttttaggattaatttctggagtcaaagacataactaatagggaagtgtc
cctctcaactactatatatatatatgtatgtatatattcataatttgcaa
tagaaatacctgaagatggataatttagaataaccattaggaataaagca
aaaaggagaattttaaacagtctgcagaggaaattcactagagtaattgt
ttttctttaatcctacaggagacagcaaatgatgaaaaagaggcattaag
taaagacacgacaaacagaaaataaatgtaaagcataaatgagtaaagtc
aaccctatcaacaagcatacaatgctctaaactaaaattgtggttgaata
gtgtaaagtaataccaatctcttctgcagttgtccctgcaaaactaaaat
attcatatcagagttttatagaaataaaatctgagcacagagatggttct
tgttctcaatttgattgtgttgagagacactaagatcagtaactcacaca
tgtcagcatgactgtgccaatgcaatgcatgctatgggtgtgacccatta
aggtgtgatgcacacctgtgggagtgtctgtgtgcctgatcctgttaact
tagtgaggtgagaaatgatgatgggatggaatggtctggtgaaggaggag
actttgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_69260957_69262132
seq2: B6Ng01-127K08.b_51_1212 (reverse)

seq1  TGGCTGTGTGAAGCTTGCCACATTCCACTGTTCGTGAAGAAGCACCCTTT  50
      |||||||||| ||||||||||| |||  |||| | ||  || ||||  ||
seq2  TGGCTGTGTG-AGCTTGCCACA-TCCCGTGTT-GGGAGAAACCACC--TT  45

seq1  TTAGACTTATCATGCTCCCTGGAGCAGCTTGGGCCACTGCAACCAACATA  100
      |||||  || ||||||||||| |||   ||||||| |||| | |||| ||
seq2  TTAGATATA-CATGCTCCCTGAAGCCAGTTGGGCCCCTGCCA-CAAC-TA  92

seq1  CCAAACTAAAAACAGCATAGCAGTTACT-CAAACACATTTGTTTAGCACT  149
       |||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  -CAAACT-AAAACAGCATAGCAGTTACTCCAAACACATTTGTTTAGCACT  140

seq1  GTCATAGAAAGATAATCAAATGATTTACATCATCCTAAGTACAGTTTATG  199
      ||||||||||||||| |||||||||||||||| |||||||||||||||||
seq2  GTCATAGAAAGATAACCAAATGATTTACATCA-CCTAAGTACAGTTTATG  189

seq1  GGATAGAAGCAGCCAACAGAAATGTTGAGACACCTAATCCTGGAGGAAAC  249
      |||||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  GGATAGAAGCAGCCAACAGAAATG-TGAGACACCTAAT-CTGGAGGAAAC  237

seq1  ACTACAATTTCTACTCCAAAGTTTCTAAAAATGCCCTGATTCCTGTTTTT  299
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTAC-ATTTCTACTCCAAAGTTTCTAAAAATG-CCTGATTCCTGTTTTT  285

seq1  CCTTGATTTCTCTTCTCACTCAATATTATTTTCTATTTACCCCTCATAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATTTCTCTTCTCACTCAATATTATTTTCTATTTACCCCTCATAAG  335

seq1  TTTATTTTACTTCCATACAGTCCCATGATTCCACCCCCAATATATCTGAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTACTTCCATACAGTCCCATGATTCCACCCCCAATATATCTGAT  385

seq1  GTTTGACCAAAATGAGAAAAATAAATACCAAGTTCTCTAGTTTCTTTTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACCAAAATGAGAAAAATAAATACCAAGTTCTCTAGTTTCTTTTCT  435

seq1  GTTGCTGTGATAAACAACCTGACCCCAAAAAAAAAATCTTTAAGAAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTGTGATAAACAACCTGACCCCAAAAAAAAAATCTTTAAGAAGAAA  485

seq1  AAGTTTCCTTTGGCTTACACTTCCAGGTTCATCACTGCAGAGAAGTCAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCTTTGGCTTACACTTCCAGGTTCATCACTGCAGAGAAGTCAAC  535

seq1  AGAGGAGCTTGAAGCAGCCGGTCACACCTCCAGTCAAGAGGAGAGAACAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGCTTGAAGCAGCCGGTCACACCTCCAGTCAAGAGGAGAGAACAG  585

seq1  TGAATGCACACATGCCTACCCTTACACAGTTGAAGACCCAAACCAGGGCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGCACACATGCCTACCCTTACACAGTTGAAGACCCAAACCAGGGCA  635

seq1  AGGCACTGGCCACAATAGGTAGGTCTCTTCATATCAGTTGGTCTAATCAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCACTGGCCACAATAGGTAGGTCTCTTCATATCAGTTGGTCTAATCAA  685

seq1  GAGAATCCCTAAAAAAAATATGGCCACAGGCCAACCTGATTTAAACAGTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATCCCTAAAAAAAATATGGCCACAGGCCAACCTGATTTAAACAGTC  735

seq1  CCTCACTGAACTCTCTTCCCTGGTCATTCAACAATGTGTCAAAACTCACT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCACTGAACTCTCTTCCCTGGTCATTCAACAATGTGTCAAAACTCACT  785

seq1  ACACCAGAATCCTACAACTACTAAACTTTGTGGGGGGGGAGGGGGGACTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGAATCCTACAACTACTAAACTTTGTGGGGGGGGAGGGGGGACTC  835

seq1  TAATAAAAAAGGAAGCATCCATACTTGAGTTAATGTCTAACTTTTTTGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAAAAAGGAAGCATCCATACTTGAGTTAATGTCTAACTTTTTTGAC  885

seq1  ACATATACAAATATACAACATGGAGGGTATAAGAAATTGATTGACCAGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATACAAATATACAACATGGAGGGTATAAGAAATTGATTGACCAGCT  935

seq1  ACTGAGGTGACTGGACCTGCTGATTTAATCTCCACATGGTTACAATTTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGGTGACTGGACCTGCTGATTTAATCTCCACATGGTTACAATTTTG  985

seq1  TATTCTAATTTCCTTCAAGTAAATTCATTTACATGCCAATGTCATAATGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAATTTCCTTCAAGTAAATTCATTTACATGCCAATGTCATAATGG  1035

seq1  TCATCTCTGTCTCTCTTTTTTTTTTCATTTAAATTTAAAGATAAACTCTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTCTGTCTCTCTTTTTTTTTTCATTTAAATTTAAAGATAAACTCTT  1085

seq1  GATATAACAGTCTCTCATTAGTTTTACTTTGTCCCATTTAGGCAACATAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAACAGTCTCTCATTAGTTTTACTTTGTCCCATTTAGGCAACATAA  1135

seq1  ATAGAATGATATATTTTATATGAATTC  1176
      |||||||||||||||||||||||||||
seq2  ATAGAATGATATATTTTATATGAATTC  1162

seq1: chr1_69121535_69122340
seq2: B6Ng01-127K08.g_67_874

seq1  GAATTCCAGCCCAGTGAAACTACAGCAGAGTGTAAAGGCTTTAGATATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCCAGTGAAACTACAGCAGAGTGTAAAGGCTTTAGATATAA  50

seq1  AAACCTTTTTAAAATAAATGATGGCTTGCCATTGCACTTATTTTTAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTTTAAAATAAATGATGGCTTGCCATTGCACTTATTTTTAAATA  100

seq1  TCTAAAACCAATTGCCAAAAGGAAAGAACCTATATTCTTCTTGAGTTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAACCAATTGCCAAAAGGAAAGAACCTATATTCTTCTTGAGTTCTT  150

seq1  CTTTTAGGATTAATTTCTGGAGTCAAAGACATAACTAATAGGGAAGTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGGATTAATTTCTGGAGTCAAAGACATAACTAATAGGGAAGTGTC  200

seq1  CCTCTCAACTACTATATATATATATGTATGTATATATTCATAATTTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCAACTACTATATATATATATGTATGTATATATTCATAATTTGCAA  250

seq1  TAGAAATACCTGAAGATGGATAATTTAGAATAACCATTAGGAATAAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATACCTGAAGATGGATAATTTAGAATAACCATTAGGAATAAAGCA  300

seq1  AAAAGGAGAATTTTAAACAGTCTGCAGAGGAAATTCACTAGAGTAATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAGAATTTTAAACAGTCTGCAGAGGAAATTCACTAGAGTAATTGT  350

seq1  TTTTCTTTAATCCTACAGGAGACAGCAAATGATGAAAAAGAGGCATTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTAATCCTACAGGAGACAGCAAATGATGAAAAAGAGGCATTAAG  400

seq1  TAAAGACACGACAAACAGAAAATAAATGTAAAGCATAAATGAGTAAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACACGACAAACAGAAAATAAATGTAAAGCATAAATGAGTAAAGTC  450

seq1  AACCCTATCAACAAGCATACAATGCTCTAAACTAAAATTGTGGTTGAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTATCAACAAGCATACAATGCTCTAAACTAAAATTGTGGTTGAATA  500

seq1  GTGTAAAGTAATACCAATCTCTTCTGCAGTTGTCCCTGCAAAACTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAGTAATACCAATCTCTTCTGCAGTTGTCCCTGCAAAACTAAAAT  550

seq1  ATTCATATCAGAGTTTTATAGAAATAAAATCTGAGCACAGAGATGGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATATCAGAGTTTTATAGAAATAAAATCTGAGCACAGAGATGGTTCT  600

seq1  TGTTCTCAATTTGATTGTGTTGAGAGACACTAAGATCAGTAACTCACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTCAATTTGATTGTGTTGAGAGACACTAAGATCAGTAACTCACACA  650

seq1  TGTCAGCATGACTGTGCCAATGCAATGCATGCTATGGGTGTGACCCATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCATGACTGTGCCAATGCAATGCATGCTATGGGTGTGACCCATTA  700

seq1  AGGTGTGATGCACACCTGTGGGAGTGTCTGTGTGCCTGATCCTGTTAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGATGCACACCTGTGGGAGTGTCTGTGTGCCTGATCCTGTTAACT  750

seq1  TAGTGAGGTGAGAAATGATGAT-GGATGGAATGGTCTGGTG-AGGAGGAG  798
      |||||||||||||||||||||| |||||||||||||||||| ||||||||
seq2  TAGTGAGGTGAGAAATGATGATGGGATGGAATGGTCTGGTGAAGGAGGAG  800

seq1  ACTTTGAG  806
      ||||||||
seq2  ACTTTGAG  808