BAC Information

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BAC

Clone NameB6Ng01-127N08
Chromosome1 (Build37)
Map Location 73,127,166 - 73,255,716
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4, Smarcal1, Ankar, Rpl37a, Igfbp2, Igfbp5, LOC672187, LOC100042860, Tnp1, 1700027A15Rik
Downstream genePinc, LOC672208, LOC100043291, Tns1, Rufy4, Il8rb, Il8ra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127N08.bB6Ng01-127N08.g
ACCDH929846DH929847
length1,163158
definitionDH929846|Mus musculus domesticus DNA, BAC clone: B6Ng01-127N08, 5' end.DH929847|Mus musculus domesticus DNA, BAC clone: B6Ng01-127N08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,254,544 - 73,255,716)(73,127,166 - 73,127,324)
sequence
ggaattccaggtgtctcagtagtgcctgtataacttgtcaattgtagacc
aaaaccatcttcatactggggcatcatgtcaaagcaaccttcatgggata
cgcaggtaagctgatcattaatgagacaccaaggagggacgggaagtctg
agggttaacatcatctctcagtggctcttcaagttatgctccatatttct
gcagaggtcaatagcatttgggccaatgctttcctttaagaggtccagcc
ttgagaattcacctcttgttcatgattcagttgatgagatggagaggagg
tcaaaggtcaaaagctttgcccagtgcagctagatttgcccttccgtttg
ctttgtacctgccttgaatatgctcgctgctgcttcctccttggctgtct
attttgttttattgatgactctgagttggctataacattgatcagaggtt
taactgcctaaggaaaaaagaaggggatttagctgtggagcactggagaa
gaagaaataccttgggatgcttcaagttgtaggttctgagtctgtgtctt
ggttttaagaacacgccccaggtaattccaccatttggttgctcccacca
agattctaaattaattaatctagatcacagcttagtcactgggacattta
aaagctctttgcataactctaacattccccagtttgagaacatcacccta
agtaaaggagaattgacatgatgttcataaaattgagatgtctgctatag
acttcagagagatagttcagaggaggcaatccatgaagtgattcccccaa
ccctgcaacacttccagtgatgaatatttttcataggacagcatgatgtt
aatatggattggccacttgatcgcatctacaatcaaataagggaataaac
ctcttgacgtgtgtgagagtaattctagattagatagctgggatcagaaa
aactatcagaatcaggaggaccatttcctgggatgatgtcatgaagtgaa
ttcaagatgggaatcaagtgaacacctactattttctcctctctgctttt
gactgcgaaacaatgtagaaagcggtctcactctaaccactgtggtctcc
cacttgatggacttcatctgcaggccacaaacccctttctttttgagccc
tttgtgggttatt
cctcatcccacagacctttgggactagtcccatgccatagcctgtgtgta
tgcacatcagcttccttgagactctctcaggagttgctgagtagtttcca
gtttttcccaaaagtactgggccagttgtctccaaagtatcaacagctgg
gggaaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_73254544_73255716
seq2: B6Ng01-127N08.b_48_1209 (reverse)

seq1  AATAACCAACAAAAGAGGCTCAAAAAAGAAAGGGGTTGTTTGGCTTGCAG  50
      ||||||| |||||   ||||| ||||||||||||||| | |||| |||||
seq2  AATAACCCACAAA--GGGCTC-AAAAAGAAAGGGGTT-TGTGGCCTGCAG  46

seq1  ATGAAGTCCATCATGGTGGGAAGACACAGTGGTAGGAGTGTGAGACAGCT  100
      |||||||||||||  ||||||   |||||||||   || ||||||| |||
seq2  ATGAAGTCCATCA-AGTGGGAGACCACAGTGGT--TAGAGTGAGACCGCT  93

seq1  TCTTACATTGTATCTGCAGTCACAAAGCAGAGAGGGAGAAATAGTA-GTG  149
      |  |||||||| || ||||||| ||||||||||||   |||||||| |||
seq2  TTCTACATTGTTTC-GCAGTCA-AAAGCAGAGAGGAGAAAATAGTAGGTG  141

seq1  TTCAACTTGATTTCTCATCTTTAATTCAC-TCATGACATCATCCCAGGAA  198
      ||| |||||| ||| |||||| ||||||| ||||||||||||||||||||
seq2  TTC-ACTTGA-TTCCCATCTTGAATTCACTTCATGACATCATCCCAGGAA  189

seq1  ATGGTACTACCTGATCTTGGATGGTTTTTCTGATCCCAGCTAATCTAATC  248
      ||||| || |||||| |  ||| |||||||||||||||||| ||||||||
seq2  ATGGTCCT-CCTGAT-TCTGATAGTTTTTCTGATCCCAGCT-ATCTAATC  236

seq1  TAGAATTTACTCTCACACACGTCAAGAGGTTTA-TCCCCTATTTGATTGT  297
      ||||| ||||||||||||||||||||||||||| |||| |||||||||||
seq2  TAGAA-TTACTCTCACACACGTCAAGAGGTTTATTCCCTTATTTGATTGT  285

seq1  AGATGCGATCAAGTGGCCAATCAATATTAACATCATGCTGTCCTATG-AA  346
      |||||||||||||||||||||| |||||||||||||||||||||||| ||
seq2  AGATGCGATCAAGTGGCCAATCCATATTAACATCATGCTGTCCTATGAAA  335

seq1  AATATTCATCACTGGGAGTGTTGCAGGGTTGGGGGAATCACTTCATGGAT  396
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATATTCATCACTGGAAGTGTTGCAGGGTTGGGGGAATCACTTCATGGAT  385

seq1  TGCCTCCTCTGAACTATCTCTCTGAAGTCTATAGCAGACATCTCAATTTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTCTGAACTATCTCTCTGAAGTCTATAGCAGACATCTCAATTTT  435

seq1  ATGAACATCATGTCAATTCTCCTTTACTTAGGGTGATGTTCTCAAACTGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACATCATGTCAATTCTCCTTTACTTAGGGTGATGTTCTCAAACTGG  485

seq1  GGAATGTTAGAGTTATGCAAAGAGCTTTTAAATGTCCCAGTGACTAAGCT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTTAGAGTTATGCAAAGAGCTTTTAAATGTCCCAGTGACTAAGCT  535

seq1  GTGATCTAGATTAATTAATTTAGAATCTTGGTGGGAGCAACCAAATGGTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTAGATTAATTAATTTAGAATCTTGGTGGGAGCAACCAAATGGTG  585

seq1  GAATTACCTGGGGCGTGTTCTTAAAACCAAGACACAGACTCAGAACCTAC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTACCTGGGGCGTGTTCTTAAAACCAAGACACAGACTCAGAACCTAC  635

seq1  AACTTGAAGCATCCCAAGGTATTTCTTCTTCTCCAGTGCTCCACAGCTAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGAAGCATCCCAAGGTATTTCTTCTTCTCCAGTGCTCCACAGCTAA  685

seq1  ATCCCCTTCTTTTTTCCTTAGGCAGTTAAACCTCTGATCAATGTTATAGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTCTTTTTTCCTTAGGCAGTTAAACCTCTGATCAATGTTATAGC  735

seq1  CAACTCAGAGTCATCAATAAAACAAAATAGACAGCCAAGGAGGAAGCAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCAGAGTCATCAATAAAACAAAATAGACAGCCAAGGAGGAAGCAGC  785

seq1  AGCGAGCATATTCAAGGCAGGTACAAAGCAAACGGAAGGGCAAATCTAGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGAGCATATTCAAGGCAGGTACAAAGCAAACGGAAGGGCAAATCTAGC  835

seq1  TGCACTGGGCAAAGCTTTTGACCTTTGACCTCCTCTCCATCTCATCAACT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGGGCAAAGCTTTTGACCTTTGACCTCCTCTCCATCTCATCAACT  885

seq1  GAATCATGAACAAGAGGTGAATTCTCAAGGCTGGACCTCTTAAAGGAAAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCATGAACAAGAGGTGAATTCTCAAGGCTGGACCTCTTAAAGGAAAG  935

seq1  CATTGGCCCAAATGCTATTGACCTCTGCAGAAATATGGAGCATAACTTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCCCAAATGCTATTGACCTCTGCAGAAATATGGAGCATAACTTGA  985

seq1  AGAGCCACTGAGAGATGATGTTAACCCTCAGACTTCCCGTCCCTCCTTGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCACTGAGAGATGATGTTAACCCTCAGACTTCCCGTCCCTCCTTGG  1035

seq1  TGTCTCATTAATGATCAGCTTACCTGCGTATCCCATGAAGGTTGCTTTGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCATTAATGATCAGCTTACCTGCGTATCCCATGAAGGTTGCTTTGA  1085

seq1  CATGATGCCCCAGTATGAAGATGGTTTTGGTCTACAATTGACAAGTTATA  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGCCCCAGTATGAAGATGGTTTTGGTCTACAATTGACAAGTTATA  1135

seq1  CAGGCACTACTGAGACACCTGGAATTC  1173
      |||||||||||||||||||||||||||
seq2  CAGGCACTACTGAGACACCTGGAATTC  1162

seq1: chr1_73127166_73127324
seq2: B6Ng01-127N08.g_71_228

seq1  CCTCAGCCCACAGACCTTTGGGACTAGTTCCCATGCCATAGCCTGTGTGT  50
      ||||| ||||||||||||||||||||| ||||||||||||||||||||||
seq2  CCTCATCCCACAGACCTTTGGGACTAG-TCCCATGCCATAGCCTGTGTGT  49

seq1  ATGCACATCAGCTTCCTTGAGACTCTCTCAGGAGTTGCTGAGTAGTTTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACATCAGCTTCCTTGAGACTCTCTCAGGAGTTGCTGAGTAGTTTCC  99

seq1  AGTTTTTCCCAAAAGTACTGGGCCAGTTGTCTCCAAAGTATCAACAGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTCCCAAAAGTACTGGGCCAGTTGTCTCCAAAGTATCAACAGCTG  149

seq1  GGGGAAATC  159
      |||||||||
seq2  GGGGAAATC  158