BAC Information

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BAC

Clone NameB6Ng01-127P15
Chromosome1 (Build37)
Map Location 188,223,541 - 188,369,673
singlet/doubletdoublet
Overlap genenone
Upstream geneEprs, 9630028B13Rik, LOC100039138, Slc30a10, 5033404E19Rik, LOC677785, Lyplal1
Downstream geneTgfb2, Rrp15, LOC666832, LOC100042375, D1Pas1, Spata17, Gpatch2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127P15.bB6Ng01-127P15.g
ACCDH929950DH929951
length646570
definitionDH929950|Mus musculus domesticus DNA, BAC clone: B6Ng01-127P15, 5' end.DH929951|Mus musculus domesticus DNA, BAC clone: B6Ng01-127P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(188,223,541 - 188,224,186)(188,369,101 - 188,369,673)
sequence
gaattccttttttctggctttatatctgggctctttaaagttcttctggc
tctctctacttgcatattgctcttgctcaacttctggcccttgtttcctt
tctctgggtcagactggattcaccgggccccttccattaacctcaggttc
atcctctcattgtgtctgtcagcagctgcaggagatgctgattatgctgg
gagcctctggaagaggagatgagacaacgaagcacgggatgataaggaga
ccaacaagagaacaattgctaagacctcagcgcaaagcatagccagagca
gctgctgccgcaaagctctgcagttgctggctttagacgggggaaggatg
aatcagtttagataactcaggaatggacttgaacctttgcccagacctct
gaatgaaccaccatcaaaccctctgcgttttcccaaattaagacattgag
aaaaatattgaatgtgagtttccctttctttcccatccctgcttcctcgg
ggagttgctgggaccacaaagcaattttttaataataatggattagattt
tcagtacatattcccctctggccattttgatgtgtcagaaatgctttaca
aatgttaagtgctgcaattaatctcctgaaagggggtggggggaga
agcattgtaactgcccaaggcatgcactctgcggaaatatattaattcca
cttttcttcatctcttcttttttctcctttcagctccctagattggattt
cataacttagttttctgaatagatgaagaaacacattcctggttgcttga
gtagggtattaccaggcttaatttcctttatctatgaagattattcttac
cgggataattgtagcattcccaacagtaagggttaggattgggtttacag
cccattacacacacacacacacacacacacacacacacacacacacacac
acgtacgcatgcactcacgcatgcatgcctgatgtgcagtttgctcagat
aatgcaagagtaacagtcaatggggagatgaactataactggaaggcata
agcagagatgtaaacagtgataggagtctggggctggagagacgttcaga
gggtaagagcacttgtttgctcctgcagaggacccaggttcagttcccag
cacccacatggcagctcacaagcatctgtaactccagtttcaggggaccc
aattattctcttctgacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_188223541_188224186
seq2: B6Ng01-127P15.b_50_695

seq1  GAATTCCTTTTTTCTGGCTTTATATCTGGGCTCTTTAAAGTTCTTCTGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTTTCTGGCTTTATATCTGGGCTCTTTAAAGTTCTTCTGGC  50

seq1  TCTCTCTACTTGCATATTGCTCTTGCTCAACTTCTGGCCCTTGTTTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTACTTGCATATTGCTCTTGCTCAACTTCTGGCCCTTGTTTCCTT  100

seq1  TCTCTGGGTCAGACTGGATTCACCGGGCCCCTTCCATTAACCTCAGGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGGTCAGACTGGATTCACCGGGCCCCTTCCATTAACCTCAGGTTC  150

seq1  ATCCTCTCATTGTGTCTGTCAGCAGCTGCAGGAGATGCTGATTATGCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTCATTGTGTCTGTCAGCAGCTGCAGGAGATGCTGATTATGCTGG  200

seq1  GAGCCTCTGGAAGAGGAGATGAGACAACGAAGCACGGGATGATAAGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCTGGAAGAGGAGATGAGACAACGAAGCACGGGATGATAAGGAGA  250

seq1  CCAACAAGAGAACAATTGCTAAGACCTCAGCGCAAAGCATAGCCAGAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAGAGAACAATTGCTAAGACCTCAGCGCAAAGCATAGCCAGAGCA  300

seq1  GCTGCTGCCGCAAAGCTCTGCAGTTGCTGGCTTTAGACGGGGGAAGGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTGCCGCAAAGCTCTGCAGTTGCTGGCTTTAGACGGGGGAAGGATG  350

seq1  AATCAGTTTAGATAACTCAGGAATGGACTTGAACCTTTGCCCAGACCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTTTAGATAACTCAGGAATGGACTTGAACCTTTGCCCAGACCTCT  400

seq1  GAATGAACCACCATCAAACCCTCTGCGTTTTCCCAAATTAAGACATTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAACCACCATCAAACCCTCTGCGTTTTCCCAAATTAAGACATTGAG  450

seq1  AAAAATATTGAATGTGAGTTTCCCTTTCTTTCCCATCCCTGCTTCCTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTGAATGTGAGTTTCCCTTTCTTTCCCATCCCTGCTTCCTCGG  500

seq1  GGAGTTGCTGGGACCACAAAGCAATTTTTTAATAATAATGGATTAGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTGCTGGGACCACAAAGCAATTTTTTAATAATAATGGATTAGATTT  550

seq1  TCAGTACATATTCCCCTCTGGCCATTTTGATGTGTCAGAAATGCTTTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTACATATTCCCCTCTGGCCATTTTGATGTGTCAGAAATGCTTTACA  600

seq1  AATGTTAAGTGCTGCAATTAATCTCCTGAAAGGGGGTGGGGGGAGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAAGTGCTGCAATTAATCTCCTGAAAGGGGGTGGGGGGAGA  646

seq1: chr1_188369101_188369673
seq2: B6Ng01-127P15.g_70_645 (reverse)

seq1  AAAGTCAGAAGAGAAT-ATTGGGTCCCCTGGAACTGGAGTTACAGATGCT  49
      |||||||||||||||| ||||||||||||| |||||||||||||||||||
seq2  AAAGTCAGAAGAGAATAATTGGGTCCCCTGAAACTGGAGTTACAGATGCT  50

seq1  TGTGAGCTGCCATGTGGGTGCTGGGAACTGAACCTGGGTCCTCTGCAGGA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCTGCCATGTGGGTGCTGGGAACTGAACCTGGGTCCTCTGCAGGA  100

seq1  GC-AACAAGTGCTCTTACCCTCTGAACGTCTCTCCAGCCCCAGACTCCTA  148
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACAAGTGCTCTTACCCTCTGAACGTCTCTCCAGCCCCAGACTCCTA  150

seq1  TCACTGTTTACATCTCTGCTTATGCCTTCCAGTTCTAGTTCATCTCCCCA  198
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TCACTGTTTACATCTCTGCTTATGCCTTCCAGTTATAGTTCATCTCCCCA  200

seq1  TTGACTGTTACTCTTGCATTATCTGAGCAAACTGCACATCAGGCATGCAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTGTTACTCTTGCATTATCTGAGCAAACTGCACATCAGGCATGCAT  250

seq1  GCGTGAGTGCATGCGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGAGTGCATGCGTACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  300

seq1  GTGTGTGTGTGTGTAATGGGCTGTAAACCCAATCCTAACCCTTACTGTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTAATGGGCTGTAAACCCAATCCTAACCCTTACTGTTG  350

seq1  GGAATGCTACAATTATCCCGGTAAGAATAATCTTCATAGATAAAGGAAAT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCTACAATTATCCCGGTAAGAATAATCTTCATAGATAAAGGAAAT  400

seq1  TAAGCCTGGTAATACCCTACTCAAGCAACCAGGAATGTGTTTCTTCATCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTGGTAATACCCTACTCAAGCAACCAGGAATGTGTTTCTTCATCT  450

seq1  ATTCAGAAAACTAAGTTATGAAATCCAATCTAGGGAGCTGAAAGGAGAAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGAAAACTAAGTTATGAAATCCAATCTAGGGAGCTGAAAGGAGAAA  500

seq1  AAAGAAGAGATGAAGAAAAGTGGAATTAATATATTTCCGCAGAGTGCATG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGAGATGAAGAAAAGTGGAATTAATATATTTCCGCAGAGTGCATG  550

seq1  CCTTGGGCAGTTAC-CTGCTGAATTC  573
      ||||||||||||||  ||||||||||
seq2  CCTTGGGCAGTTACAATGCTGAATTC  576