BAC Information

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BAC

Clone NameB6Ng01-128H14
Chromosome1 (Build37)
Map Location 17,178,817 - 17,179,881
singlet/doubletsinglet
Overlap genenone
Upstream geneEG665282, Stau2, Ube2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306, Jph1, Gdap1
Downstream geneLOC383495, Rbm6-ps1, Ppia-ps1_125.1, Pi15, Crispld1, LOC665564, LOC100040126, Crisp4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128H14.bB6Ng01-128H14.g
ACCDH930315DH930316
length1,1621,055
definitionDH930315|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H14, 5' end.DH930316|Mus musculus domesticus DNA, BAC clone: B6Ng01-128H14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacaccatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagacgccatatccagggatccaccccataatca
gcatccaaacgctgacaccattgcatacactagcaagattttattgaaag
gacccagatgtagctgtctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcatagggctcccaa
tggaggagctagagaaagtagccaagagctaaagggatctgcaaccctat
agtggaacaacatatgactacagtacccggagctcttgactctagctgca
aatgtatcaaagatgctagtcggcatcatggaagaaagccatggacttgc
aactttaatgccagttcagggaactcagggccaaaagggaatggtgtcca
gaggaatgtggg
gaattcttttaaataaacatcaaacaaacaaaagttctcgactatgtgtg
aggtccaaacactttgcgtgcattaagaaccaagtgggggattcctgtca
gaagaagaagaacagtcagaagaacaggtatgcctgtagaactcttccat
ttccttggttcagtcctcatagactcaatcctacccccattgatctttct
tccttccccatccagttgctgtgtcccagcccgtaactccccagcttgag
tggagacaggaccagaggtcatgccagttgccagaactccaggtaagctg
catgcatagggaattccttcactcttttggtagcccctccattaacccta
atcctactcacctcctcataaacataccctagcccccaactcagggtaag
aagtcctgcttgaaaagaggctatgttaaaaaaagaaagaaagaaagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaga
aaggaaagaaaagatgtcatgccacctgccagaagtctagtcttcaactc
aggctgagaacctctgctcaagaacaggtcacacagacccaaggaccaga
gaggaaacaaaacaaaggaacaaaactcccatccaacaaaggcaaaactc
agaaattggcatctagacatataaccacttcatgttcctagaggcctgca
taagaaagcaatcaacaacaaccagagaaatatgttaccgccagagccta
gctatcttactaaagcaaaccctttatattcaacagagctgaagcacaag
aaaatgactttaaaaccaaatttacaaagatgatagaggcccttgagatg
aagcaaatcagtcctttcaagaagagcaggaaaaagacaaaacaaacaaa
caaaaacctgttcagacttgaaatagaaaaagaggaataaagaaaacaga
tggggagaggactctgagggtctaaggagcactctagctgatacctagca
gtcgggatatggatctaagtgaccacttctatagcagcagactcctagag
agata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_17178817_17179881
seq2: B6Ng01-128H14.g_69_1118

seq1  GAATTCTTTTAAATAAACATCAAACAAACAAAAGTTCTCGACTATGTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAATAAACATCAAACAAACAAAAGTTCTCGACTATGTGTG  50

seq1  AGGTCCAAACACTTTGCGTGCATTAAGAACCAAGTGGGGGATTCCTGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCAAACACTTTGCGTGCATTAAGAACCAAGTGGGGGATTCCTGTCA  100

seq1  GAAGAAGAAGAACAGTCAGAAGAACAGGTATGCCTGTAGAACTCTTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAAGAACAGTCAGAAGAACAGGTATGCCTGTAGAACTCTTCCAT  150

seq1  TTCCTTGGTTCAGTCCTCATAGACTCAATCCTACCCCCATTGATCTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTGGTTCAGTCCTCATAGACTCAATCCTACCCCCATTGATCTTTCT  200

seq1  TCCTTCCCCATCCAGTTGCTGTGTCCCAGCCCGTAACTCCCCAGCTTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCCATCCAGTTGCTGTGTCCCAGCCCGTAACTCCCCAGCTTGAG  250

seq1  TGGAGACAGGACCAGAGGTCATGCCAGTTGCCAGAACTCCAGGTAAGCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACAGGACCAGAGGTCATGCCAGTTGCCAGAACTCCAGGTAAGCTG  300

seq1  CATGCATAGGGAATTCCTTCACTCTTTTGGTAGCCCCTCCATTAACCCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCATAGGGAATTCCTTCACTCTTTTGGTAGCCCCTCCATTAACCCTA  350

seq1  ATCCTACTCACCTCCTCATAAACATACCCTAGCCCCCAACTCAGGGTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACTCACCTCCTCATAAACATACCCTAGCCCCCAACTCAGGGTAAG  400

seq1  AAGTCCTGCTTGAAAAGAGGCTATGTTAAAAAAAGAAAGAAAGAAAGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCTGCTTGAAAAGAGGCTATGTTAAAAAAAGAAAGAAAGAAAGAAA  450

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  500

seq1  AAGGAAAGAAAAGATGTCATGCCACCTGCCAGAAGTCTAGTCTTCAACTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGAAAAGATGTCATGCCACCTGCCAGAAGTCTAGTCTTCAACTC  550

seq1  AGGCTGAGAACCTCTGCTCAAGAACAGGTCACACAGACCCAAGGACCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGAGAACCTCTGCTCAAGAACAGGTCACACAGACCCAAGGACCAGA  600

seq1  GAGGAAACAAAACAAAGGAACAAAACTCCCATCCAACAAAGGCAAAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAACAAAACAAAGGAACAAAACTCCCATCCAACAAAGGCAAAACTC  650

seq1  AGAAATTGGCATCTAGACATATAACCACTTCATGTTCCTAGAGGCCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTGGCATCTAGACATATAACCACTTCATGTTCCTAGAGGCCTGCA  700

seq1  TAAGAAAGCAATCAACAACAACCAGAGAAATATGTTACCGCCAGAGCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAAGCAATCAACAACAACCAGAGAAATATGTTACCGCCAGAGCCTA  750

seq1  GCTATCTTACTAAAGCAAACCCTTTATATTCAACAGAGCTGAAGCACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTTACTAAAGCAAACCCTTTATATTCAACAGAGCTGAAGCACAAG  800

seq1  AAAATGACTTTAAAACCAAATTTACAAAGATGATAGAGGCCCTTGAAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AAAATGACTTTAAAACCAAATTTACAAAGATGATAGAGGCCCTTG-AGAT  849

seq1  GAAGCAAATCAGTCCTTTCAAG-AGAGCAGGAAAAAGACAAAACAAAACA  899
      |||||||||||||||||||||| ||||||||||||||||||||| |||||
seq2  GAAGCAAATCAGTCCTTTCAAGAAGAGCAGGAAAAAGACAAAAC-AAACA  898

seq1  AACAAAAAACCTGTTCAAGACTTGAAAATAGAAATAGAGGAAATAAAGAA  949
      ||| |||||||||||| ||||||| ||||||||| ||||| |||||||||
seq2  AAC-AAAAACCTGTTC-AGACTTG-AAATAGAAAAAGAGG-AATAAAGAA  944

seq1  AACAGAATGGGGAGAGGACTCTGAGGGTCTAAGGAGGCAACTCTAGCTGA  999
      ||||| ||||||||||||||||||||||||||||||   |||||||||||
seq2  AACAG-ATGGGGAGAGGACTCTGAGGGTCTAAGGAG--CACTCTAGCTGA  991

seq1  TACCTAGCAGTCGGGGATATGGATCCTAAAGTGACCACTTCCTATAGCCA  1049
      |||||||||||| ||||||||||||   |||||||||||| |||||||  
seq2  TACCTAGCAGTC-GGGATATGGATC--TAAGTGACCACTT-CTATAGC--  1035

seq1  AGCAGGACTCCCAGAG  1065
      |||| |||||| ||||
seq2  AGCA-GACTCCTAGAG  1050