BAC Information

Click to search

BAC

Clone NameB6Ng01-128I09
Chromosome1 (Build37)
Map Location 126,773,228 - 126,931,312
singlet/doubletdoublet
Overlap genenone
Upstream geneDpp10, LOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128I09.bB6Ng01-128I09.g
ACCDH930351DH930352
length591417
definitionDH930351|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I09, 5' end.DH930352|Mus musculus domesticus DNA, BAC clone: B6Ng01-128I09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,930,716 - 126,931,312)(126,773,228 - 126,773,650)
sequence
taccccaactgcacctgtctttagaggtgtagaatatgcatatgtatata
tatatgtgtgttttgtgtttgtatgtatgtatgtatctatgcatgtatat
acatatgtataatgtagaagattaagtggaagagaaactccgaatatgaa
ggtgagggcaagtcatcacttatgctggaggagagttattggtggtaagc
tgcttggagttcactgaaccgtagccttataagttacccctcatttatgc
tctaagtcagcccaattaattctttttctttttttttttctcaagttaga
ttttggtgtagttatattttagcttgcggctgggggtggatggaggaggt
cgtgttaatcttcttcgggaaaagtttcacacagcagaagccagcctagg
cagggcaagaaatggatgtcaactttatctctaggtgacttactgcagag
aagagagagtgagtgagagagagagagagagagagagagagagacagaga
gagagacagagagagacagagagagagggagaaacagagagagagtgaaa
gagagaaagagagggggagagacacagagagggagaaacag
agaactgcagatttcaaataaccattgaatatgactccagataatggggc
tgacataagtgcatggatcttgaagtagtgcctttaatttttctaaacag
aatatatttttacagcattgtaatagaacaaagtacattatgctcaacca
ctagaattccaagaatctgtcagactggaaaagaaatcttccaatagggc
agagggctaagaaatattctccaatgtaattgacattatctacttttgac
ttcaggattcttggaaataccattttcctacatgtctggtaaagaagttc
agaatgcaaaatcatgttcctctctttcccctccaccacactcaccatgc
atcattttgtcttgatagtttaatctttgtgtgtgtgtgagagagagaag
tttgggctgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126930716_126931312
seq2: B6Ng01-128I09.b_48_644 (reverse)

seq1  CTGTTTCTCCCTCTCTGTGTCTCTCCCCCTCTCTTTCTCTCTTTCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTGTTTCTCCCTCTCTGTGTCTCTCCCCCTCTCTTTCTCTCTTTCACTCT  50

seq1  CTCTCTGTTTCTCCCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGTTTCTCCCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTGTCT  100

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACTCTCTCTTCTCTGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACTCTCTCTTCTCTGCAGT  150

seq1  AAGTCACCTAGAGATAAAGTTGACATCCATTTCTTGCCCTGCCTAGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACCTAGAGATAAAGTTGACATCCATTTCTTGCCCTGCCTAGGCTG  200

seq1  GCTTCTGCTGTGTGAAACTTTTCCCGAAGAAGATTAACACGACCTCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTGCTGTGTGAAACTTTTCCCGAAGAAGATTAACACGACCTCCTCC  250

seq1  ATCCACCCCCAGCCGCAAGCTAAAATATAACTACACCAAAATCTAACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCCCCAGCCGCAAGCTAAAATATAACTACACCAAAATCTAACTTG  300

seq1  AGAAAAAAAAAAAGAAAAAGAATTAATTGGGCTGACTTAGAGCATAAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAAAAAAAGAAAAAGAATTAATTGGGCTGACTTAGAGCATAAATG  350

seq1  AGGGGTAACTTATAAGGCTACGGTTCAGTGAACTCCAAGCAGCTTACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTAACTTATAAGGCTACGGTTCAGTGAACTCCAAGCAGCTTACCAC  400

seq1  CAATAACTCTCCTCCAGCATAAGTGATGACTTGCCCTCACCTTCATATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACTCTCCTCCAGCATAAGTGATGACTTGCCCTCACCTTCATATTC  450

seq1  GGAGTTTCTCTTCCACTTAATCTTCTACATTATACATATGTATATACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTCTCTTCCACTTAATCTTCTACATTATACATATGTATATACATG  500

seq1  CATAGATACATACATACATACAAACACAAAACACACATATATATATACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATACATACATACATACAAACACAAAACACACATATATATATACAT  550

seq1  ATGCATATTCTACACCTCTAAAGACAGGTGCAGTTGGGGTAGAATTC  597
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATATTCTACACCTCTAAAGACAGGTGCAGTTGGGGTAGAATTC  597

seq1: chr1_126773228_126773650
seq2: B6Ng01-128I09.g_68_490

seq1  GAATTCAGAACTGCAGATTTCAAATAACCATTGAATATGACTCCAGATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAACTGCAGATTTCAAATAACCATTGAATATGACTCCAGATAA  50

seq1  TGGGGCTGACATAAGTGCATGGATCTTGAAGTAGTGCCTTTAATTTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCTGACATAAGTGCATGGATCTTGAAGTAGTGCCTTTAATTTTTCT  100

seq1  AAACAGAATATATTTTTACAGCATTGTAATAGAACAAAGTACATTATGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAATATATTTTTACAGCATTGTAATAGAACAAAGTACATTATGCT  150

seq1  CAACCACTAGAATTCCAAGAATCTGTCAGACTGGAAAAGAAATCTTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACTAGAATTCCAAGAATCTGTCAGACTGGAAAAGAAATCTTCCAA  200

seq1  TAGGGCAGAGGGCTAAGAAATATTCTCCAATGTAATTGACATTATCTACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGCAGAGGGCTAAGAAATATTCTCCAATGTAATTGACATTATCTACT  250

seq1  TTTGACTTCAGGATTCTTGGAAATACCATTTTCCTACATGTCTGGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTTCAGGATTCTTGGAAATACCATTTTCCTACATGTCTGGTAAAG  300

seq1  AAGTTCAGAATGCAAAATCATGTTCCTCTCTTTCCCCTCCACCACACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAGAATGCAAAATCATGTTCCTCTCTTTCCCCTCCACCACACTCA  350

seq1  CCATGCATCATTTTGTCTTGATAGTTTAATCTTTGTGTGTGTGTGAGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCATCATTTTGTCTTGATAGTTTAATCTTTGTGTGTGTGTGAGAGA  400

seq1  GAGAAGTTTGGGCTGTGTGTGTG  423
      |||||||||||||||||||||||
seq2  GAGAAGTTTGGGCTGTGTGTGTG  423