BAC Information

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BAC

Clone NameB6Ng01-128O13
Chromosome1 (Build37)
Map Location 162,216,837 - 162,217,969
singlet/doubletsinglet
Overlap geneRabgap1l
Upstream geneRfwd2, EG620484, Tnr, 4930523C07Rik, 4930562F07Rik, Tnn, Mrps14, Cacybp
Downstream geneGpr52, EG620750, Rc3h1, Serpinc1, Zbtb37, Gas5, Dars2, Cenpl, Klhl20, Ankrd45, 4930469G21Rik, EG665117, EG640200, EG620839, Prdx6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128O13.b
ACCDH930635
length1,124
definitionDH930635|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O13, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagtgggagttcagcttatataggatgacacaagtgtcttgga
tacatctttgaatgactttttccagggctgtggatgtaaggtgatctgtc
tgtatatattgcctggtaccttttgtgagaaattagagagccagttggca
tggaaaatagtaaaatccacagaacagaacacaatcagctgtctcatttg
gatacagagcatatggtgtatctcattaacgcctgcctgcctgcctgcca
cacaaaatgtgtctgaccaatctttcgtggctttgattttatctaaacaa
cgagttcacaaaagcagaaatgctcccctaacttagtttatgctttgcac
atttcaggggtgaaaaaaaaaaacccaaatcttattattgcttaaaacag
gctgcagagaataggggctactgtgaatagcagtaccctaaacagaccaa
tgagctcacttgagccttgtcagcacatcacagaagctcctggggggaaa
cgagtatctggaatgaaatcagtcttggtctgggaagagttgaagaacca
cggtcttcagtcatctttatctccattctacattatcaagataagcacag
cgcatacctgggagcataaagcatttcacagagctcagtggtgtgtctct
atgtgcagcagcttagcagaatcagagaaagggaggaggctttggtttta
atagcaataaatgatgactcaatcccctcatatgattattgttttcaatc
cctatgctgctgagtgggtaatacacacataaagcccaggctgctgctgc
gagcatgcgctcaggtctcatatggttcagaaaaagatctcaatattctt
agttactgaaggaagacaaatctttgtataaaatttccttttatgtggga
tacttagaaagaaaaatttaaaggaacaaacaataaattagaggttctcg
gtcttgggggagtactaaggggatgtttacagcacagagactgttttggg
agttttgaaaatgtttaatgatacgcgtataacattgtgatacgtgaaac
tacatgatacctactacactgattaggcaccttacatgaaatattattca
cctgaggtgtaaattagacagtta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_162216837_162217969
seq2: B6Ng01-128O13.b_46_1169

seq1  GAATTCTAAGTGGGAGTTCAGCTTATATAGGATGACACAAGTGTCTTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAAGTGGGAGTTCAGCTTATATAGGATGACACAAGTGTCTTGGA  50

seq1  TACATCTTTGAATGACTTTTTCCAGGGCTGTGGATGTAAGGTGATCTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTTTGAATGACTTTTTCCAGGGCTGTGGATGTAAGGTGATCTGTC  100

seq1  TGTATATATTGCCTGGTACCTTTTGTGAGAAATTAGAGAGCCAGTTGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATTGCCTGGTACCTTTTGTGAGAAATTAGAGAGCCAGTTGGCA  150

seq1  TGGAAAATAGTAAAATCCACAGAACAGAACACAATCAGCTGTCTCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATAGTAAAATCCACAGAACAGAACACAATCAGCTGTCTCATTTG  200

seq1  GATACAGAGCATATGGTGTATCTCATTAACGCCTGCCTGCCTGCCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAGAGCATATGGTGTATCTCATTAACGCCTGCCTGCCTGCCTGCCA  250

seq1  CACAAAATGTGTCTGACCAATCTTTCGTGGCTTTGATTTTATCTAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATGTGTCTGACCAATCTTTCGTGGCTTTGATTTTATCTAAACAA  300

seq1  CGAGTTCACAAAAGCAGAAATGCTCCCCTAACTTAGTTTATGCTTTGCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTCACAAAAGCAGAAATGCTCCCCTAACTTAGTTTATGCTTTGCAC  350

seq1  ATTTCAGGGGTGAAAAAAAAAAACCCAAATCTTATTATTGCTTAAAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGGGGTGAAAAAAAAAAACCCAAATCTTATTATTGCTTAAAACAG  400

seq1  GCTGCAGAGAATAGGGGCTACTGTGAATAGCAGTACCCTAAACAGACCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAGAGAATAGGGGCTACTGTGAATAGCAGTACCCTAAACAGACCAA  450

seq1  TGAGCTCACTTGAGCCTTGTCAGCACATCACAGAAGCTCCTGGGGGGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCACTTGAGCCTTGTCAGCACATCACAGAAGCTCCTGGGGGGAAA  500

seq1  CGAGTATCTGGAATGAAATCAGTCTTGGTCTGGGAAGAGTTGAAGAACCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTATCTGGAATGAAATCAGTCTTGGTCTGGGAAGAGTTGAAGAACCA  550

seq1  CGGTCTTCAGTCATCTTTATCTCCATTCTACATTATCAAGATAAGCACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCTTCAGTCATCTTTATCTCCATTCTACATTATCAAGATAAGCACAG  600

seq1  CGCATACCTGGGAGCATAAAGCATTTCACAGAGCTCAGTGGTGTGTCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCATACCTGGGAGCATAAAGCATTTCACAGAGCTCAGTGGTGTGTCTCT  650

seq1  ATGTGCAGCAGCTTAGCAGAATCAGAGAAAGGGAGGAGGCTTTGGTTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCAGCAGCTTAGCAGAATCAGAGAAAGGGAGGAGGCTTTGGTTTTA  700

seq1  ATAGCAATAAATGATGACTCAATCCCCTCATATGATTATTGTTTTCAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATAAATGATGACTCAATCCCCTCATATGATTATTGTTTTCAATC  750

seq1  CCTATGCTGCTGAGTGGGTAATACACACATAAAGCCCAGGCTGCTGCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATGCTGCTGAGTGGGTAATACACACATAAAGCCCAGGCTGCTGCTGC  800

seq1  GAGCATGCGCTCAGGTCTCATATGGTTCAGAAAAAGATCTCAATATTCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGCGCTCAGGTCTCATATGGTTCAGAAAAAGATCTCAATATTCTT  850

seq1  AGTTACTGAAGGAAGACAAATCTTTGTATAAAATT--CCTTTATGTGGAA  898
      |||||||||||||||||||||||||||||||||||  | ||||||||| |
seq2  AGTTACTGAAGGAAGACAAATCTTTGTATAAAATTTCCTTTTATGTGGGA  900

seq1  TACTTAGAAAAGAAAAATTTAAAGGAACAAACAATAAATTAGAGGTTCTC  948
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAG-AAAGAAAAATTTAAAGGAACAAACAATAAATTAGAGGTTCTC  949

seq1  GGTCTT-GGGGAGTACTAAGGGGATGTTTAACAAGCACAGAGACTGTTTT  997
      |||||| |||||||||||||||||||||||   |||||||||||||||||
seq2  GGTCTTGGGGGAGTACTAAGGGGATGTTTA--CAGCACAGAGACTGTTTT  997

seq1  GGGAGTTTTGAAAAATGTTTAATGATACGCGTATAACATTGTGAATACGT  1047
      |||||||||| |||||||||||||||||||||||||||||||| ||||||
seq2  GGGAGTTTTG-AAAATGTTTAATGATACGCGTATAACATTGTG-ATACGT  1045

seq1  GAAACTAACATGATACCTACTACACTGATAAGGCACCTAACATGAAAATA  1097
      |||||| |||||||||||||||||||||| |||||||| ||||| |||||
seq2  GAAACT-ACATGATACCTACTACACTGATTAGGCACCTTACATG-AAATA  1093

seq1  ATTAATACCACTGAGGTGTAAAAATTAAGACAGTTA  1133
        | || |  ||||||||||||   | |||||||||
seq2  --TTATTCACCTGAGGTGTAAA---TTAGACAGTTA  1124