BAC Information

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BAC

Clone NameB6Ng01-128P03
Chromosome1 (Build37)
Map Location 46,058,360 - 46,189,965
singlet/doubletdoublet
Overlap geneLOC100042453, EG212225, Dnahc7b
Upstream geneLOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054
Downstream geneLOC666855, Slc39a10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128P03.bB6Ng01-128P03.g
ACCDH930660DH930661
length1,1831,069
definitionDH930660|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P03, 5' end.DH930661|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,188,767 - 46,189,965)(46,058,360 - 46,059,437)
sequence
gaattcagaataagtctacaatgtgtggctataagacaaaaatacacgac
caatcatgtccctatgcataagcaatggattgatttacaaactataatct
tcacaagtaataagtaataaatgtctagtcaaactatgtatttttgaatt
tagctaatcagtttcctatagagcccagagactgggtttacgtttctccc
tatctataataaatgagtgatttttgtagtgactacattgaccatctgct
tcacctttattggaataaactttaaaacacagagatattttaagcaacaa
acaataaatcttatttgctaattttgttaaagattattatattcaataga
aactcagtttgaataaccccaaattgtttaagccagtaacatccaggaaa
ataagcagatggtaatgtgtacaactcctctttccacatgagttcttttc
taacaaagaggaaggcacagcaattatttatacctattaccagccacaga
actacttgatggccaataagagttaaaatataaatatgcttcttgaagtc
tgtatgagtatgtaaaattgatcacacactcagaactccagcccaaacac
aggcaacttcaaagaaaagaaagactttaactaaagcaagactctctaag
taaaattaaaaataaatgtaaaattagtttcagtaattttaataaatttt
gtataagcaataatttgaagaaaatgtacatgtaaacatttaaattcatt
tttatcattttcatacatacagaattttgaatgagcttacatgtttacag
gttcagttaaatatcttaaatgtcttaaatatcttaaactaaatgtaaag
ggttttttctaatttagatttgaggaattctatttttaaaaaatctcata
tcccataaaagatactgttataggaacaaaggagcataaaatgaaactgc
tattagttattttatattactttgtctgctttagatagagttaaaaaata
atagaagtactagaaaaatacccaatgtgaaaatggagggtttgatgagg
aacatttcagcactgtcatagaaggtgtaggtgcatacacagtctttttc
agaaccagagaaagcactgctcagactggaatatctggttgatttaaagt
gggagtatgtacactctcagtacctgactgttc
gaattccctcatggcctacagggggaaagttcaatcaaggagtgatgagg
taaacctgcaaaatcagcacttgagaggcagcaacaggagaattgctcca
agtatgaggctagagctgtctgtgtagggcataccaggtcagtcagagct
acatagaaagactttagctttggcaaaagaatagatgtggagaaagaaaa
ctttattaagctttattaagattaacatatagccaaggtggcacttctct
ttaatcccaacactcaggaggaggcagatctctgtgagttgaagtccagc
tggttctacaaagtgagtccaggacagcgagagctctgttgcacaaagaa
accctgtctggggaacagggctgggtagattaacatataaaggaaaccag
ttgacagaaaatgtctggaagccctttctcacctgggcttcatacattaa
acagaacgtagtcaagaaaagctcactgcttttctggtagagatgctact
gtataaataccctaacgcttatgaggctcctaaaccaggacttctttatc
tgtacccttagcttgctagtttactcccatgttgggaatgtttttccatt
ttaataatctattttggtctctatttcttacctcctggtcctggcccaat
tcatcactctaggacactagaaccggggtattttaagagctgtccctggg
attctttggtgggtgtccttggattcagagatcctatagatctctgtcta
taatgtttcaaacccctacagcagctaggtctcatccactgtcccagtca
ctttccagtcaaacttaactcccctactctaatctgcatacatgctatct
gccttaaatgccatgcctctgaccatgtacagaggcttctaatcttgtac
agaggttgcttccgattttatctcctgtgtctggtaaattctacattatc
tctgaaagctttctttgacatccttaggagctgttatctgtatttccatg
ctttcatttctgttataataagttattgtactgcagcattactgttgctg
tggtttccagttgagggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_46188767_46189965
seq2: B6Ng01-128P03.b_47_1229 (reverse)

seq1  GAACAGGTCAGGGTACCTGAGA-TGTACATTTACTCCCCATTTTAATCAA  49
      ||||| |||| |||| |||||| ||||||  |||||||  ||| ||||||
seq2  GAACA-GTCA-GGTA-CTGAGAGTGTACA--TACTCCCACTTTAAATCAA  45

seq1  -CAGATATT-CAGTCCTTGAGCAGTGCTTTCTTCTGTGTCTGAAAAAGAC  97
       |||||||| |||||  |||||||||||||| ||||  ||||||||||||
seq2  CCAGATATTCCAGTC--TGAGCAGTGCTTTC-TCTGGTTCTGAAAAAGAC  92

seq1  TGTGTTATGCACTAACACCTTCTATGACAGTTGGCTGAAATGTTTCCCTC  147
      |||| |||||||  |||||||||||||||||  |||||||||||  ||||
seq2  TGTG-TATGCACCTACACCTTCTATGACAGT--GCTGAAATGTT--CCTC  137

seq1  ATCAAACCCTTCCATTTTCACATTGGTTATTTTTCTAGTTACTTCTATTA  197
      ||||||||| |||||||||||||||| ||||||||||| |||||||||||
seq2  ATCAAACCC-TCCATTTTCACATTGGGTATTTTTCTAG-TACTTCTATTA  185

seq1  TTTTTTTAACTCTATCTAAAAGCAGACAAAGTAATATAAAATAACTAATA  247
       |||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  -TTTTTTAACTCTATCT-AAAGCAGACAAAGTAATATAAAATAACTAATA  233

seq1  GCAGTTTCATTTTATGCTCCTTTTGTTCCTATAACAGTATCTTTTATGGG  297
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCAGTTTCATTTTATGCTCC-TTTGTTCCTATAACAGTATCTTTTATGGG  282

seq1  ATATGAGATTTTTTTAAAAATAGAATTCCTCAAATCTAAATTAGAAAAAA  347
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGA-TTTTTTAAAAATAGAATTCCTCAAATCTAAATTAGAAAAAA  331

seq1  CCCTTTACATTTAGTTTAAGATATTTAAGACATTTAAGATATTTAACTGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTACATTTAGTTTAAGATATTTAAGACATTTAAGATATTTAACTGA  381

seq1  ACCTGTAAACATGTAAGCTCATTCAAAATTCTGTATGTATGAAAATGATA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTAAACATGTAAGCTCATTCAAAATTCTGTATGTATGAAAATGATA  431

seq1  AAAATGAATTTAAATGTTTACATGTACATTTTCTTCAAATTATTGCTTAT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATTTAAATGTTTACATGTACATTTTCTTCAAATTATTGCTTAT  481

seq1  ACAAAATTTATTAAAATTACTGAAACTAATTTTACATTTATTTTTAATTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTTATTAAAATTACTGAAACTAATTTTACATTTATTTTTAATTT  531

seq1  TACTTAGAGAGTCTTGCTTTAGTTAAAGTCTTTCTTTTCTTTGAAGTTGC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGAGAGTCTTGCTTTAGTTAAAGTCTTTCTTTTCTTTGAAGTTGC  581

seq1  CTGTGTTTGGGCTGGAGTTCTGAGTGTGTGATCAATTTTACATACTCATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTTTGGGCTGGAGTTCTGAGTGTGTGATCAATTTTACATACTCATA  631

seq1  CAGACTTCAAGAAGCATATTTATATTTTAACTCTTATTGGCCATCAAGTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTTCAAGAAGCATATTTATATTTTAACTCTTATTGGCCATCAAGTA  681

seq1  GTTCTGTGGCTGGTAATAGGTATAAATAATTGCTGTGCCTTCCTCTTTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGTGGCTGGTAATAGGTATAAATAATTGCTGTGCCTTCCTCTTTGT  731

seq1  TAGAAAAGAACTCATGTGGAAAGAGGAGTTGTACACATTACCATCTGCTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAAGAACTCATGTGGAAAGAGGAGTTGTACACATTACCATCTGCTT  781

seq1  ATTTTCCTGGATGTTACTGGCTTAAACAATTTGGGGTTATTCAAACTGAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCCTGGATGTTACTGGCTTAAACAATTTGGGGTTATTCAAACTGAG  831

seq1  TTTCTATTGAATATAATAATCTTTAACAAAATTAGCAAATAAGATTTATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATTGAATATAATAATCTTTAACAAAATTAGCAAATAAGATTTATT  881

seq1  GTTTGTTGCTTAAAATATCTCTGTGTTTTAAAGTTTATTCCAATAAAGGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTGCTTAAAATATCTCTGTGTTTTAAAGTTTATTCCAATAAAGGT  931

seq1  GAAGCAGATGGTCAATGTAGTCACTACAAAAATCACTCATTTATTATAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCAGATGGTCAATGTAGTCACTACAAAAATCACTCATTTATTATAGA  981

seq1  TAGGGAGAAACGTAAACCCAGTCTCTGGGCTCTATAGGAAACTGATTAGC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGAGAAACGTAAACCCAGTCTCTGGGCTCTATAGGAAACTGATTAGC  1031

seq1  TAAATTCAAAAATACATAGTTTGACTAGACATTTATTACTTATTACTTGT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTCAAAAATACATAGTTTGACTAGACATTTATTACTTATTACTTGT  1081

seq1  GAAGATTATAGTTTGTAAATCAATCCATTGCTTATGCATAGGGACATGAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTATAGTTTGTAAATCAATCCATTGCTTATGCATAGGGACATGAT  1131

seq1  TGGTCGTGTATTTTTGTCTTATAGCCACACATTGTAGACTTATTCTGAAT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGTGTATTTTTGTCTTATAGCCACACATTGTAGACTTATTCTGAAT  1181

seq1  TC  1199
      ||
seq2  TC  1183

seq1: chr1_46058360_46059437
seq2: B6Ng01-128P03.g_66_1134

seq1  GAATTCCCTCATGGCCTACAGGGGGAAAGTTCAATCAAGGAGTGATGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTCATGGCCTACAGGGGGAAAGTTCAATCAAGGAGTGATGAGG  50

seq1  TAAACCTGCAAAATCAGCACTTGAGAGGCAGCAACAGGAGAATTGCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCTGCAAAATCAGCACTTGAGAGGCAGCAACAGGAGAATTGCTCCA  100

seq1  AGTATGAGGCTAGAGCTGTCTGTGTAGGGCATACCAGGTCAGTCAGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGGCTAGAGCTGTCTGTGTAGGGCATACCAGGTCAGTCAGAGCT  150

seq1  ACATAGAAAGACTTTAGCTTTGGCAAAAGAATAGATGTGGAGAAAGAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGAAAGACTTTAGCTTTGGCAAAAGAATAGATGTGGAGAAAGAAAA  200

seq1  CTTTATTAAGCTTTATTAAGATTAACATATAGCCAAGGTGGCACTTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTAAGCTTTATTAAGATTAACATATAGCCAAGGTGGCACTTCTCT  250

seq1  TTAATCCCAACACTCAGGAGGAGGCAGATCTCTGTGAGTTGAAGTCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCCCAACACTCAGGAGGAGGCAGATCTCTGTGAGTTGAAGTCCAGC  300

seq1  TGGTTCTACAAAGTGAGTCCAGGACAGCGAGAGCTCTGTTGCACAAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTACAAAGTGAGTCCAGGACAGCGAGAGCTCTGTTGCACAAAGAA  350

seq1  ACCCTGTCTGGGGAACAGGGCTGGGTAGATTAACATATAAAGGAAACCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTCTGGGGAACAGGGCTGGGTAGATTAACATATAAAGGAAACCAG  400

seq1  TTGACAGAAAATGTCTGGAAGCCCTTTCTCACCTGGGCTTCATACATTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGAAAATGTCTGGAAGCCCTTTCTCACCTGGGCTTCATACATTAA  450

seq1  ACAGAACGTAGTCAAGAAAAGCTCACTGCTTTTCTGGTAGAGATGCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAACGTAGTCAAGAAAAGCTCACTGCTTTTCTGGTAGAGATGCTACT  500

seq1  GTATAAATACCCTAACGCTTATGAGGCTCCTAAACCAGGACTTCTTTATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAATACCCTAACGCTTATGAGGCTCCTAAACCAGGACTTCTTTATC  550

seq1  TGTACCCTTAGCTTGCTAGTTTACTCCCATGTTGGGAATGTTTTTCCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCCTTAGCTTGCTAGTTTACTCCCATGTTGGGAATGTTTTTCCATT  600

seq1  TTAATAATCTATTTTGGTCTCTATTTCTTACCTCCTGGTCCTGGCCCAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATCTATTTTGGTCTCTATTTCTTACCTCCTGGTCCTGGCCCAAT  650

seq1  TCATCACTCTAGGACACTAGAACCGGGGTATTTTAAGAGCTGTCCCTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACTCTAGGACACTAGAACCGGGGTATTTTAAGAGCTGTCCCTGGG  700

seq1  ATTCTTTGGTGGGTGTCCTTGGATTCAGAGATCCTATAGATCTCTGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGGTGGGTGTCCTTGGATTCAGAGATCCTATAGATCTCTGTCTA  750

seq1  TAATGTTTCAAACCCCTACAGCAGCTAGGTCTCATCCACTGTCCCAGTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTTTCAAACCCCTACAGCAGCTAGGTCTCATCCACTGTCCCAGTCA  800

seq1  CTTTCCAGTCAAACTTAACTCCCCTACTCTAATCTGCATACATGCTATCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTCAAACTTAACTCCCCTACTCTAATCTGCATACATGCTATCT  850

seq1  GCCTTAAATGCCATGCCTCTGACCATGTACAGAGGCTTCTAATCTTGTAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAAATGCCATGCCTCTGACCATGTACAGAGGCTTCTAATCTTGTAC  900

seq1  AGAGGTTGCTTCCGGATTTTATTCTCCTGTGTCTGGTAAATTCTACATTA  950
      ||||||||||||| ||||||| ||||||||||||||||||||||||||||
seq2  AGAGGTTGCTTCC-GATTTTA-TCTCCTGTGTCTGGTAAATTCTACATTA  948

seq1  TCTCTGAAAAGCTTTCTTTGACATCCTTAGGAAGCTGTTATCTGTATTTC  1000
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTCTG-AAAGCTTTCTTTGACATCCTTAGG-AGCTGTTATCTGTATTTC  996

seq1  CATGCTTTCATGTCTTGGTTATAATAAG-TATTGTACTGCAGCATTTACT  1049
      ||||||||||| |||  ||||||||||| ||||||||||||||| |||||
seq2  CATGCTTTCATTTCT--GTTATAATAAGTTATTGTACTGCAGCA-TTACT  1043

seq1  GTTGCCTGTGGTTTCCCAGTTGATGGGTA  1078
      |||| ||||||||| |||||||| |||||
seq2  GTTG-CTGTGGTTT-CCAGTTGA-GGGTA  1069