BAC Information

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BAC

Clone NameB6Ng01-128P06
Chromosome1 (Build37)
Map Location 153,975,219 - 153,976,326
singlet/doubletsinglet
Overlap geneLOC668076
Upstream geneLOC668040, LOC676758, EG668050, LOC668055, 3110040M04Rik, LOC100043286, Ivns1abp, 1200016B10Rik, 1190005F20Rik, Rnf2, Niban, Edem3, 1700025G04Rik
Downstream gene5730449L18Rik, Glt25d2, Rgl1, EG639787, Apobec4, Arpc5, Ncf2, Smg7, EG668097, Nmnat2, Lamc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128P06.bB6Ng01-128P06.g
ACCDH930666DH930667
length1,2381,089
definitionDH930666|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P06, 5' end.DH930667|Mus musculus domesticus DNA, BAC clone: B6Ng01-128P06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatcaaacacttaaagaagaatgaatgtggtctttatcaaactt
gcccaacaattaaaaaagaaacaattcctaacttatcacccaacaattaa
aaaagaaacacttcctaacttatttgataagataatcctaattctaaaat
aatcctcatgccaaagccaaagccactattctacacaaaagttgactaca
gaccaatatctttgaccgacactgatatgaaactaacaaaataatagcat
acttaatatactattgtggagtacaataaaaagcattataaaccataacc
aaattgattttgctcctggaatccaggatggctcagccatgtatggctga
ggagggtcggctatgacaccatttattaacaggcagacagatcaagaaga
agacttggcaaaatccaacacttattcatgatttaaaggtcaacaacgta
ggaaaagaggataaaacatgacaaaagctatatataaactccacagtaaa
caacagtagcctcaacagccaaaagctggtaactctttaatattcaggac
aaagaaaaaagaagaaaataaatgtctgcttttaccacttctgcttggca
cataacttgaagttcttgagcaatagggtaagaaagaggaagaaaaagta
tcaaagttgtaaaaaaggatacattggcagatgacataatctgtactgca
gaaaaatccgggaaaaaaaaaaaaacttcacaaaataaggtgttaagact
aacacgttatttatttatttattttatttatttatttattttcaaaagaa
ccaactatcatcagcataatgtggtaccgatataaaggaagacagagaac
aacggaatggaatggaaggctcaaaataagctcttacatattcggttgaa
tgatttctggcaaaggggtcaagacagagcaggaaagatgcatactttct
ttgaacactgggtttgaaaagacaggcatctgcatgcacaaacaaagctg
gccctaatcccatgcacagacttagtcaaacggatcagatattgagccag
cactacccactctcagaacagcgaagacaacctattggcagcaccataca
gagccacccaaccagatgctgcaggttccatgccatcctctccagtacaa
cgggcagcgctgagctttcactaccttgtcagtgtcagagctctgcaggc
actcaagccaacccttaactgtcccaagcgtgaactat
gaattcaacagtggtgcgtgtcttcctgtgagccaggtgtcccagcctgg
cctttcctttgatgacgctgtagggcacccccatctttcgacatggggca
ggcaggaaaaccactagctcaatggggtctacatcatgggcaatcaccac
cagctgagccttcttgttctccaccaaggtggtgactgtattgcctcctg
ctcagaggacaggtggtctctcaattgggatatcccctttgccagcagct
ttcttctcagcacgggccaggagcctttgcttcttctcttgctttgtctc
tggcctgttcttgtgggcaagcttaagcagctgagtagctgtttgcatgt
ccagggcctgggtgaactggttaatgacaggaggtactttgagctgctta
tagaggatggctcttggccgctgcagcctgatgtagcggggccatttgac
gaagcgtgttaaatctcttttgggctggatgtcctgcccaatgccgaagt
tctcgggccttttctcaaacaaagggttgaccacctttttggcctcctat
ttactgatgacagtgggggccagggccaccttcatccccttggcctgttt
tcctttgggcatcttcatcggctggtgaagagagtggaacatttctaaaa
agaaatttgatctagaagatcttaaaactaaaattttaactccataataa
gcagtgaaaaggagaaagtctcacctgtcaatgagtgagatgagtcctct
gagccggcaataacaggtacatagtgcctgccttgtttttcatgatggaa
atagacattttagaatgtagtatctatctagaaatacttttacaagtaag
agaagaaaaagtatggagctaaaacgtcattttaaccaaagagaaaacaa
aaacaaaacccggtaaacagaattaattcaaaaagagttttaaaacatca
cttgaagtacatgatctattgcaaactgagtatgtcattaaaggaattta
tttataaatgactgaaattgaaatgaacaaggaaggtggccagagtaaaa
cctcttggcatggatacctatgatctgggcctgaaccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_153975219_153976326
seq2: B6Ng01-128P06.g_68_1156 (reverse)

seq1  AGGGTTCAGACCCAGATCATTAGGTTTCCATGGCAAGTGTCTTTACCCTG  50
      ||||||||| ||||||||| ||||| |||||| |||| |  ||||| || 
seq2  AGGGTTCAGGCCCAGATCA-TAGGTATCCATGCCAAGAGGTTTTACTCT-  48

seq1  GGCCACCTCCCTGGTCCTTCTCAACTTCAGTCATCTATATAATTAAATTC  100
      |||||||| ||| || | | |||| ||||||||  | ||||| |||||||
seq2  GGCCACCTTCCTTGTTCATTTCAATTTCAGTCA--TTTATAAATAAATTC  96

seq1  CCTTATTGACATACTCAAGTTTGCAATAGATCATGTACTTCATGTTGTTG  150
      | ||| |||||||||| ||||||||||||||||||||||||| | || ||
seq2  CTTTAATGACATACTC-AGTTTGCAATAGATCATGTACTTCAAG-TGATG  144

seq1  TTTTTTAAATACTACTCTTTGAATTAATTTCTTGTTCTACCGGGTTTTTG  200
      ||||   || ||| || ||||||||||||   |||| ||||||||||   
seq2  TTTT---AAAACT-CTTTTTGAATTAATT--CTGTT-TACCGGGTTT---  184

seq1  TTTTTTTGTTTTCTCTTTTGGTTAAAATGACGTTTTAGCTCCATACTTTT  250
      | ||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTTTTTGTTTTCTC-TTTGGTTAAAATGACGTTTTAGCTCCATACTTTT  233

seq1  TCTTCTCCTAACTTGTAAAAGTATTTCTAGATAGATACTACATTCTAAAA  300
      |||||| || ||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCT-CTTACTTGTAAAAGTATTTCTAGATAGATACTACATTCTAAAA  282

seq1  TGTCTATTTCCATCATGAAAAACAAGGCAGGCACTATGAACCTGTTATTG  350
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGTCTATTTCCATCATGAAAAACAAGGCAGGCACTATGTACCTGTTATTG  332

seq1  CCGGCTCAGAGGACTCATCTCACTCATTGACAGGTGAGACTTTCTCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CCGGCTCAGAGGACTCATCTCACTCATTGACAGGTGAGACTTTCTCC-TT  381

seq1  TTCACTGCTTATTATGGAGTTAAAATTTTAGTTTTAAGATCTTCTTGATC  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTCACTGCTTATTATGGAGTTAAAATTTTAGTTTTAAGATCTTCTAGATC  431

seq1  AAATTTCTTTTTAGAAATGTTCCACTCTCTTCACCAGCCGATGAAGATGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTTTTAGAAATGTTCCACTCTCTTCACCAGCCGATGAAGATGC  481

seq1  CCAAAGGAAAACAGGCCAAGGGGAAGAAGGTGGCCCTGGCCCCCACTGTC  550
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCAAAGGAAAACAGGCCAAGGGGATGAAGGTGGCCCTGGCCCCCACTGTC  531

seq1  ATCAGTAAATAGGAGGCCAAAAAGGTGGTCAACCCTTTGTTTGAGAAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTAAATAGGAGGCCAAAAAGGTGGTCAACCCTTTGTTTGAGAAAAG  581

seq1  GCCCGAGAACTTCGGCATTGGGCAGGACATCCAGCCCAAAAGAGATCTAA  650
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCCCGAGAACTTCGGCATTGGGCAGGACATCCAGCCCAAAAGAGATTTAA  631

seq1  CACGCTTCGTCAAATGGCCCCGCTACATCAGGCTGCAGCGGCCAAGAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCTTCGTCAAATGGCCCCGCTACATCAGGCTGCAGCGGCCAAGAGCC  681

seq1  ATCCTCTATAAGCAGCTCAAAGTACCTCCTGTCATTAACCAGTTCACCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTCTATAAGCAGCTCAAAGTACCTCCTGTCATTAACCAGTTCACCCA  731

seq1  GGCCCTGGACATGCAAACAGCTACTCAGCTGCTTAAGCTTGCCCACAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGGACATGCAAACAGCTACTCAGCTGCTTAAGCTTGCCCACAAGA  781

seq1  ACAGGCCAGAGACAAAGCAAGAGAAGAAGCAAAGGCTCCTGGCCCGTGCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCAGAGACAAAGCAAGAGAAGAAGCAAAGGCTCCTGGCCCGTGCT  831

seq1  GAGAAGAAAGCTGCTGGCAAAGGGGATATCCCAATTGAGAGACCACCTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGAAAGCTGCTGGCAAAGGGGATATCCCAATTGAGAGACCACCTGT  881

seq1  CCTCTGAGCAGGAGGCAATACAGTCACCACCTTGGTGGAGAACAAGAAGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGAGCAGGAGGCAATACAGTCACCACCTTGGTGGAGAACAAGAAGG  931

seq1  CTCAGCTGGTGGTGATTGCCCATGATGTAGACCCCATTGAGCTAGTGGTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGGTGGTGATTGCCCATGATGTAGACCCCATTGAGCTAGTGGTT  981

seq1  TTCCTGCCTGCCCCATGTCGAAAGATGGGGGTGCCCTACAGCGTCATCAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCTGCCCCATGTCGAAAGATGGGGGTGCCCTACAGCGTCATCAA  1031

seq1  AGGAAAGGCCAGGCTGGGACACCTGGCTCACAGGAAGACACGCACCACTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGGCCAGGCTGGGACACCTGGCTCACAGGAAGACACGCACCACTG  1081

seq1  TTGAATTC  1108
      ||||||||
seq2  TTGAATTC  1089