BAC Information

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BAC

Clone NameB6Ng01-129M05
Chromosome1 (Build37)
Map Location 148,815,184 - 148,927,969
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC383571, B830045N13Rik, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129M05.bB6Ng01-129M05.g
ACCDH931263DH931264
length1,0481,048
definitionDH931263|Mus musculus domesticus DNA, BAC clone: B6Ng01-129M05, 5' end.DH931264|Mus musculus domesticus DNA, BAC clone: B6Ng01-129M05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,815,184 - 148,816,211)(148,926,900 - 148,927,969)
sequence
gaattctgtttcatttcctattttcatcatgattctattcaaaaatttta
gaagaaaatcttcatttcccctttccattttttgtttctcttggtcttac
aaaactcacgtccagatagacttcctctatataattcgatgaaggttacc
attttagtgattattgcccaactatttgcttaacccaaatgtttatctct
tccttagtttcatttaaactatcagatcatattgcacaattgaatcttca
cttttatttctgtaattctctacagttgaaggtgagtttagaagtttcct
ttttgaagttgagtaaatgttttttttgactacaaaactaattctataga
gattactagaaatcttactttggactaaatagaagattctattctattag
actatttatcatctagaagatgtcttatgatgataaataatgatctgatt
aaacatggtagagagttttcaaaagaagaaacagatattgttgttaaaca
ctatacaaagcttttggcacccttatcaacctcatgagtcaaaatggcca
acataaaaaaatataaataataagaaattctgatgtgtgtggaaacaaga
gtagttatacaatacttgtggtatgcaaactacaacagccaccttgcgaa
ctaatctgtatgtttctaaggaaaaaaaaaaaagaaacaaaactaccatt
taaaccatctgtacttttgcactgcacttaggtatatacccaaaggactc
cctattctacaacagagatatttgcgtattttattcatttctcttttatt
cacagtagctagaaatgcaatcagcctagatgtctatcaacagatgaata
gacaattgaaatgtgatgatatatactcaattgaattctattcagctata
aagaaaaatgaaattttcaggaatgaatgcaagtaggaaaattatattga
gtgaattactatgtgcagaagtcaacattacatgtccctttctatgtgaa
tcatggattgatatttttagaattgttttatttttaatagaattcctt
gaattccaggagaaaagtctaggcactaggaaaggaggaaggtgccgagg
gtaagcatggttaaagcacatgataaacttgtaaagaagctctgttttac
caccctgcggacaatgcctgtgtgccaacaaaaacaaacgaacaaatacc
tctttgcttcccattagcagtaattcatgactttcctaaatgaatgttct
taaactttccttggaagttttatattctagtcatatccatatggactttt
ggttttgattcttttagatgacttgaacattgcttctagcaccacagcag
taagtaggtttcttccttgagctcctgagaaatctgaattaatcaaaaat
cggcatattctcactggcaaactttcaaaggagattcctctctgcaaagc
ctgtgaagctatgggaggcagcatctgttgcatctttggttttgtttgct
acgttgtagagacttgagtgttggttctttgtcattctgttggagcttat
ttttcttttttcttaattgaaaggccaacagctggctctttttgttacat
ccatttccccatgtaccttgaaaataagactgatttaaaatgcaaaggtg
cagttaagtatctaaaagttgattctcttgcttgtaacagggattacata
tactgggcacatggagcatttcaactttattcttacttcagcacctatat
acattcttatatcttatacatctcctgtgacagactagctgcctggtagc
atggttttccaaaaagcagatctgcttcctgtaagtctctcccacgtaga
aggaagaagagagggggatacacagaggggcaaatgtgagtctcatggtt
gctaaaacagggtatcgctgtacgtttaccactctttttctagagttact
ctgtggtctttctttattgatctagttaaactcttgcatctggtctactc
catgtctactaattctctttagagcacatgaaaaaagatcttctgggttg
agaagagagcaatgggagaccctcccaataatacttaacttgtttcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148815184_148816211
seq2: B6Ng01-129M05.b_46_1064

seq1  GAATTCTGTTTCATTTCCTATTTTCATCATGATTCTATTCAAAAATTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTTCATTTCCTATTTTCATCATGATTCTATTCAAAAATTTTA  50

seq1  GAAGAAAATCTTCATTTCCCCTTTCCATTTTTTGTTTCTCTTGGTCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATCTTCATTTCCCCTTTCCATTTTTTGTTTCTCTTGGTCTTAC  100

seq1  AAAACTCACGTCCAGATAGACTTCCTCTATATAATTCGATGAAGGTTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTCACGTCCAGATAGACTTCCTCTATATAATTCGATGAAGGTTACC  150

seq1  ATTTTAGTGATTATTGCCCAACTATTTGCTTAACCCAAATGTTTATCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTGATTATTGCCCAACTATTTGCTTAACCCAAATGTTTATCTCT  200

seq1  TCCTTAGTTTCATTTAAACTATCAGATCATATTGCACAATTGAATCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGTTTCATTTAAACTATCAGATCATATTGCACAATTGAATCTTCA  250

seq1  CTTTTATTTCTGTAATTCTCTACAGTTGAAGGTGAGTTTAGAAGTTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTATTTCTGTAATTCTCTACAGTTGAAGGTGAGTTTAGAAGTTTCCT  300

seq1  TTTTGAAGTTGAGTAAATGTTTTTTTTGACTACAAAACTAATTCTATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAAGTTGAGTAAATGTTTTTTTTGACTACAAAACTAATTCTATAGA  350

seq1  GATTACTAGAAATCTTACTTTGGACTAAATAGAAGATTCTATTCTATTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACTAGAAATCTTACTTTGGACTAAATAGAAGATTCTATTCTATTAG  400

seq1  ACTATTTATCATCTAGAAGATGTCTTATGATGATAAATAATGATCTGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATTTATCATCTAGAAGATGTCTTATGATGATAAATAATGATCTGATT  450

seq1  AAACATGGTAGAGAGTTTTCAAAAGAAGAAACAGATATTGTTGTTAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGTAGAGAGTTTTCAAAAGAAGAAACAGATATTGTTGTTAAACA  500

seq1  CTATACAAAGCTTTTGGCACCCTTATCAACCTCATGAGTCAAAATGGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAAAGCTTTTGGCACCCTTATCAACCTCATGAGTCAAAATGGCCA  550

seq1  ACATAAAAAAATATAAATAATAAGAAATTCTGATGTGTGTGGAAACAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAAAAAATATAAATAATAAGAAATTCTGATGTGTGTGGAAACAAGA  600

seq1  GTAGTTATACAATACTTGTGGTATGCAAACTACAACAGCCACCTTGCGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTATACAATACTTGTGGTATGCAAACTACAACAGCCACCTTGCGAA  650

seq1  CTAATCTGTATGTTTCTAAGGAAAAAAAAAAAAGAAACAAAACTACCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTGTATGTTTCTAAGGAAAAAAAAAAAAGAAACAAAACTACCATT  700

seq1  TAAACCATCTGTACTTTTGCACTGCACTTAGGTATATACCCAAAGGACTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATCTGTACTTTTGCACTGCACTTAGGTATATACCCAAAGGACTC  750

seq1  CCTATTCTACAACAGAGATATTTGCGTATTTTATTCATTTCTCTTTTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTCTACAACAGAGATATTTGCGTATTTTATTCATTTCTCTTTTATT  800

seq1  CACAGTAGCTAGAAATGCAATCAGCCTAGATGTCTATCAACAGATGAATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTAGCTAGAAATGCAATCAGCCTAGATGTCTATCAACAGATGAATA  850

seq1  GACAATTGAAATGTGATGAATATATACTCAATTGAATTCTATTCAGCTAT  900
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  GACAATTGAAATGTGATG-ATATATACTCAATTGAATTCTATTCAGCTAT  899

seq1  AAAGAAAAATGAAATTTTCAGGAAATGAATGCAAGTAGGAAAAATTATAT  950
      |||||||||||||||||||||| |||||||||||||||| ||||||||||
seq2  AAAGAAAAATGAAATTTTCAGG-AATGAATGCAAGTAGG-AAAATTATAT  947

seq1  TGAGTGAAATAACTATGTGCAGAAAGTCAAACATTACATGTTCCCTTTCC  1000
      |||||| ||| ||||||||||| ||||| ||||||||||| ||||||| |
seq2  TGAGTG-AATTACTATGTGCAG-AAGTC-AACATTACATG-TCCCTTT-C  992

seq1  TATGTGAATCATGGATTTGATATTTTTA  1028
      ||||||||||||||| ||||||||||||
seq2  TATGTGAATCATGGA-TTGATATTTTTA  1019

seq1: chr1_148926900_148927969
seq2: B6Ng01-129M05.g_69_1116 (reverse)

seq1  GTGAAACAATGTTAAGTATTATTGTGGAGGGGTCTCCCATTGCCTCTCTT  50
      ||||||||| |||||||||||||| ||| ||||||||||||| |||||||
seq2  GTGAAACAA-GTTAAGTATTATTG-GGA-GGGTCTCCCATTG-CTCTCTT  46

seq1  CTCCAACCCAGAAGAATTCTTTTTTTCATGTGCTCCTAAAAGAGAATTTA  100
      || ||||||||||||  || |||||||||||||||   |||||||| |||
seq2  CT-CAACCCAGAAGA--TC-TTTTTTCATGTGCTC--TAAAGAGAA-TTA  89

seq1  GTTAAGACATGGGAGTAGACCAAGATGCCAAGAGTTTAACTAGATCAAAT  150
      ||  |||||| |||||||||| ||||| |||||||||||||||||| |||
seq2  GT--AGACAT-GGAGTAGACC-AGATG-CAAGAGTTTAACTAGATC-AAT  133

seq1  AAAGAAAGACCACAAGAGTATACTCTAGAAAAAGAGTGGTAAACCGTACA  200
      ||||||||||||| |||||| |||||||||||||||||||||| ||||||
seq2  AAAGAAAGACCAC-AGAGTA-ACTCTAGAAAAAGAGTGGTAAA-CGTACA  180

seq1  GCGATACCCCTGTTTTAGCAACCATGAGACTCACATTTGCCCCTCTGTGT  250
      |||||| |||||||||||||||||||||||||||||||||||||||||| 
seq2  GCGATA-CCCTGTTTTAGCAACCATGAGACTCACATTTGCCCCTCTGTG-  228

seq1  TATCCCCCTCTCTTCTTCCTTCTACGTGGGAGAGACTTACAGGAAGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCCCTCTCTTCTTCCTTCTACGTGGGAGAGACTTACAGGAAGCAGA  278

seq1  TCTGCTTTTTGGAAAACCATGCTACCAGGCAGCTAGTCTGTCACAGGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTTTTTGGAAAACCATGCTACCAGGCAGCTAGTCTGTCACAGGAGA  328

seq1  TGTATAAGATATAAGAATGTATATAGGTGCTGAAGTAAGAATAAAGTTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAGATATAAGAATGTATATAGGTGCTGAAGTAAGAATAAAGTTGA  378

seq1  AATGCTCCATGTGCCCAGTATATGTAATCCCTGTTACAAGCAAGAGAATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCCATGTGCCCAGTATATGTAATCCCTGTTACAAGCAAGAGAATC  428

seq1  AACTTTTAGATACTTAACTGCACCTTTGCATTTTAAATCAGTCTTATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTAGATACTTAACTGCACCTTTGCATTTTAAATCAGTCTTATTTT  478

seq1  CAAGGTACATGGGGAAATGGATGTAACAAAAAGAGCCAGCTGTTGGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTACATGGGGAAATGGATGTAACAAAAAGAGCCAGCTGTTGGCCTT  528

seq1  TCAATTAAGAAAAAAGAAAAATAAGCTCCAACAGAATGACAAAGAACCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAAGAAAAAAGAAAAATAAGCTCCAACAGAATGACAAAGAACCAA  578

seq1  CACTCAAGTCTCTACAACGTAGCAAACAAAACCAAAGATGCAACAGATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAAGTCTCTACAACGTAGCAAACAAAACCAAAGATGCAACAGATGC  628

seq1  TGCCTCCCATAGCTTCACAGGCTTTGCAGAGAGGAATCTCCTTTGAAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCATAGCTTCACAGGCTTTGCAGAGAGGAATCTCCTTTGAAAGT  678

seq1  TTGCCAGTGAGAATATGCCGATTTTTGATTAATTCAGATTTCTCAGGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAGTGAGAATATGCCGATTTTTGATTAATTCAGATTTCTCAGGAGC  728

seq1  TCAAGGAAGAAACCTACTTACTGCTGTGGTGCTAGAAGCAATGTTCAAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAAGAAACCTACTTACTGCTGTGGTGCTAGAAGCAATGTTCAAGT  778

seq1  CATCTAAAAGAATCAAAACCAAAAGTCCATATGGATATGACTAGAATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAAAGAATCAAAACCAAAAGTCCATATGGATATGACTAGAATATA  828

seq1  AAACTTCCAAGGAAAGTTTAAGAACATTCATTTAGGAAAGTCATGAATTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTCCAAGGAAAGTTTAAGAACATTCATTTAGGAAAGTCATGAATTA  878

seq1  CTGCTAATGGGAAGCAAAGAGGTATTTGTTCGTTTGTTTTTGTTGGCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAATGGGAAGCAAAGAGGTATTTGTTCGTTTGTTTTTGTTGGCACA  928

seq1  CAGGCATTGTCCGCAGGGTGGTAAAACAGAGCTTCTTTACAAGTTTATCA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCATTGTCCGCAGGGTGGTAAAACAGAGCTTCTTTACAAGTTTATCA  978

seq1  TGTGCTTTAACCATGCTTACCCTCGGCACCTTCCTCCTTTCCTAGTGCCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTTTAACCATGCTTACCCTCGGCACCTTCCTCCTTTCCTAGTGCCT  1028

seq1  AGACTTTTCTCCTGGAATTC  1070
      ||||||||||||||||||||
seq2  AGACTTTTCTCCTGGAATTC  1048