BAC Information

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BAC

Clone NameB6Ng01-130A22
Chromosome12 (Build37)1 (Build37)
Map Location 26,394,736 - 26,394,98825,070,995 - 25,072,020
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneRrm2, LOC668719, Mboat2, EG629397, C330002I19Rik, Id2, LOC100042973, LOC100042974
Downstream geneLOC668726, Rnf144, Rsad2, Tyki, LOC668731, 1700020D12Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130A22.bB6Ng01-130A22.g
ACCDH931469DH931470
length6051,011
definitionDH931469|Mus musculus domesticus DNA, BAC clone: B6Ng01-130A22, 5' end.DH931470|Mus musculus domesticus DNA, BAC clone: B6Ng01-130A22, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(26,394,736 - 26,394,988)(25,070,995 - 25,072,020)
sequence
gaattcatatgtgtgcgtgtgtctgtcttgtcgaatgtgaaagacactgc
ctcctcagaatcatctatcacctcataaatcttacagaatttcagcttcc
tcttatgcatagatccctgagctctgaaggaggggcttaatgaagacatt
ccatgaggactgaatgctccaaagtctctcactctctgcatgttgtcgag
gtgtgggtctttgtgttagttcccatctgctgcaagaaaaagcctccagt
ggtggctgggtgaggccctgatttatgggaatgacagaatatcattagtg
taactttactgctatattcctttagcagagcagtggtacttggttcagga
agcaacattttttttcttttttttttaaattttttaaatatatttcttat
tgggtatttacttcatttacatttccaatgctatcccaaaagtcccccac
aggctccccacccactcccctacccacccactcccacttcttggccctgt
acttaggcatataaagtttgcactacgaatgggcctctctttccactgat
ggctgactaggccatcttctgattcatatgcagctagagacacgagctcc
ggggg
gaattctctgttagttcaggcaccgtaagtctaggtgcccaaatttctca
cttttcagttagaaactctcctttgaatttctagagttctctgataaatt
atgaaccaacatttcagtgatatggcttccaatgggagggattttcccat
ctataagcgaccgagcaagaattaactatcagcagttgttatttaaatta
aagtctaaaagccaaggaatttactagaagtgctcatctatacccaaaca
tctatctttatttggcatataaaatggacatatatgttttaattagacag
gaaagctaatatcagtacctgcaattccattaaagaagtttctcctaggg
ccacagtggaaaggcagccctactagcaaatgaaatagaaataggaaaga
atttttcttacttagtcttcatgagaaaatatttccttcaaattttataa
ttttatttttataccctcaaattgttcaaaattacagctataagagcaat
tacatctactttgtcctgatagccaagccattcaaatccatttaaatcca
gctttagcatgaggcttattctcttctcaccacagaacagaaattctcag
cacccagcaaattcacttgtttcattattgcctcaaaacaaaggacatct
tttgtcttaaataaaagttagcattgaagaatgaaaaattactggcctct
tgtgagaacatgaactttcacctcggagcccaccccctcccatctggaaa
acatacttgagaaaaaacattttctggaacaaccacagaatgtttcaaca
ggccagatgtatgatatgactctttggttgagtaaacttgtggttgtaaa
cttcccctatccctccccattcccctcccagtttgtggtttttctttaaa
gctgtgaaaatttgagtcgtcgtcgagactctctaccctgtgctaaggtg
tatgagttcgacccagagctctgtgtgctttcatgttgctgcttattcca
cccagagctct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_26394736_26394988
seq2: B6Ng01-130A22.b_404_651

seq1  TTTTTTTTCTTTTTTTTT---AGTAGGTATATATATTTTCTTATTAGGTA  47
      ||||||||||||||||||   | |   || ||||| ||||||||| ||||
seq2  TTTTTTTTCTTTTTTTTTTAAATTTTTTAAATATA-TTTCTTATTGGGTA  49

seq1  TTTTCTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCATACCCTC  97
      ||| ||||||||||||||||||||||||||||||||||||||| |  || 
seq2  TTTACTTCATTTACATTTCCAATGCTATCCCAAAAGTCCCCCACAGGCT-  98

seq1  CCCCCCCCCACTCCCCTACCCACCCACTCCCACTTCTTGGCCCTGGCGTT  147
       |||| ||||||||||||||||||||||||||||||||||          
seq2  -CCCCACCCACTCCCCTACCCACCCACTCCCACTTCTTGG----------  137

seq1  CCCCTGTACTGAGGCATATAAAGTTTGCACGACCAATGGGCCTCTCTTTC  197
       ||||||||| ||||||||||||||||||| || ||||||||||||||||
seq2  -CCCTGTACTTAGGCATATAAAGTTTGCACTACGAATGGGCCTCTCTTTC  186

seq1  CACTGATGGTCAACTAGGCTATCTTCTGATACATATGCAGCT------AC  241
      |||||||||   ||||||| |||||||||| |||||||||||      ||
seq2  CACTGATGGCTGACTAGGCCATCTTCTGATTCATATGCAGCTAGAGACAC  236

seq1  GAGCTCTGGGGG  253
      |||||| |||||
seq2  GAGCTCCGGGGG  248

seq1: chr1_25070995_25072020
seq2: B6Ng01-130A22.g_67_1077

seq1  GAATTCTCTGTTAGTTCAGGCACCGTAAGTCTAGGTGCCCAAATTTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGTTAGTTCAGGCACCGTAAGTCTAGGTGCCCAAATTTCTCA  50

seq1  CTTTTCAGTTAGAAACTCTCCTTTGAATTTCTAGAGTTCTCTGATAAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCAGTTAGAAACTCTCCTTTGAATTTCTAGAGTTCTCTGATAAATT  100

seq1  ATGAACCAACATTTCAGTGATATGGCTTCCAATGGGAGGGATTTTCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCAACATTTCAGTGATATGGCTTCCAATGGGAGGGATTTTCCCAT  150

seq1  CTATAAGCGACCGAGCAAGAATTAACTATCAGCAGTTGTTATTTAAATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGCGACCGAGCAAGAATTAACTATCAGCAGTTGTTATTTAAATTA  200

seq1  AAGTCTAAAAGCCAAGGAATTTACTAGAAGTGCTCATCTATACCCAAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTAAAAGCCAAGGAATTTACTAGAAGTGCTCATCTATACCCAAACA  250

seq1  TCTATCTTTATTTGGCATATAAAATGGACATATATGTTTTAATTAGACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCTTTATTTGGCATATAAAATGGACATATATGTTTTAATTAGACAG  300

seq1  GAAAGCTAATATCAGTACCTGCAATTCCATTAAAGAAGTTTCTCCTAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTAATATCAGTACCTGCAATTCCATTAAAGAAGTTTCTCCTAGGG  350

seq1  CCACAGTGGAAAGGCAGCCCTACTAGCAAATGAAATAGAAATAGGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTGGAAAGGCAGCCCTACTAGCAAATGAAATAGAAATAGGAAAGA  400

seq1  ATTTTTCTTACTTAGTCTTCATGAGAAAATATTTCCTTCAAATTTTATAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTTACTTAGTCTTCATGAGAAAATATTTCCTTCAAATTTTATAA  450

seq1  TTTTATTTTTATACCCTCAAATTGTTCAAAATTACAGCTATAAGAGCAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTTATACCCTCAAATTGTTCAAAATTACAGCTATAAGAGCAAT  500

seq1  TACATCTACTTTGTCCTGATAGCCAAGCCATTCAAATCCATTTAAATCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATCTACTTTGTCCTGATAGCCAAGCCATTCAAATCCATTTAAATCCA  550

seq1  GCTTTAGCATGAGGCTTATTCTCTTCTCACCACAGAACAGAAATTCTCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGCATGAGGCTTATTCTCTTCTCACCACAGAACAGAAATTCTCAG  600

seq1  CACCCAGCAAATTCACTTGTTTCATTATTGCCTCAAAACAAAGGACATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGCAAATTCACTTGTTTCATTATTGCCTCAAAACAAAGGACATCT  650

seq1  TTTGTCTTAAATAAAAGTTAGCATTGAAGAATGAAAAATTACTGGCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTAAATAAAAGTTAGCATTGAAGAATGAAAAATTACTGGCCTCT  700

seq1  TGTGAGAACATGAACTTTCACCTCGGAGCCCACCCCCTCCCATCTGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGAACATGAACTTTCACCTCGGAGCCCACCCCCTCCCATCTGGAAA  750

seq1  ACATACTTGAGAAAAAACATTTTCTGGAACAACCACAGAATGTTTCAACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACTTGAGAAAAAACATTTTCTGGAACAACCACAGAATGTTTCAACA  800

seq1  GGCCAGATGTATTGATATGACTCTTTGGTTGAGTAAACTTGTGGTTGTTA  850
      ||||||||||| ||||||||||||||||||||||||||||||||||| ||
seq2  GGCCAGATGTA-TGATATGACTCTTTGGTTGAGTAAACTTGTGGTTG-TA  848

seq1  AACTTCCCCTATTCCCTCCCCATTCCCCCTCCCAGTTTGTGGTTTTTTCC  900
      ||||||||||| |||||||||||| ||||||||||||||||||||||  |
seq2  AACTTCCCCTA-TCCCTCCCCATT-CCCCTCCCAGTTTGTGGTTTTT--C  894

seq1  TTTAAAAGCTTGTGAAAAATTTGAGTCGTCGTCGAGACTCCTCTACCCTG  950
      ||| ||||| |||| |||||||||||||||||||||||| ||||||||||
seq2  TTT-AAAGC-TGTG-AAAATTTGAGTCGTCGTCGAGACT-CTCTACCCTG  940

seq1  TGCTAAGGTGTATGAGTTTCGACCCCAGAGCTCTGTGTGCTTTCATGTTG  1000
      |||||||||||||||| ||||| |||||||||||||||||||||||||||
seq2  TGCTAAGGTGTATGAG-TTCGA-CCCAGAGCTCTGTGTGCTTTCATGTTG  988

seq1  CTGCTTTATTTCAACCCCAGAGCTCT  1026
      |||| ||||| ||  |||||||||||
seq2  CTGC-TTATTCCA--CCCAGAGCTCT  1011