BAC Information

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BAC

Clone NameB6Ng01-130J10
Chromosome1 (Build37)
Map Location 148,640,984 - 148,641,987
singlet/doubletsinglet
Overlap geneB830045N13Rik
Upstream geneLOC383571, LOC100043240
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130J10.bB6Ng01-130J10.g
ACCDH931864DH931865
length1,254991
definitionDH931864|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J10, 5' end.DH931865|Mus musculus domesticus DNA, BAC clone: B6Ng01-130J10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaagcccatgatctgttcaaggactttctaggacgttgtaacac
tggtgaaggcttagctatgtcagaattcaatcttaaaaggcacttataat
aagataatactaaaagagagcacgtggatccatacaccagactaacgcgg
gaatggaatatgagtatatgggttaacaagaacgccagactccaggaggt
gagtttccatgaaactcttggtctcgtgagtggcttccaggcctctcggc
ttgtcaagctgactggaccggagtgcatggcaaacactcaaattgatttc
tgagtggttgacaagtttgcaaccttattagcaatgccagagtgtttccc
ttttacacattcttgccagcatgtgctgaacctttagttactgatcttgg
tcattcttataagtataagatagaatctcagtgtcatttggatttgcata
tccctgttgactaaagattttgaatatttcatgaagagcttcttggccat
tagatattccactgattagaattttctaattctggaccctattgcttaat
tggtttatttagtttcttgacagctcatttctttttattattatttatta
ttgttttcttcataacttatttttttcttttatttactttttttacacta
cagattttattccccgcccccatcctcccaacaaatgttccacatctcat
atcttcttcatacccctctgtctccatgaggaagtccctctccctctaag
ccctcacccaaccagacctgtaaactacttggggcctccagtctcttgag
ggttaggtgcatctttctctgactgaacccagacccagcagtcctgtgct
ttatatgtgttgggggcctcatatcagctgaggtatgctgactggttggt
ggtccagtgtttgtgagactctggggtccaggttaactgagattgttggt
cctccttacagggtcaccctcttcttagcttctccacttttctttaattc
aacttacagggtcagcagattctgtccgtgttgggtgcaattatctgcat
ttgactctttcagctgcttgttgggtctttcgaggcaatcatgataagtc
cttttgtgacgattcatagcccgtaaatgtcagcttggaactcctttaga
ctggatccaattgggcgtgtgcgacctcttttccgagtctacaggtcatc
ggtgaattcgacgaatatacggtcaggtttatgtggcgatggaaacccac
atct
gaattcaaatctttccaggaaggttaattcactaacccaactgccccctc
atgggatccaaactcttctacacatcattttcattttttattttgcatat
atcttctaatattattatttccaataatatttctggattaaatattctat
cattagagatatcctctcacagttgctcacagatctaatagatcctgtct
tttctttctctagcttgtcccttgtattttctatgaacatccctgttctt
agtgacctagtccctttattctttttccttgagtccttaaatttgcttaa
ctactaaaacttcagatttctctaaaaggtttactgcttcaaatatttcc
tggttcaacttaatcatcatgaattagttaaaatgtctagaaaagttaag
gtagtcaaccaccaactcccagaatcctttgttccgttatgcctaggtta
gctgcttgaaaggccaaggccagagcagtttgttcctatagagattaaag
ttttctataataatgtccttaatccctctcccagaaatttttactaaagt
tgtatttgatgacaaatatcatatagaaaaaggcaagcatacaagaaaga
gcaatgccatctgtatactagaaagacacagaggcattattcaggttgat
ggtgctcccacagctgaaattgtgctatgcagtcacaccagacaccattt
attaagtcattgtagaaaacataaagggatagaaagaagcttactgcttc
taattattgactgctcttcagagtacctgtgtttgctgtctgtgcttcac
acaaaattacaaacctatctaagtacagagtatttgaagccctctctggc
atgctcatgatacatagtctacattaagaaaaatgccaccccacccatga
ataatataaaaaattgaaattatgcagtttacccctcccaaaatgtgtaa
acctaaactcagccacttatctttgggaaacattcgataca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_148640984_148641987
seq2: B6Ng01-130J10.g_69_1059 (reverse)

seq1  TGTATCAGATGTATCCCAAAGAATAATGTGGCTTGAGTTTTAGTTTATCA  50
      ||||||  |||| |||||||| |||| ||||| |||||||  ||||| ||
seq2  TGTATCGAATGTTTCCCAAAG-ATAA-GTGGC-TGAGTTTAGGTTTA-CA  46

seq1  CATTTTTGGGAGGGGTGAACTTGCATTATTTTCAATTTTTTTATATTATT  100
      || ||||||||||||| ||| |||| || |||||| ||||||||||||||
seq2  CA-TTTTGGGAGGGGTAAAC-TGCA-TAATTTCAA-TTTTTTATATTATT  92

seq1  CATGTGTGTGTTGGCATTTTTCTTAATGTACGACTATGTATCATGAGCAT  150
      |||| ||| | ||||||||||||||||||| |||||||||||||||||||
seq2  CATGGGTGGGGTGGCATTTTTCTTAATGTA-GACTATGTATCATGAGCAT  141

seq1  GCCAGAAGAGGGCTTCAAATACTCTGTACTTAGATAGGTTTGTATATTTT  200
      ||||| |||||||||||||||||||||||||||||||||||||| |||||
seq2  GCCAG-AGAGGGCTTCAAATACTCTGTACTTAGATAGGTTTGTA-ATTTT  189

seq1  GTGTG-AGCACAGACAGCAAACACAGGTACTCTGGAAGAGCAGTCAATAA  249
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTGTGAAGCACAGACAGCAAACACAGGTACTCT-GAAGAGCAGTCAATAA  238

seq1  TTAGAAGCAGTAAGCCTTCTTTCTATCCCTTTATGTTTTCTACAATGACT  299
      |||||||||||||| |||||||||||||||||||||||||||||||||| 
seq2  TTAGAAGCAGTAAG-CTTCTTTCTATCCCTTTATGTTTTCTACAATGAC-  286

seq1  TTATTAAATGGTGTCTGGTGTGACTGCATAGCACAATTTCAGCTGTGGGA  349
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAATGGTGTCTGGTGTGACTGCATAGCACAATTTCAGCTGTGGGA  336

seq1  GCACCATCAACCTGAATAATGCCTCTGTGTCTTTCTAGTATACAGATGGC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCATCAACCTGAATAATGCCTCTGTGTCTTTCTAGTATACAGATGGC  386

seq1  ATTGCTCTTTCTTGTATGCTTGCCTTTTTCTATATGATATTTGTCATCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCTTTCTTGTATGCTTGCCTTTTTCTATATGATATTTGTCATCAA  436

seq1  ATACAACTTTAGTAAAAATTTCTGGGAGAGGGATTAAGGACATTATTATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTTTAGTAAAAATTTCTGGGAGAGGGATTAAGGACATTATTATA  486

seq1  GAAAACTTTAATCTCTATAGGAACAAACTGCTCTGGCCTTGGCCTTTCAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTTTAATCTCTATAGGAACAAACTGCTCTGGCCTTGGCCTTTCAA  536

seq1  GCAGCTAACCTAGGCATAACGGAACAAAGGATTCTGGGAGTTGGTGGTTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAACCTAGGCATAACGGAACAAAGGATTCTGGGAGTTGGTGGTTG  586

seq1  ACTACCTTAACTTTTCTAGACATTTTAACTAATTCATGATGATTAAGTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCTTAACTTTTCTAGACATTTTAACTAATTCATGATGATTAAGTTG  636

seq1  AACCAGGAAATATTTGAAGCAGTAAACCTTTTAGAGAAATCTGAAGTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGGAAATATTTGAAGCAGTAAACCTTTTAGAGAAATCTGAAGTTTT  686

seq1  AGTAGTTAAGCAAATTTAAGGACTCAAGGAAAAAGAATAAAGGGACTAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTTAAGCAAATTTAAGGACTCAAGGAAAAAGAATAAAGGGACTAGG  736

seq1  TCACTAAGAACAGGGATGTTCATAGAAAATACAAGGGACAAGCTAGAGAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAAGAACAGGGATGTTCATAGAAAATACAAGGGACAAGCTAGAGAA  786

seq1  AGAAAAGACAGGATCTATTAGATCTGTGAGCAACTGTGAGAGGATATCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGACAGGATCTATTAGATCTGTGAGCAACTGTGAGAGGATATCTC  836

seq1  TAATGATAGAATATTTAATCCAGAAATATTATTGGAAATAATAATATTAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGATAGAATATTTAATCCAGAAATATTATTGGAAATAATAATATTAG  886

seq1  AAGATATATGCAAAATAAAAAATGAAAATGATGTGTAGAAGAGTTTGGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATATGCAAAATAAAAAATGAAAATGATGTGTAGAAGAGTTTGGAT  936

seq1  CCCATGAGGGGGCAGTTGGGTTAGTGAATTAACCTTCCTGGAAAGATTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGAGGGGGCAGTTGGGTTAGTGAATTAACCTTCCTGGAAAGATTTG  986

seq1  AATTC  1004
      |||||
seq2  AATTC  991