BAC Information

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BAC

Clone NameB6Ng01-130P09
Chromosome1 (Build37)
Map Location 17,575,726 - 17,576,365
singlet/doubletsinglet
Overlap genenone
Upstream geneUbe2w, Tceb1, LOC665480, Tmem70, Ly96, LOC100040056, LOC665496, EG545306, Jph1, Gdap1, LOC383495, Rbm6-ps1, Ppia-ps1_125.1
Downstream genePi15, Crispld1, LOC665564, LOC100040126, Crisp4, EG574082, EG654460, Defb17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130P09.bB6Ng01-130P09.g
ACCDH932142DH932143
length9091,002
definitionDH932142|Mus musculus domesticus DNA, BAC clone: B6Ng01-130P09, 5' end.DH932143|Mus musculus domesticus DNA, BAC clone: B6Ng01-130P09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagcaatacctctcctgggcatatatccagaagatgccccaactg
gtaagaaggacacatgctccactatgttcatagcagccttatttataata
gccagaagctggaaagaacccagatgcccctcaacagaggaatggataca
gaaaatgtggtacatctacacaatggagtactactcagctattaaaaaga
atgaatttatgaaattcctagacaaatagatggacctggagggcatcatc
ctgagtgaggtaacacattcacaaaggaactcacacaatatgtattcact
gataagtggataatagcccaaaacctaggatacccaagatataagataca
atttcctaaacacatgaaactcaagaaaaatgaagactgaagtgtggaca
ctatgcccctccttagaattgggaacaaaacacccttggaaggagttaca
gagacaaagtttggagctgagatgaaaggatggaccatgtagagactgcc
atatccagggatccaccccataatcagcatccaaacgctgacaccattgc
atacactagcaagattttatagaaaggacccagatgtagctgtctcttgt
gagactatgccggggcctagcaaacacagaagtgaatgctcacagtcagc
taatggatggatcacagggctcccaatggaggagctagagaaagttccca
aggagctaaagggatctgcaaccctataggtggaacaacattatgaacta
accagtaccccggagctcttgtctttagctgcatatgtatcaaaagatgg
cctagtcggccatcactggaaagagaggcccattggacacgcaaacttta
tatgccccagtacaggggaacgccagggccaaaaagggggagtgggtggg
taggggagt
gaattctttcctaagttttgtatctccagagttgtctcactttgggtttt
ctttattgtttctacttccctttttaggtcttccatgattttgttaaatt
ctatcacctgtttgtttgtgttttcctgtaattctttaagggtttatacc
tctttagcagtgttatcctgtatttctttaagtgagttattaatgccctt
cttaaagtcctctaccatcatcttgagatatgattttaaatctgagtctt
gcttttcgggtgtgttggggcatccaggactggctgaggtgggagtgctg
ggttctgatgatggtgagtggtcttggtttctgttagcaagattcttaag
ttttcttttcgccatctggtaatctctggtgttagttgttatagttgtct
ctggttggagcttgttactcctatgattctgtttgcctctgtcaccagtc
ctgggagtgcagctctcttcctgagtctcagtggtcagagtactctctgc
aggcaagctctcctcttgcagggaaggtgcacagatgtctggagttcaga
cctgtctcctggttgaagatgaaggcctgaaacatggcctgtcctgaaga
tgcgttgtgtctgcagtctttgtgctcacctgcagagactggtctctgat
ggacctgggataccagatggctctctcacctgcactggtggtcagagccc
tcccaggcatccacttctcctctggtgggaaaaggtgtctggatatttgg
agcctaaacggggtctgtcccagaagctatgtgcttctgcagtctgctgc
ttaccgtctgcagtcagtgagctgaccagagcagactggttctcaaggga
ccttgggaaacaattactcttctgatgattctgcaagttcttatgctggg
ttctctgcttaaagggatgttgggaaggtagcctcagcttagtagggtaa
cgcttgagacctgtatggagatttactctgacattaagatcttctaagcg
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_17575726_17576365
seq2: B6Ng01-130P09.g_448_1070

seq1  TGTTAGTTGTTATAGTTGTCTCTGGTTGGAGCTTGTTACTCCTATGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGTTGTTATAGTTGTCTCTGGTTGGAGCTTGTTACTCCTATGATTC  50

seq1  TGTTTGCCTCTGTCACCAGTCCTGGGAGTGCAGCTCTCTTCCTGAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCCTCTGTCACCAGTCCTGGGAGTGCAGCTCTCTTCCTGAGTCTC  100

seq1  AGTGGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCTTGCAGGGAAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTCAGAGTACTCTCTGCAGGCAAGCTCTCCTCTTGCAGGGAAGGTG  150

seq1  CACAGATGTCTGGAGTTCAGACCTGTCTCCTGGTTGAAGATGAAGGCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGATGTCTGGAGTTCAGACCTGTCTCCTGGTTGAAGATGAAGGCCTG  200

seq1  AAACATGGCCTGTCCTGAAGATGCGTTGTGTCTGCAGTCTTTGTGCTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGCCTGTCCTGAAGATGCGTTGTGTCTGCAGTCTTTGTGCTCAC  250

seq1  CTGCAGAGACTGGTCTCTGATGGACCTGGGATACCAGATGGCTCTCTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAGACTGGTCTCTGATGGACCTGGGATACCAGATGGCTCTCTCAC  300

seq1  CTGCACTGGTGGTCAGAGCCCTCCCAGGCATCCACTTCTCCTCTGGTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACTGGTGGTCAGAGCCCTCCCAGGCATCCACTTCTCCTCTGGTGGG  350

seq1  AAAAGGTGTCTGGATATTTGGAGCCTAAAACGGGGTCTGTCCCAGAAGCT  400
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAAGGTGTCTGGATATTTGGAGCCT-AAACGGGGTCTGTCCCAGAAGCT  399

seq1  ATGTTGCTTCTGCAGTCTGCTTGCTTACCCTCTGCAGTCAGTGAGCTGAC  450
      ||| |||||||||||||||| |||||||| ||||||||||||||||||||
seq2  ATG-TGCTTCTGCAGTCTGC-TGCTTACCGTCTGCAGTCAGTGAGCTGAC  447

seq1  CAGAGCAGACTGGTCTCCAAGGGACC-TGGGACACAAATTACTCTTCTTG  499
      ||||||||||||||   ||||||||| ||||| || ||||||||||| ||
seq2  CAGAGCAGACTGGTTCTCAAGGGACCTTGGGAAAC-AATTACTCTTC-TG  495

seq1  ATGATTCTGCAAGTTCTTAATGCCTGAGTTCCTCTGCTTAAAGGGAATTG  549
      |||||||||||||||||| ||| ||| ||| |||||||||||||||  ||
seq2  ATGATTCTGCAAGTTCTT-ATG-CTGGGTT-CTCTGCTTAAAGGGA--TG  540

seq1  TGGGAGAAGGTAAGCTCAAGCTAAGGTAGGGTAAAAAGTTGGAGACCCTG  599
      | || |||||||  ||| |||| | |||||||  || | | |||| ||||
seq2  TTGG-GAAGGTAGCCTC-AGCTTA-GTAGGGT--AACGCTTGAGA-CCTG  584

seq1  GATGGAAGATTATCTTAGCATTTAAGATCTTCATAAGCGAA  640
       |||| |||||  ||  |   ||||||||||| ||||||||
seq2  TATGG-AGATTTACTCTGACATTAAGATCTTC-TAAGCGAA  623