BAC Information

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BAC

Clone NameB6Ng01-130P15
Chromosome1 (Build37)
Map Location 95,159,881 - 95,300,478
singlet/doubletdoublet
Overlap geneSned1, Mterfd2, LOC665966, Pask, Ppp1r7, Tmem16g
Upstream geneLOC100040419, LOC665883, Ndufa10, Olfr1416, Olfr1415, Olfr1414, Olfr1413, Olfr1412, Olfr1411, Olfr1410, Olfr12, Myeov2, Otos, Gpc1, Ankmy1, Dusp28, LOC100040511, Rnpepl1, Capn10, Gpr35, Aqp12, Kif1a, Agxt, 2310007B03Rik, E030010N08Rik
Downstream geneHdlbp, Sept2, Farp2, Stk25, Bok, Thap4, Atg4b, Dtymk, Ing5, D2hgdh, Gal3st2, LOC100041596, EG666009, EG619597, Neu4, Pdcd1, LOC666012
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130P15.bB6Ng01-130P15.g
ACCDH932154DH932155
length1,076368
definitionDH932154|Mus musculus domesticus DNA, BAC clone: B6Ng01-130P15, 5' end.DH932155|Mus musculus domesticus DNA, BAC clone: B6Ng01-130P15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,159,881 - 95,160,894)(95,300,105 - 95,300,478)
sequence
gaattccaggccagccaaggctacatggtacagatgaaagaaaaaaaggt
gaaagcaaatgggcacactaataagataaatgtgaatatttatttttaca
taattaaatcttggcttaatatttaatactataggacatggcattttcaa
cactttttagagttgatgaatattttgattttataagcatcaatgctaag
aatactgcttcacataaatgcatggtacaaaatggcagaagtaggtttag
aaaaaaacatatatacaataagaaaactggtttgtaatatagcatagtct
ggaatctgagctgaggtgcttagagcagtgcccatggtcttggctgacat
gttggcaggagcaatgcatcgtgtgcccactgggttcagaaccaaggtgg
cagcgaagccataagcaactcaatgctcacaaccagaacacaccacactc
attacacatttcaccttgaatttttagctatcgtgcgttcagaagtattt
actggtgcagtatttttcacaataccctattgcagttacacaaccacgcg
ggatttgcaattcacagtttaagaagctacgatttagatttgagtgtgca
aatagcatccatatcgaaacttcagtctagaaaaacaatcctatcaggat
tcatggtcacaaaaagctaagtgttccatttcagtgcatgtacacgtggg
cacacgcatacatgcacacgagtgtgtgtacacacacagacacacacaca
cacgtttgtacttgaggagactgtggttgaatgacaataagaggtttata
taaaggggctggagagatggcttagtggttaagagaactgactgctcttc
tagagggctgaggttcaatttctagcacctacatggcagctcataactgt
ctgggatctgacacttcagacagtcaaaacaccaatggacataaattaaa
ttaaatcatttttaaaagagaagagattcgtgcatacagagagaagattt
atcaaagaatgaaaagagcggtgtagcacccgccttattccaggacttgg
gaggcagagcaggcaattcggttgag
atagataggccttgggtagttaggtatgaaagtaaggggtacaaggggta
agcaaacttcccagggctgtggcctgggccatggtatcatgtctaagagc
caggtgtgcctgataatgaccatgtgaggtaaggtagtggatctggaggg
gtgatctgaccctataataccacaggaatgctgcaagaggaccgagcaaa
gccctgggaaggcagggaccccagcgtttaacctttcaattggcagaaga
gttatgccatggtaggggatgggggatggggaccatatgtcaactgtgaa
gccacttcctcatatcttaagattcaggaaggcatcgtatacagaggacc
cttagcctttggtttagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_95159881_95160894
seq2: B6Ng01-130P15.b_130_1123

seq1  TGAATATTTATTTTTACATAATTAAATCTTGGCTTAATATTTAATACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTATTTTTACATAATTAAATCTTGGCTTAATATTTAATACTAT  50

seq1  AGGACATGGCATTTTCAACACTTTTTAGAGTTGATGAATATTTTGATTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGGCATTTTCAACACTTTTTAGAGTTGATGAATATTTTGATTTT  100

seq1  ATAAGCATCAATGCTAAGAATACTGCTTCACATAAATGCATGGTACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCATCAATGCTAAGAATACTGCTTCACATAAATGCATGGTACAAAA  150

seq1  TGGCAGAAGTAGGTTTAGAAAAAAACATATATACAATAAGAAAACTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGAAGTAGGTTTAGAAAAAAACATATATACAATAAGAAAACTGGTT  200

seq1  TGTAATATAGCATAGTCTGGAATCTGAGCTGAGGTGCTTAGAGCAGTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATAGCATAGTCTGGAATCTGAGCTGAGGTGCTTAGAGCAGTGCC  250

seq1  CATGGTCTTGGCTGACATGTTGGCAGGAGCAATGCATCGTGTGCCCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTCTTGGCTGACATGTTGGCAGGAGCAATGCATCGTGTGCCCACTG  300

seq1  GGTTCAGAACCAAGGTGGCAGCGAAGCCATAAGCAACTCAATGCTCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCAGAACCAAGGTGGCAGCGAAGCCATAAGCAACTCAATGCTCACAA  350

seq1  CCAGAACACACCACACTCATTACACATTTCACCTTGAATTTTTAGCTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAACACACCACACTCATTACACATTTCACCTTGAATTTTTAGCTATC  400

seq1  GTGCGTTCAGAAGTATTTACTGGTGCAGTATTTTTCACAATACCCTATTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTTCAGAAGTATTTACTGGTGCAGTATTTTTCACAATACCCTATTG  450

seq1  CAGTTACACAACCACGCGGGATTTGCAATTCACAGTTTAAGAAGCTACGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTACACAACCACGCGGGATTTGCAATTCACAGTTTAAGAAGCTACGA  500

seq1  TTTAGATTTGAGTGTGCAAATAGCATCCATATCGAAACTTCAGTCTAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATTTGAGTGTGCAAATAGCATCCATATCGAAACTTCAGTCTAGAA  550

seq1  AAACAATCCTATCAGGATTCATGGTCACAAAAAGCTAAGTGTTCCATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATCCTATCAGGATTCATGGTCACAAAAAGCTAAGTGTTCCATTTC  600

seq1  AGTGCATGTACACGTGGGCACACGCATACATGCACACGAGTGTGTGTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGTACACGTGGGCACACGCATACATGCACACGAGTGTGTGTACA  650

seq1  CACACAGACACACACACACACGTTTGTACTTGAGGAGACTGTGGTTGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGACACACACACACACGTTTGTACTTGAGGAGACTGTGGTTGAAT  700

seq1  GACAATAAGAGGTTTATAT-AAGGGGCTGGAGAGATGGCTTAGTGGTTAA  749
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  GACAATAAGAGGTTTATATAAAGGGGCTGGAGAGATGGCTTAGTGGTTAA  750

seq1  GAGAACTGACTGCTCTTCTAGAGGGCTGAGGTTCAATTTCTAGCACCTAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTGACTGCTCTTCTAGAGGGCTGAGGTTCAATTTCTAGCACCTAC  800

seq1  ATGGCAGCTCATAACTGTCTGGGATCTGACAACTTCAGACAGTCAAAAAC  849
      |||||||||||||||||||||||||||||| ||||||||||||| |||||
seq2  ATGGCAGCTCATAACTGTCTGGGATCTGAC-ACTTCAGACAGTC-AAAAC  848

seq1  ACCAATGGACATAAAATAAAATTAAATCATTTTTTAAAAAGAGAAAGAGA  899
      |||||||||||| |||| ||||||||||||||||  ||||||| ||||||
seq2  ACCAATGGACAT-AAATTAAATTAAATCATTTTT--AAAAGAG-AAGAGA  894

seq1  TTCGTGCATACAGAGAAGGAACAAATTTATCAAAGAAATGAAAAGAAGCG  949
      ||||||||||||||||  ||  | ||||||||||| ||||||||| ||||
seq2  TTCGTGCATACAGAGA--GA--AGATTTATCAAAG-AATGAAAAG-AGCG  938

seq1  GTGGTAGCACACGCCTTTAATCCCAGGACTTGGGAGGCAGAGGCAGGCAA  999
      || ||||||| ||||||  || ||||||||||||||||||| ||||||||
seq2  GT-GTAGCACCCGCCTT--ATTCCAGGACTTGGGAGGCAGA-GCAGGCAA  984

seq1  ATTTCGGAGTTTGAG  1014
        |||||   |||||
seq2  --TTCGG---TTGAG  994

seq1: chr1_95300105_95300478
seq2: B6Ng01-130P15.g_69_442 (reverse)

seq1  CCTAAACCAAAGGCTGAGGGTCCTCTGTATACGATGCCTTCCTGAATCTT  50
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCTAAACCAAAGGCTAAGGGTCCTCTGTATACGATGCCTTCCTGAATCTT  50

seq1  AAGATATGAGGAAGTGGCTTCACAGTTGACATATGGTCCCCATCCCCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATGAGGAAGTGGCTTCACAGTTGACATATGGTCCCCATCCCCCAT  100

seq1  CCCCTACCATGGCATAACTCTTCTGCCAATTGAAAGGTTAAACGCTGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTACCATGGCATAACTCTTCTGCCAATTGAAAGGTTAAACGCTGGGG  150

seq1  TCCCTGCCTTCCCAGGGCTTTGCTCGGTCCTCTTGCAGCATTCCTGTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCCTTCCCAGGGCTTTGCTCGGTCCTCTTGCAGCATTCCTGTGGT  200

seq1  ATTATAGGGTCAGATCACCCCTCCAGATCCACTACCTTACCTCACATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGGGTCAGATCACCCCTCCAGATCCACTACCTTACCTCACATGGT  250

seq1  CATTATCAGGCACACCTGGCTCTTAGACATGATACCATGGCCCAGGCCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCAGGCACACCTGGCTCTTAGACATGATACCATGGCCCAGGCCAC  300

seq1  AGCCCTGGGAAGTTTGCTTACCCCTTGTACCCCTTACTTTCATACCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTGGGAAGTTTGCTTACCCCTTGTACCCCTTACTTTCATACCTAAC  350

seq1  TACCCAAGGCCTATCTATGAATTC  374
      ||||||||||||||||||||||||
seq2  TACCCAAGGCCTATCTATGAATTC  374