BAC Information

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BAC

Clone NameB6Ng01-131G20
Chromosome1 (Build37)
Map Location 32,154,362 - 32,268,054
singlet/doubletdoublet
Overlap geneKhdrbs2
Upstream gene4931428L18Rik, LOC666020, Gluld1, 4930521A18Rik, EG226957, EG624262, LOC624275, LOC666056, LOC100041238
Downstream geneEG408191, EG633498, LOC213711, LOC100040828
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131G20.bB6Ng01-131G20.g
ACCDH932486DH932487
length1,1691,047
definitionDH932486|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G20, 5' end.DH932487|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,266,884 - 32,268,054)(32,154,362 - 32,155,409)
sequence
gaattccttagaagagtagctggaaagatcataggagtcagaggggatgg
aagacaccaggagaacaaggcctttgaatcaacaaaacaaggcacaggtg
aactcacagagactggagcatcaagcccatgagctatatggtctgcacca
ggttctatgcatatatattataggttagtattttattgcaactccagtga
gtgagaaaaagtgagtctctgacttttgtgcctgttcttggaacacttcc
ccctgttgtgttgctgaggaaaatttcaatatgagagtttttgcttcatc
atctgatatattattttctcctgtttggttattgtttcttagaagcctgt
tcttttctaataagagacagaaagggagaaagtctagaggagaggggaca
tagagaggaactgtgagggtagaggaaaggggacctaaaatcaggaagta
ctgaatgagaaaacaatctatcttcaataaaaggaaaactaatataatgg
caataataacaatgataacaacaataagaagaagagaaacacgttatggc
aaggatcaatcagaacagtgtttatgctgatctttctaatatcccaccta
tgtttcccgtagtaaataaaaattatgtgtcaatgattacatctttaagg
aattttctaggcatatgataaccatatattctttatatgcatatgcacat
aatacacacattcataggctcttgagagcatttaacccttgatgaaacta
tttgctatttcaaaatgttacatatattaaagctatgccataagctaaga
ttatctttatttgactcatgaaacacttgcataaaatggagaggggatac
acactaaaatctagggttcctgacttctacaaaaaagtcagaaaagggtg
aagagcagagaaccaaggacaggtcaaagataagataaaagaatgcatgg
caagcatgagaatttagggaatttcttgcaagttgcatgtgctagtcaga
tttgaagactgccataagaaaatatatttcctcacgtccctttattcctg
tgaatatctgtattagaaacatcttggccctcctcaccttgtctgctaac
agtcactgttcggtggggtagttctatcctagatataaatggtggaactc
tacccttattcctctgcca
gaattctgggaagagctttccaatcagacaattattttatccatgagaca
aagtagatttaatgaaatataaattaataatatccttatatttatctttt
gcttgatcctagccatttcaaatacaatattaaacttaatttctattttg
atactacagttcctgataaaagaaaatgtgtattctagcctggatgtttt
tagctctatttgggggtgaatgtcattatccttctccttgtttaatggtt
ccaaattaccaccaggtctaattgccacatctactttagagatctcttgc
tatgtactgtttatataaagacaaaatccaaagtctctgggatgtttaat
tttcttcatgtttttttttttttccttcaagacaccacaagtttactgtc
attcatttgacattgggaacaaactgaaaatgagcttaattatatctccc
tacctatcttgttgtaacacaagtaccagagggctgcagtatgacggtgt
taggctcaaagtggagtaatttacccttttcagtctatctcttatgcttc
tttttctatttttattggatattttttatttacatttcaaatgttatccc
ctttccctgttttctcccttgaaagcccctgtactggctagttttgtgtc
aacttgacacagctggagttatcacagagaaaggagcttcagttgaggaa
atgcctccacgagatccagctgtaagtcatttttctcaattagtgatcaa
ggggggaggtccccttgtgggtggtgccatctctgggctggtagtcttgg
ttctataagaaagcaagctgagcaagccagggaaagcaagccagtaagaa
acatccctccatggcctctgcatcagctcctgcttcctgtcctgcttgag
ttccagtcctgacttcctttgtgatgaacagcaatttgggaagttaagct
gaataatccctttcctcctaacttgcttcttagtcataatgttttgtcag
gaatagaaattcttgactaaaacaacccctatcttacccccctccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_32266884_32268054
seq2: B6Ng01-131G20.b_48_1216 (reverse)

seq1  TGGCAGA-GAATAAGGGTAGAGTTTCAAACCATTTAATTATCAAAGATAG  49
      ||||||| |||||||||||||||| |  ||||||||  |||| | |||||
seq2  TGGCAGAGGAATAAGGGTAGAGTTCC--ACCATTTA--TATCTAGGATAG  46

seq1  GAAACTACCC--ACGGACAGTGAACTGTTAGCAGGACATAGTGA-GAGGG  96
        ||||||||   || |||||| |||||||||| ||||  |||| |||||
seq2  --AACTACCCCACCGAACAGTG-ACTGTTAGCA-GACAAGGTGAGGAGGG  92

seq1  CAAAGATGTTTCTAATACAGATA-TCACAGGAATAAAGGGACGTGAGGAA  145
      | ||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CCAAGATGTTTCTAATACAGATATTCACAGGAATAAAGGGACGTGAGGAA  142

seq1  ATATATTTTC-TATGGCAGTCTTCAAATCTGACTAGCACATGCAACTTGC  194
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTTCTTATGGCAGTCTTCAAATCTGACTAGCACATGCAACTTGC  192

seq1  AAGAAATTCCCTAAATTCTCATGCTTGCCATGCATTCTTTTATCTTATCT  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAATTCCCTAAATTCTCATGCTTGCCATGCATTCTTTTATCTTATCT  242

seq1  TTGACCTGTCCTTGGTTCTCTGCTCTTCACCCTTTTCTGACTTTTTTGTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTGTCCTTGGTTCTCTGCTCTTCACCCTTTTCTGACTTTTTTGTA  292

seq1  GAAGTCAGGAACCCTAGATTTTAGTGTGTATCCCCTCTCCATTTTATGCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCAGGAACCCTAGATTTTAGTGTGTATCCCCTCTCCATTTTATGCA  342

seq1  AGTGTTTCATGAGTCAAATAAAGATAATCTTAGCTTATGGCATAGCTTTA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTTTCATGAGTCAAATAAAGATAATCTTAGCTTATGGCATAGCTTTA  392

seq1  ATATATGTAACATTTTGAAATAGCAAATAGTTTCATCAAGGGTTAAATGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGTAACATTTTGAAATAGCAAATAGTTTCATCAAGGGTTAAATGC  442

seq1  TCTCAAGAGCCTATGAATGTGTGTATTATGTGCATATGCATATAAAGAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGAGCCTATGAATGTGTGTATTATGTGCATATGCATATAAAGAAT  492

seq1  ATATGGTTATCATATGCCTAGAAAATTCCTTAAAGATGTAATCATTGACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTTATCATATGCCTAGAAAATTCCTTAAAGATGTAATCATTGACA  542

seq1  CATAATTTTTATTTACTACGGGAAACATAGGTGGGATATTAGAAAGATCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTTTTATTTACTACGGGAAACATAGGTGGGATATTAGAAAGATCA  592

seq1  GCATAAACACTGTTCTGATTGATCCTTGCCATAACGTGTTTCTCTTCTTC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAACACTGTTCTGATTGATCCTTGCCATAACGTGTTTCTCTTCTTC  642

seq1  TTATTGTTGTTATCATTGTTATTATTGCCATTATATTAGTTTTCCTTTTA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTGTTATCATTGTTATTATTGCCATTATATTAGTTTTCCTTTTA  692

seq1  TTGAAGATAGATTGTTTTCTCATTCAGTACTTCCTGATTTTAGGTCCCCT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGATAGATTGTTTTCTCATTCAGTACTTCCTGATTTTAGGTCCCCT  742

seq1  TTCCTCTACCCTCACAGTTCCTCTCTATGTCCCCTCTCCTCTAGACTTTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTACCCTCACAGTTCCTCTCTATGTCCCCTCTCCTCTAGACTTTC  792

seq1  TCCCTTTCTGTCTCTTATTAGAAAAGAACAGGCTTCTAAGAAACAATAAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTCTGTCTCTTATTAGAAAAGAACAGGCTTCTAAGAAACAATAAC  842

seq1  CAAACAGGAGAAAATAATATATCAGATGATGAAGCAAAAACTCTCATATT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGGAGAAAATAATATATCAGATGATGAAGCAAAAACTCTCATATT  892

seq1  GAAATTTTCCTCAGCAACACAACAGGGGGAAGTGTTCCAAGAACAGGCAC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTTCCTCAGCAACACAACAGGGGGAAGTGTTCCAAGAACAGGCAC  942

seq1  AAAAGTCAGAGACTCACTTTTTCTCACTCACTGGAGTTGCAATAAAATAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCAGAGACTCACTTTTTCTCACTCACTGGAGTTGCAATAAAATAC  992

seq1  TAACCTATAATATATATGCATAGAACCTGGTGCAGACCATATAGCTCATG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTATAATATATATGCATAGAACCTGGTGCAGACCATATAGCTCATG  1042

seq1  GGCTTGATGCTCCAGTCTCTGTGAGTTCACCTGTGCCTTGTTTTGTTGAT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGATGCTCCAGTCTCTGTGAGTTCACCTGTGCCTTGTTTTGTTGAT  1092

seq1  TCAAAGGCCTTGTTCTCCTGGTGTCTTCCATCCCCTCTGACTCCTATGAT  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGCCTTGTTCTCCTGGTGTCTTCCATCCCCTCTGACTCCTATGAT  1142

seq1  CTTTCCAGCTACTCTTCTAAGGAATTC  1171
      |||||||||||||||||||||||||||
seq2  CTTTCCAGCTACTCTTCTAAGGAATTC  1169

seq1: chr1_32154362_32155409
seq2: B6Ng01-131G20.g_67_1113

seq1  GAATTCTGGGAAGAGCTTTCCAATCAGACAATTATTTTATCCATGAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGAGCTTTCCAATCAGACAATTATTTTATCCATGAGACA  50

seq1  AAGTAGATTTAATGAAATATAAATTAATAATATCCTTATATTTATCTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGATTTAATGAAATATAAATTAATAATATCCTTATATTTATCTTTT  100

seq1  GCTTGATCCTAGCCATTTCAAATACAATATTAAACTTAATTTCTATTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGATCCTAGCCATTTCAAATACAATATTAAACTTAATTTCTATTTTG  150

seq1  ATACTACAGTTCCTGATAAAAGAAAATGTGTATTCTAGCCTGGATGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTACAGTTCCTGATAAAAGAAAATGTGTATTCTAGCCTGGATGTTTT  200

seq1  TAGCTCTATTTGGGGGTGAATGTCATTATCCTTCTCCTTGTTTAATGGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCTATTTGGGGGTGAATGTCATTATCCTTCTCCTTGTTTAATGGTT  250

seq1  CCAAATTACCACCAGGTCTAATTGCCACATCTACTTTAGAGATCTCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTACCACCAGGTCTAATTGCCACATCTACTTTAGAGATCTCTTGC  300

seq1  TATGTACTGTTTATATAAAGACAAAATCCAAAGTCTCTGGGATGTTTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTACTGTTTATATAAAGACAAAATCCAAAGTCTCTGGGATGTTTAAT  350

seq1  TTTCTTCATGTTTTTTTTTTTTTCCTTCAAGACACCACAAGTTTACTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCATGTTTTTTTTTTTTTCCTTCAAGACACCACAAGTTTACTGTC  400

seq1  ATTCATTTGACATTGGGAACAAACTGAAAATGAGCTTAATTATATCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTGACATTGGGAACAAACTGAAAATGAGCTTAATTATATCTCCC  450

seq1  TACCTATCTTGTTGTAACACAAGTACCAGAGGGCTGCAGTATGACGGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATCTTGTTGTAACACAAGTACCAGAGGGCTGCAGTATGACGGTGT  500

seq1  TAGGCTCAAAGTGGAGTAATTTACCCTTTTCAGTCTATCTCTTATGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTCAAAGTGGAGTAATTTACCCTTTTCAGTCTATCTCTTATGCTTC  550

seq1  TTTTTCTATTTTTATTGGATATTTTTTATTTACATTTCAAATGTTATCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTATTTTTATTGGATATTTTTTATTTACATTTCAAATGTTATCCC  600

seq1  CTTTCCCTGTTTTCTCCCTTGAAAGCCCCTGTACTGGCTAGTTTTGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCTGTTTTCTCCCTTGAAAGCCCCTGTACTGGCTAGTTTTGTGTC  650

seq1  AACTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGACACAGCTGGAGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAA  700

seq1  ATGCCTCCACGAGATCCAGCTGTAAGTCA-TTTTCTCAATTAGTGATCAA  749
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  ATGCCTCCACGAGATCCAGCTGTAAGTCATTTTTCTCAATTAGTGATCAA  750

seq1  GGGGGGAGGTCCCCTTGTGGGTGGTGCCATCTCTGGGCTGGTAGTCTTGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGAGGTCCCCTTGTGGGTGGTGCCATCTCTGGGCTGGTAGTCTTGG  800

seq1  TTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGAAAGCAAGCCAGTAAGAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATAAGAAAGCAAGCTGAGCAAGCCAGGGAAAGCAAGCCAGTAAGAA  850

seq1  ACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGTCCTGCTTGAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCTCCATGGCCTCTGCATCAGCTCCTGCTTCCTGTCCTGCTTGAG  900

seq1  TTCCAGTCCTGACTTCCTTTGGTGATGAACAGCAATTT-GGAAGTGTAAG  948
      |||||||||||||||||||| ||||||||||||||||| |||||| ||||
seq2  TTCCAGTCCTGACTTCCTTT-GTGATGAACAGCAATTTGGGAAGT-TAAG  948

seq1  CTGAATAATCCCTTTCCTCCCTAACTTGCTTCTTAGTCATAATGTTTTGT  998
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CTGAATAATCCCTTTCCT-CCTAACTTGCTTCTTAGTCATAATGTTTTGT  997

seq1  CCAGGAATAGAAA-TCCTGACTAAGACAACCCCTATCCTACCCCCCTCCC  1047
       |||||||||||| || ||||||| |||||||||||| ||||||||||||
seq2  -CAGGAATAGAAATTCTTGACTAAAACAACCCCTATCTTACCCCCCTCCC  1046

seq1  T  1048
      |
seq2  T  1047