BAC Information

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BAC

Clone NameB6Ng01-131L07
Chromosome1 (Build37)
Map Location 126,848,177 - 126,997,287
singlet/doubletdoublet
Overlap genenone
Upstream geneDpp10, LOC666998
Downstream geneActr3, Slc35f5, Lypd1, E030049G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131L07.bB6Ng01-131L07.g
ACCDH932694DH932695
length845443
definitionDH932694|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L07, 5' end.DH932695|Mus musculus domesticus DNA, BAC clone: B6Ng01-131L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,848,177 - 126,849,017)(126,996,839 - 126,997,287)
sequence
gaattcagtgattatccatcttctgttagagtttctcctttactggaagg
ttgctaactaggcaaggttggctggtctggaagtccccatgacccatctg
tctcaaactccccagtgcttaatttagaagcagaaaccaacatggttggc
tttttttttttttaaggtgagttctggggatcaaactttggtcctcatac
tttcaaggtagtgctttattaacctgattatctccctagagtctttcata
atcatttttgtttaccttttatcagtgatcttcatccataacgctgcaat
gacagcagtaactgattattctttgctaaatcaaactctttctgtaaata
catcacaaattgccatttgaatgacagtggacatgatggcctctttaaat
attgtacttctataaacatctcagcatacatcttcttggatgctgctttt
gttgagtatatttcctagaatcaatagaggtattagattattgagttgtg
attttggcaaaccttataatgcatttcctaaaatgacctctgtaggtgga
gcatcattttttaaatccacataatagacctctctacttctattcctgtc
actcatgtttaagacctctctggtgctaatcttcatttggtgttctaagt
ttgctttatgggtttttggtttggtttggggaggatgttggtttcttatg
agagaacatcattaatttctaacttgcctaccttgatgttctttactcaa
actacagaatctttagaggagtctgatattgattctttggcattaatgtt
tggagagtatgttcctgtttatttgtccttggttcatgagtgtgt
aattccttacagctatagactgccatctccatcaaaggctagctgctagc
tctctgactttagaaataaccctgctcctttcgagtgaatggatcccaca
cagggtaatcacatttggattagctcaagtttaaagactaattattcctg
aaaaattcctggtcatatattgcaacattgccgtagagagatgtgccatc
ctagtcatgggtccttctcaaacatgagagatggagtttacagaagatat
gccaagagatgatagtaactttgggtctcgttttagatttttactatgaa
atttatgaacatagaatgctcctgggaatctgatagccctgggtcaactc
ctatcctccactcccacccccaccccacccccacccccacccccaccccc
atcaccctctctctctctctctctctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_126848177_126849017
seq2: B6Ng01-131L07.b_45_888

seq1  GAATTCAGTGATTATCCATCTTCTGTTAGAGTTTCTCCTTTACTGGAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGATTATCCATCTTCTGTTAGAGTTTCTCCTTTACTGGAAGG  50

seq1  TTGCTAACTAGGCAAGGTTGGCTGGTCTGGAAGTCCCCATGACCCATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAACTAGGCAAGGTTGGCTGGTCTGGAAGTCCCCATGACCCATCTG  100

seq1  TCTCAAACTCCCCAGTGCTTAATTTAGAAGCAGAAACCAACATGGTTGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAACTCCCCAGTGCTTAATTTAGAAGCAGAAACCAACATGGTTGGC  150

seq1  TTTTTTTTTTTTTAAGGTGAGTTCTGGGGATCAAACTTTGGTCCTCATAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTAAGGTGAGTTCTGGGGATCAAACTTTGGTCCTCATAC  200

seq1  TTTCAAGGTAGTGCTTTATTAACCTGATTATCTCCCTAGAGTCTTTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGTAGTGCTTTATTAACCTGATTATCTCCCTAGAGTCTTTCATA  250

seq1  ATCATTTTTGTTTACCTTTTATCAGTGATCTTCATCCATAACGCTGCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTTTGTTTACCTTTTATCAGTGATCTTCATCCATAACGCTGCAAT  300

seq1  GACAGCAGTAACTGATTATTCTTTGCTAAATCAAACTCTTTCTGTAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAGTAACTGATTATTCTTTGCTAAATCAAACTCTTTCTGTAAATA  350

seq1  CATCACAAATTGCCATTTGAATGACAGTGGACATGATGGCCTCTTTAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACAAATTGCCATTTGAATGACAGTGGACATGATGGCCTCTTTAAAT  400

seq1  ATTGTACTTCTATAAACATCTCAGCATACATCTTCTTGGATGCTGCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTACTTCTATAAACATCTCAGCATACATCTTCTTGGATGCTGCTTTT  450

seq1  GTTGAGTATATTTCCTAGAATCAATAGAGGTATTAGATTATTGAGTTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGTATATTTCCTAGAATCAATAGAGGTATTAGATTATTGAGTTGTG  500

seq1  ATTTTGGCAAACCTTATAATGCATTTCCTAAAATGACCTCTGTAGGTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGCAAACCTTATAATGCATTTCCTAAAATGACCTCTGTAGGTGGA  550

seq1  GCATCATTTTTTAAATCCACATAATAGACCTCTCTACTTCTATTCCTGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTTTTTAAATCCACATAATAGACCTCTCTACTTCTATTCCTGTC  600

seq1  ACTCATGTTTAAGACCTCTCTGGTGCTAATCTTCATTTGGTGTTCTAAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGTTTAAGACCTCTCTGGTGCTAATCTTCATTTGGTGTTCTAAGT  650

seq1  TTGCTTTATGGGTTTTTGGTTTGGTTTGGGGAGGATGTTGGTTTCTTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTATGGGTTTTTGGTTTGGTTTGGGGAGGATGTTGGTTTCTTATG  700

seq1  AGAGAACATCATTAA-TTCTAACTTGCCTACCTTGATGTTCTTTACTCAA  749
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGAGAACATCATTAATTTCTAACTTGCCTACCTTGATGTTCTTTACTCAA  750

seq1  ACTACAGAATCTTTAGAGGAGTCTGATATTGATTCTTTGGCA-TAATGTT  798
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTACAGAATCTTTAGAGGAGTCTGATATTGATTCTTTGGCATTAATGTT  800

seq1  TGTAGAGTATGTACCTGTTTATGTGT-CTTGGTTCATGAGTGTG  841
      || ||||||||| ||||||||| ||| |||||||||||||||||
seq2  TGGAGAGTATGTTCCTGTTTATTTGTCCTTGGTTCATGAGTGTG  844

seq1: chr1_126996839_126997287
seq2: B6Ng01-131L07.g_68_516 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGTGATGGGGGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGTGATGGGGGTG  50

seq1  GGGGTGGGGGTGGGGGTGGGGTGGGGGTGGGAGTGGAGGATAGGAGTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGTGGGGGTGGGGTGGGGGTGGGAGTGGAGGATAGGAGTTGA  100

seq1  CCCAGGGCTATCAGATTCCCAGGAGCATTCTATGTTCATAAATTTCATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGGCTATCAGATTCCCAGGAGCATTCTATGTTCATAAATTTCATAG  150

seq1  TAAAAATCTAAAACGAGACCCAAAGTTACTATCATCTCTTGGCATATCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATCTAAAACGAGACCCAAAGTTACTATCATCTCTTGGCATATCTT  200

seq1  CTGTAAACTCCATCTCTCATGTTTGAGAAGGACCCATGACTAGGATGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAACTCCATCTCTCATGTTTGAGAAGGACCCATGACTAGGATGGCA  250

seq1  CATCTCTCTACGGCAATGTTGCAATATATGACCAGGAATTTTTCAGGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTCTACGGCAATGTTGCAATATATGACCAGGAATTTTTCAGGAAT  300

seq1  AATTAGTCTTTAAACTTGAGCTAATCCAAATGTGATTACCCTGTGTGGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTCTTTAAACTTGAGCTAATCCAAATGTGATTACCCTGTGTGGGA  350

seq1  TCCATTCACTCGAAAGGAGCAGGGTTATTTCTAAAGTCAGAGAGCTAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCACTCGAAAGGAGCAGGGTTATTTCTAAAGTCAGAGAGCTAGCA  400

seq1  GCTAGCCTTTGATGGAGATGGCAGTCTATAGCTGTAAGGAATTGAATTC  449
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCCTTTGATGGAGATGGCAGTCTATAGCTGTAAGGAATTGAATTC  449