BAC Information

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BAC

Clone NameB6Ng01-132F23
Chromosome1 (Build37)
Map Location 147,061,544 - 147,209,514
singlet/doubletdoublet
Overlap genenone
Upstream geneRbm6-ps2, Rgs1, EG639456, Rgs21, Rgs18, LOC667877, LOC625057, LOC383570
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132F23.bB6Ng01-132F23.g
ACCDH933190DH933191
length1,1751,072
definitionDH933190|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F23, 5' end.DH933191|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,061,544 - 147,062,736)(147,208,440 - 147,209,514)
sequence
gaattcaaactttgcatcagcagaggcatggcaatatcaacagaaaaacc
aattaagaatttatgcaaggaactagtcttaggtaagacttagcatacct
caagcaaatagtccctattttaccttttactttttaaaaataaccttttt
gtaagaaaagtctttgtgatcatctcacatcttatactctattttttttc
tcctttgtcctcagagatgtttagagaggaatccttgcttgcttgtcata
tgcaatcaaacgatcagtctttcccctgagaacagaatcagtaacaattt
cattttaagaaacatagaaagatctaagttgagtattgtgactcatgaac
cctttaagaagggcttcaaatcccatattactgtccctgaatccccaaaa
tagaaatttctagcttaaggccgctgagattgtaacagagtttcagtggt
tcttcacaataagattcaaagtggagcaaatcaaaggtcaagccaagcaa
acctcagcagcttcaagtcaagcaacagagcagtccacattccaaagcaa
gaacagaaaagcccaacaggggtgatcaacatacagaaagaaaacttaag
gggcagccttgatgaatcagaatgtattcatctttgtcaaaatttagaga
taagaaataatgatctcctatccagactgaatagacatggaactattcat
gattttcacatgagatttttgaaaagaataggactccaaagcagactagg
agattgttttggggaagttacaatgagaaaagtttggggttagggtaagg
attccaatacctagaaaggacttgtatggttaaaatgccaccagaattca
gtaaagaacatccagggttttatcccttattttttcccagaagtcacagg
gtagaggagaaaaagtgagtcttcaaaccggaagcagtcaagtataaata
agtgcagtcacatttcagatttggaaaagattaaatcagagtaatataca
tgtgtgatgaagttggagaaatgaatgcagactgacagtccatgaattta
gcagttatatgcagtcatgcccatctgactcggatttagtatttacttga
cttaggtaaatccgctctttgatccttagctgattcttgtctgttcacgc
ttggccttttgaggtaataggccaa
gaattcaacataaatttgtttctgcgttcttggaatgcattggttgttcc
ttggtgagtcaagagatgatagttaacaaacactaaatttaaaatatact
aaaatgagaaagacaaaggaaattagttctagtattttataatactagaa
cattttatatttgcatgttatatacatgaattcaaatgagatgatttttc
acgtattttaatatatcctccaaacgatgacatttaagctcagaaagaca
tagtttatttatatcaagaagaagatttaaatgttccaagtttgtttcaa
tctttatctagttctcaagaacaaggataatgcatgagtttaagttggga
atgatagttgccgttttggaattatgatactgttggtgacacatggagat
taagttgaacggaaggggctattttcagagctcttttctgtgaagcacta
gttctgggagatgttcaagtgtgtgtataagttttttgggagtgaaatgt
ggttagggaaccctgctcacacaaacctctttagggggtcacagtgctca
ttatcatcagttttgaggctctcggtgaacctgcaagctcttctaaagtg
acatgacaatataatcctttatcagaggaatagctgtcaggctccttcag
atgcaatccaatgccacaagatattactgtttcagaaattctgtcctatt
gcttaagtgtctttaacaagaatgaaaattaacattggatgctgagtgaa
tttcgaaatgactgactctagtccacatactatataaataactatttaag
tatcatcttaaaatcactgaaggctcattgtgctcttgatatttccatgt
ctttttattaatcaggatgtgcaataaatataagtcatacttatatagct
tctcattacatattctagaatcaagtaaatcaggaattctacagtgatac
ctggaaatgcccgttattattattttcccaaatatccatgttgcaacttt
actctaaaaaaattattctttgaattaagccatttgaaagatagcctatg
tccttaaagaatgccttgttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_147061544_147062736
seq2: B6Ng01-132F23.b_45_1219

seq1  GAATTCAAACTTTGCATCAGCAGAGGCATGGCAATATCAACAGAAAAACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTTTGCATCAGCAGAGGCATGGCAATATCAACAGAAAAACC  50

seq1  AATTAAGAATTTATGCAAGGAACTAGTCTTAGGTAAGACTTAGCATACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGAATTTATGCAAGGAACTAGTCTTAGGTAAGACTTAGCATACCT  100

seq1  CAAGCAAATAGTCCCTATTTTACCTTTTACTTTTTAAAAATAACCTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAAATAGTCCCTATTTTACCTTTTACTTTTTAAAAATAACCTTTTT  150

seq1  GTAAGAAAAGTCTTTGTGATCATCTCACATCTTATACTCTATTTTTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAAAGTCTTTGTGATCATCTCACATCTTATACTCTATTTTTTTTC  200

seq1  TCCTTTGTCCTCAGAGATGTTTAGAGAGGAATCCTTGCTTGCTTGTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTGTCCTCAGAGATGTTTAGAGAGGAATCCTTGCTTGCTTGTCATA  250

seq1  TGCAATCAAACGATCAGTCTTTCCCCTGAGAACAGAATCAGTAACAATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATCAAACGATCAGTCTTTCCCCTGAGAACAGAATCAGTAACAATTT  300

seq1  CATTTTAAGAAACATAGAAAGATCTAAGTTGAGTATTGTGACTCATGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAGAAACATAGAAAGATCTAAGTTGAGTATTGTGACTCATGAAC  350

seq1  CCTTTAAGAAGGGCTTCAAATCCCATATTACTGTCCCTGAATCCCCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTAAGAAGGGCTTCAAATCCCATATTACTGTCCCTGAATCCCCAAAA  400

seq1  TAGAAATTTCTAGCTTAAGGCCGCTGAGATTGTAACAGAGTTTCAGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATTTCTAGCTTAAGGCCGCTGAGATTGTAACAGAGTTTCAGTGGT  450

seq1  TCTTCACAATAAGATTCAAAGTGGAGCAAATCAAAGGTCAAGCCAAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACAATAAGATTCAAAGTGGAGCAAATCAAAGGTCAAGCCAAGCAA  500

seq1  ACCTCAGCAGCTTCAAGTCAAGCAACAGAGCAGTCCACATTCCAAAGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGCAGCTTCAAGTCAAGCAACAGAGCAGTCCACATTCCAAAGCAA  550

seq1  GAACAGAAAAGCCCAACAGGGGTGATCAACATACAGAAAGAAAACTTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAAAAGCCCAACAGGGGTGATCAACATACAGAAAGAAAACTTAAG  600

seq1  GGGCAGCCTTGATGAATCAGAATGTATTCATCTTTGTCAAAATTTAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGCCTTGATGAATCAGAATGTATTCATCTTTGTCAAAATTTAGAGA  650

seq1  TAAGAAATAATGATCTCCTATCCAGACTGAATAGACATGGAACTATTCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAAATAATGATCTCCTATCCAGACTGAATAGACATGGAACTATTCAT  700

seq1  GATTTTCACATGAGATTTTTGAAAAGAATAGGACTCCAAAGCAGACTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCACATGAGATTTTTGAAAAGAATAGGACTCCAAAGCAGACTAGG  750

seq1  AGATTGTTTTGGGGAAGTTACAATGAGAAAAGTTTGGGGTTAGGGTAAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTTTTGGGGAAGTTACAATGAGAAAAGTTTGGGGTTAGGGTAAGG  800

seq1  ATTCCAATACCTAGAAAGGACTTGTATGGTTAAAATGCCACCAGAATTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAATACCTAGAAAGGACTTGTATGGTTAAAATGCCACCAGAATTCA  850

seq1  GTAAAGAACATCCAGGGTTTTATCCCTTATTTTTTCCCAGAAAGTCACAG  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GTAAAGAACATCCAGGGTTTTATCCCTTATTTTTTCCCAG-AAGTCACAG  899

seq1  GGTAGAGGAGAAAAAGTGAGTCTTCAAACCGGAAGCAGTCAAGTATAAAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGAGGAGAAAAAGTGAGTCTTCAAACCGGAAGCAGTCAAGTATAAAT  949

seq1  AAGTGCAGTCACATTTCAGATTTGGAAAAGGATTAAATCAAGAGTAATTA  1000
      ||||||||||||||||||||||||||||| ||||||||| ||||||||  
seq2  AAGTGCAGTCACATTTCAGATTTGGAAAA-GATTAAATC-AGAGTAAT--  995

seq1  TTACAAGGTGTGAATGAAGTTGGAGAAATGAATGCAGGACTGACAAGTCC  1050
       ||| | ||||| ||||||||||||||||||||||| ||||||| |||||
seq2  ATAC-ATGTGTG-ATGAAGTTGGAGAAATGAATGCA-GACTGAC-AGTCC  1041

seq1  ATGGATTTTAGCAGTTTATATGCAGTCATTGCCACATCTGACCCCGAGTT  1100
      || || |||||||| ||||||||||||| |||| |||||||| | || ||
seq2  AT-GAATTTAGCAG-TTATATGCAGTCA-TGCC-CATCTGACTCGGA-TT  1086

seq1  TAGTATTTACTTGACTAAAGGGAAAATCCGCTCTTTGAAACTCTAGCTGA  1150
      |||||||||||||||| |  || |||||||||||||||  || |||||||
seq2  TAGTATTTACTTGACTTA--GGTAAATCCGCTCTTTGATCCT-TAGCTGA  1133

seq1  CTCCTGTGCTGTCCACCGCATG--CTTTTGAGGTAATAAGGCCAA  1193
       || ||| |||| || ||| ||  ||||||||||||| |||||||
seq2  TTCTTGT-CTGTTCA-CGCTTGGCCTTTTGAGGTAAT-AGGCCAA  1175

seq1: chr1_147208440_147209514
seq2: B6Ng01-132F23.g_67_1138 (reverse)

seq1  TCAACAGGCCATTCTTTAATGACATA-GCTATCTTTCAAATGTGCCTAAA  49
      |||||| | |||||||||| |||||| ||||||||||||||| || ||| 
seq2  TCAACAAGGCATTCTTTAAGGACATAGGCTATCTTTCAAATG-GCTTAAT  49

seq1  TCTAAGTAATATTATTTTATGTGTTAAGGTTGCAACAATGAATATTTGGG  99
      || ||| |||| | ||||  | | ||| |||||||| ||| |||||||||
seq2  TCAAAG-AATAATTTTTTTAGAG-TAAAGTTGCAAC-ATGGATATTTGGG  96

seq1  AAAAATATAAATAACGGGGCATTTCCAGGTATCACTGTAGAATTCCTGAT  149
       ||||||  |||||| ||||||||||||||||||||||||||||||||||
seq2  -AAAATAATAATAAC-GGGCATTTCCAGGTATCACTGTAGAATTCCTGAT  144

seq1  TTACTTGATTCTAGAATATGTAATGAGTAGCTATATAAGTATGACTTATA  199
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTACTTGATTCTAGAATATGTAATGAGAAGCTATATAAGTATGACTTATA  194

seq1  TTTATTGCACATCCTGATTAAT-AAAAGACATGGAAATATCAAGAGCACA  248
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTTATTGCACATCCTGATTAATAAAAAGACATGGAAATATCAAGAGCACA  244

seq1  ATGAGCCTTCAGTGATTTTAAGATGATACTT-AATAGTTATTTATATAGT  297
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ATGAGCCTTCAGTGATTTTAAGATGATACTTAAATAGTTATTTATATAGT  294

seq1  ATGTGGACTAGAGTCAGTCATTTCGAAATTCACTCAGCATCCAATGTTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGACTAGAGTCAGTCATTTCGAAATTCACTCAGCATCCAATGTTAA  344

seq1  TTTTCATTCTTGTTAAAGACACTTAAGCAATAGGACAGAATTTCTGAAAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATTCTTGTTAAAGACACTTAAGCAATAGGACAGAATTTCTGAAAC  394

seq1  AGTAATATCTTGTGGCATTGGATTGCATCTGAAGGAGCCTGACAGCTATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATCTTGTGGCATTGGATTGCATCTGAAGGAGCCTGACAGCTATT  444

seq1  CCTCTGATAAAGGATTATATTGTCATGTCACTTTAGAAGAGCTTGCAGGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGATAAAGGATTATATTGTCATGTCACTTTAGAAGAGCTTGCAGGT  494

seq1  TCACCGAGAGCCTCAAAACTGATGATAATGAGCACTGTGACCCCCTAAAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCGAGAGCCTCAAAACTGATGATAATGAGCACTGTGACCCCCTAAAG  544

seq1  AGGTTTGTGTGAGCAGGGTTCCCTAACCACATTTCACTCCCAAAAAACTT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGTGTGAGCAGGGTTCCCTAACCACATTTCACTCCCAAAAAACTT  594

seq1  ATACACACACTTGAACATCTCCCAGAACTAGTGCTTCACAGAAAAGAGCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACACACTTGAACATCTCCCAGAACTAGTGCTTCACAGAAAAGAGCT  644

seq1  CTGAAAATAGCCCCTTCCGTTCAACTTAATCTCCATGTGTCACCAACAGT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATAGCCCCTTCCGTTCAACTTAATCTCCATGTGTCACCAACAGT  694

seq1  ATCATAATTCCAAAACGGCAACTATCATTCCCAACTTAAACTCATGCATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATTCCAAAACGGCAACTATCATTCCCAACTTAAACTCATGCATT  744

seq1  ATCCTTGTTCTTGAGAACTAGATAAAGATTGAAACAAACTTGGAACATTT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTGTTCTTGAGAACTAGATAAAGATTGAAACAAACTTGGAACATTT  794

seq1  AAATCTTCTTCTTGATATAAATAAACTATGTCTTTCTGAGCTTAAATGTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTCTTCTTGATATAAATAAACTATGTCTTTCTGAGCTTAAATGTC  844

seq1  ATCGTTTGGAGGATATATTAAAATACGTGAAAAATCATCTCATTTGAATT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGTTTGGAGGATATATTAAAATACGTGAAAAATCATCTCATTTGAATT  894

seq1  CATGTATATAACATGCAAATATAAAATGTTCTAGTATTATAAAATACTAG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATAACATGCAAATATAAAATGTTCTAGTATTATAAAATACTAG  944

seq1  AACTAATTTCCTTTGTCTTTCTCATTTTAGTATATTTTAAATTTAGTGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAATTTCCTTTGTCTTTCTCATTTTAGTATATTTTAAATTTAGTGTT  994

seq1  TGTTAACTATCATCTCTTGACTCACCAAGGAACAACCAATGCATTCCAAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACTATCATCTCTTGACTCACCAAGGAACAACCAATGCATTCCAAG  1044

seq1  AACGCAGAAACAAATTTATGTTGAATTC  1075
      ||||||||||||||||||||||||||||
seq2  AACGCAGAAACAAATTTATGTTGAATTC  1072