BAC Information

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BAC

Clone NameB6Ng01-132I19
Chromosome1 (Build37)
Map Location 15,255,371 - 15,256,013
singlet/doubletsinglet
Overlap genenone
Upstream geneEya1, LOC665391, Msc, Smt3h2-ps4, EG665407, Trpa1, EG269105, LOC100039949
Downstream geneLOC100039959, Kcnb2, Ppia-ps1_109.1, Terf1, Gm106, LOC665434, 4930444P10Rik, Rpl7, Rdh10, EG665282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132I19.bB6Ng01-132I19.g
ACCDH933324DH933325
length1,0101,153
definitionDH933324|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I19, 5' end.DH933325|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttaaatcagaatctagaaccttcataagaatccatctggaacc
tacaatgccaaccaaaaggtagctccagatgggaaaatgcccaaagagtt
caagacttagaatggcagaatatgctgagtaaagagtgcacaccatgtcc
gatgccaacgtagagcaatgtcagagaacaccttatgggttttatctttt
agagtttgaaaattttaaacgtgcacatgcgtgaatgcatcctacagttg
acgaatactcagaattccaaggggcttctgctgtaagctctgaaaagaat
gattctgagattgcatgtttattagagatggtggttatcttggagatatc
tcttcaaattaaaactgatgatgctcccacatgtgtattcactggaattc
aacaattttttttagacattatggcataacaatgttacaggtagatatta
taataccgcaagacaagtaattacatagagatcttaaatgcactttaaaa
gaaatacttaacaaagacaatggggtgacaaagaccccctgagatagatt
acatagtgctttattaactttaaattttttgaatgctgatgaacaaaaac
aacagctgttgaaagacagtgtatggaaatacagtaagagacattgtatt
gttaccaaaaaaaaaaaaaaaacaaaaaacaaaaaacaaaacaaaaaaca
aacaaaaaaaacctgttgaattagatcaacctatttgtattaaggtcgtc
cttacttcagaatggaaggaaagaaatgtattatgttggggaagaggttt
tatctttgtttcaacaggagaagaaaagttatggattctatccagattaa
taaaaagatctggacagggggagacccccgaagacattgcctgcagacaa
gaagaataaatcaagaaggccaagaaaaccagtatcatggatcgctgatc
tgtcctcatgggaaaatctctgagactggctgagacatgaaaagatctca
gcaggacttc
gaattctcacctgaggaataccgaatggcagagaagtacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaagaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaattcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgctggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tggagagctagagaaagtagccaagagctaaagggatctgcaccctatag
gtggaacaacatatgactacagtacccggagctctgactctagctgctta
tatatcaaagatgctagtcggcatcactgtaaggaaggtcatgactgcac
ctttaatgcccagacaggtaactcaggacaaaaggggatggttggttagg
aag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_15255371_15256013
seq2: B6Ng01-132I19.b_47_689 (reverse)

seq1  TGTCTCTTACTGTATTTCCATACACTGTCTTTCAACAGCTGTTGTTTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTACTGTATTTCCATACACTGTCTTTCAACAGCTGTTGTTTTTG  50

seq1  TTCATCAGCATTCAAAAAATTTAAAGTTAATAAAGCACTATGTAATCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAGCATTCAAAAAATTTAAAGTTAATAAAGCACTATGTAATCTAT  100

seq1  CTCAGGGGGTCTTTGTCACCCCATTGTCTTTGTTAAGTATTTCTTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGGGTCTTTGTCACCCCATTGTCTTTGTTAAGTATTTCTTTTAAA  150

seq1  GTGCATTTAAGATCTCTATGTAATTACTTGTCTTGCGGTATTATAATATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATTTAAGATCTCTATGTAATTACTTGTCTTGCGGTATTATAATATC  200

seq1  TACCTGTAACATTGTTATGCCATAATGTCTAAAAAAAATTGTTGAATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTAACATTGTTATGCCATAATGTCTAAAAAAAATTGTTGAATTCC  250

seq1  AGTGAATACACATGTGGGAGCATCATCAGTTTTAATTTGAAGAGATATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATACACATGTGGGAGCATCATCAGTTTTAATTTGAAGAGATATCT  300

seq1  CCAAGATAACCACCATCTCTAATAAACATGCAATCTCAGAATCATTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGATAACCACCATCTCTAATAAACATGCAATCTCAGAATCATTCTTT  350

seq1  TCAGAGCTTACAGCAGAAGCCCCTTGGAATTCTGAGTATTCGTCAACTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGCTTACAGCAGAAGCCCCTTGGAATTCTGAGTATTCGTCAACTGT  400

seq1  AGGATGCATTCACGCATGTGCACGTTTAAAATTTTCAAACTCTAAAAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCATTCACGCATGTGCACGTTTAAAATTTTCAAACTCTAAAAGAT  450

seq1  AAAACCCATAAGGTGTTCTCTGACATTGCTCTACGTTGGCATCGGACATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCATAAGGTGTTCTCTGACATTGCTCTACGTTGGCATCGGACATG  500

seq1  GTGTGCACTCTTTACTCAGCATATTCTGCCATTCTAAGTCTTGAACTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCACTCTTTACTCAGCATATTCTGCCATTCTAAGTCTTGAACTCTT  550

seq1  TGGGCATTTTCCCATCTGGAGCTACCTTTTGGTTGGCATTGTAGGTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATTTTCCCATCTGGAGCTACCTTTTGGTTGGCATTGTAGGTTCCA  600

seq1  GATGGATTCTTATGAAGGTTCTAGATTCTGATTTAAAGAATTC  643
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATTCTTATGAAGGTTCTAGATTCTGATTTAAAGAATTC  643