BAC Information

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BAC

Clone NameB6Ng01-132J15
Chromosome1 (Build37)
Map Location 26,612,505 - 26,613,654
singlet/doubletsinglet
Overlap genenone
Upstream geneBai3, LOC665595
Downstream gene4931408C20Rik, LOC677427
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132J15.bB6Ng01-132J15.g
ACCDH933363DH933364
length1,131640
definitionDH933363|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J15, 5' end.DH933364|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatccactacaaaatattccaaaaatattagtgaactaaatatat
gataaaagagttacacactttctgcaacacaggaactagagagtaaaatg
tgtacaactgtaaatatctcccatccttaaattctgcagagctgatttgc
agaaggacatctgggagccagtatcaaggcttcctgtcttccttctggga
aaatgcacagtcatggtacttgggcaggagcatttgtgttttcttcttaa
aagttcccttccaaatatgaagcaagagtcttcagaattcatacctggtg
tttgctagtaaatgagacaagaatgtaaattccaagaccaattcctgata
tataaatatctatgacagatcaaaagagtgatcagtagcaactggccaac
agcagtctagtcaaatcctgatgaacacaaggcaatggctttataaaatt
acaaatctttgggaactgatatgttaatggcttgaaatatcagaaaatga
aatcagattttaaacttatttcaaggtctttctgtactcttatactcatg
tagcctcctggcaatttgacagtgcatttctaacccatattaacattttg
tttaaatgacctttctctgatattttacaaaaaaattgcaacacattatt
tcatattacatatatatatatacatacatatatatacatacatatgtgtg
tatgtgtctatatgtatatatatatatgtgtgtataaacatacatatatt
catttttcttatatgaatttaacatagagaagaacaacaaaatcctgtta
tttacaatttatatagctgtggaattaaggaagatacactaaacagatct
aaaaaatattcttcaagttaaagctaaaaatactttttttcaaataggag
aaaggtagaataaaatgcaagcacattaagatggggtgtgtgcaatagtc
tgtctggagatggttacagttatctccctagtgagatagttttcagacat
agagtttgctctgaaactgactgatgttcacttttagggtatcagcttga
tacttgtgaaaatagattcctccgaatacttttgtatgtcaaagccagat
gtttcatacttaaagctaagctcctgccagt

gaattctttccacttgtcttttctttattgcttctattttcgttttcagg
tcttgaataattttattcatttttttcaaccatttgcattttcttgattt
tctttaagggattcattaatttcttctaattgtttgtgtttccctggata
taaagaattcattcattcatttcatgtaaaggacctttaacatcttcata
aagttggtattaatgtgattttcttatgtttcacctatgttggaatattc
agagtctgctgtattgtgatagctgagttctaatggaaacatattgctct
ggctgttattaaatatgtttttatactggctactattgactgtttttacc
ctggaggttcctgattgtgttcttacagtggcaactaaacatctggattt
gggtttattagcggtctaggagctgcgttaagggtttgttttttgttggg
taggtgttttcttccttgtttcttatctttattttcggtgaatatgatgg
ttgcatgtagcctgtttttgacatgttcatctcttaagctccaagtgacc
atagattggtatttcaggctaaagtactgggaagaattgggagaaaaatg
gtaagatgagaaagttttgttttgttttgttttgttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_26612505_26613654
seq2: B6Ng01-132J15.b_48_1178 (reverse)

seq1  ACTGGCAGGAGCTTAGCCTTTTAAGTTTATGAAACATTCTGGCCTTTGGA  50
      |||||||||||||||||  ||||||  ||||||||| ||||||  || ||
seq2  ACTGGCAGGAGCTTAGC--TTTAAG--TATGAAACA-TCTGGC--TTTGA  43

seq1  CATACAAAAAGTAATTTGGAGGATACTATTATCCACAAGTTATCAAGCTG  100
      ||||| |||||| ||| ||||||  ||||| | |||||| ||||||||||
seq2  CATAC-AAAAGT-ATTCGGAGGAATCTATT-TTCACAAG-TATCAAGCTG  89

seq1  ATAAACCCTAAAAGTGAAACATCAGTCAGTTTCCAGAGCAAACTCTATGT  150
      ||  |||||||||||| ||||||||||||||| |||||||||||||||| 
seq2  AT--ACCCTAAAAGTG-AACATCAGTCAGTTT-CAGAGCAAACTCTATG-  134

seq1  TCTGAAAACTATTCTCACTAGGGAGATAACTGTAACCATCTCCAGACAGA  200
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAACTA-TCTCACTAGGGAGATAACTGTAACCATCTCCAGACAGA  183

seq1  CTATTGCACACACCCCCTTCTTAATGTGCTTGCATTTTATTCTACCTTTC  250
      |||||||||||| |||| ||||||||||||||||||||||||||||||||
seq2  CTATTGCACACA-CCCCATCTTAATGTGCTTGCATTTTATTCTACCTTTC  232

seq1  TCCTATTTTGAAAAAAAGTATTTTTAGCTTTAACTTGAAGAATATTTTTT  300
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTA-TTTGAAAAAAAGTATTTTTAGCTTTAACTTGAAGAATATTTTTT  281

seq1  AGATCTGTTTAGTGTATCTTCCTTAATTCCACAGCTATATAAATTGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTTTAGTGTATCTTCCTTAATTCCACAGCTATATAAATTGTAAA  331

seq1  TAACAGGATTTTGTTGTTCTTCTCTATGTTAAATTCATATAAGAAAAATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGGATTTTGTTGTTCTTCTCTATGTTAAATTCATATAAGAAAAATG  381

seq1  AATATATGTATGTTTATACACACATATATATATATACATATAGACACATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATGTATGTTTATACACACATATATATATATACATATAGACACATA  431

seq1  CACACATATGTATGTATATATATGTATGTATATATATATATGTAATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACATATGTATGTATATATATGTATGTATATATATATATGTAATATGA  481

seq1  AATAATGTGTTGCAATTTTTTTGTAAAATATCAGAGAAAGGTCATTTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTGTTGCAATTTTTTTGTAAAATATCAGAGAAAGGTCATTTAAA  531

seq1  CAAAATGTTAATATGGGTTAGAAATGCACTGTCAAATTGCCAGGAGGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTTAATATGGGTTAGAAATGCACTGTCAAATTGCCAGGAGGCTA  581

seq1  CATGAGTATAAGAGTACAGAAAGACCTTGAAATAAGTTTAAAATCTGATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAGTATAAGAGTACAGAAAGACCTTGAAATAAGTTTAAAATCTGATT  631

seq1  TCATTTTCTGATATTTCAAGCCATTAACATATCAGTTCCCAAAGATTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTCTGATATTTCAAGCCATTAACATATCAGTTCCCAAAGATTTGT  681

seq1  AATTTTATAAAGCCATTGCCTTGTGTTCATCAGGATTTGACTAGACTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTATAAAGCCATTGCCTTGTGTTCATCAGGATTTGACTAGACTGCT  731

seq1  GTTGGCCAGTTGCTACTGATCACTCTTTTGATCTGTCATAGATATTTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCAGTTGCTACTGATCACTCTTTTGATCTGTCATAGATATTTATA  781

seq1  TATCAGGAATTGGTCTTGGAATTTACATTCTTGTCTCATTTACTAGCAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGGAATTGGTCTTGGAATTTACATTCTTGTCTCATTTACTAGCAAA  831

seq1  CACCAGGTATGAATTCTGAAGACTCTTGCTTCATATTTGGAAGGGAACTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGGTATGAATTCTGAAGACTCTTGCTTCATATTTGGAAGGGAACTT  881

seq1  TTAAGAAGAAAACACAAATGCTCCTGCCCAAGTACCATGACTGTGCATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAAGAAAACACAAATGCTCCTGCCCAAGTACCATGACTGTGCATTT  931

seq1  TCCCAGAAGGAAGACAGGAAGCCTTGATACTGGCTCCCAGATGTCCTTCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGAAGGAAGACAGGAAGCCTTGATACTGGCTCCCAGATGTCCTTCT  981

seq1  GCAAATCAGCTCTGCAGAATTTAAGGATGGGAGATATTTACAGTTGTACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATCAGCTCTGCAGAATTTAAGGATGGGAGATATTTACAGTTGTACA  1031

seq1  CATTTTACTCTCTAGTTCCTGTGTTGCAGAAAGTGTGTAACTCTTTTATC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTACTCTCTAGTTCCTGTGTTGCAGAAAGTGTGTAACTCTTTTATC  1081

seq1  ATATATTTAGTTCACTAATATTTTTGGAATATTTTGTAGTGGATGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTAGTTCACTAATATTTTTGGAATATTTTGTAGTGGATGAATTC  1131


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