BAC Information

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BAC

Clone NameB6Ng01-132J16
Chromosome1 (Build37)
Map Location 191,827,616 - 191,999,647
singlet/doubletdoublet
Overlap geneProx1
Upstream geneKctd3, Kcnk2, LOC100042424, LOC100039307, Cenpf, Ptpn14, LOC100042438, Smyd2
Downstream geneLOC100039394, EG666975, Rps6kc1, Angel2, Vash2, LOC100039445, LOC666987, 9630055N22Rik, 1700022P22Rik, Tatdn3, Nsl1, 9130211I03Rik, 4933417M04Rik, Atf3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132J16.bB6Ng01-132J16.g
ACCDH933365DH933366
length1,1311,057
definitionDH933365|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J16, 5' end.DH933366|Mus musculus domesticus DNA, BAC clone: B6Ng01-132J16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(191,827,616 - 191,828,607)(191,998,588 - 191,999,647)
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgtgggat
tgtgggattgtgggattgcaagcttgtacaaccactctggaaatcagtct
agcggttcctcagaaaattggacatagtactaccggaggatcccgtaata
cctctcctgggcatatatccagaagatgtcccaactggtaagaaggacac
atgctctactatgttaatagcagccttatttataatagccagaagctgga
aagaacccagatgcccctcaacagatttatttttatgtatatatgtacat
gtgtgctttgtgactatatgtgtatgtggccatacatgtgtaagaacatg
tagaggccaaaagagagtgtcacaccccctggacctggagttacagatgg
tttgagccactgacatggatggtaggaaccaaactcaggtcctctggaag
agtatcaagtattcttaacctactgagccatctcttcaggcccttaagag
gaaatacctgtactcctgatgcctgaggccagaagagggtgtaggatccc
ctggaactggagtcacagatggttgtgagccaccatgtaggtgctgggaa
ctgaacccaggtcttctacaagagcagccagtgctgtaaccatttgagcg
atgtctttatccagcagttatttttaaaactctactttgcattgtataat
tataagaatgattctagatataaatacatttcaatctgagagttttattc
ctttctgcagatttttacctatggaaggaagaaaaaaaatgaacttcata
atcgtgggatactgagtgttgatccaaactcactctcatgatctagctct
tatcacataccagtggctttcagaaaattagcaatgaaccacagcagcct
ctgaggtcttgtggaagagctgacctgcttaagtttttatctgggaagaa
tgaagccctcccgcaagatgctgtaaatgcg
gaattctccccctggactcagagaccaaaggaaaggagccaggaaaacac
cccaaacccttaaacagcactaggcaagggggcgatcactctgccatccc
ttgctatggcccaacctcttgctagtccctgcaaagtgtccccatctcag
caccagtgtctgcaccagctttggcgcgccacctccgcagcaacaggcgg
gggaggggacatggcggggacagcgcgggcctggcgatggcccacatctc
cctgccgcgtgggacactcgcggcctgggatcaggtggctgccctgttcg
gtccggtgtgcgccgaaccggggcgaaccgagctgaaaggcagcttatgg
ctgctaaggaaggaggcgagggccgcaggacacgggtgggggcaggccag
gcagcgggcaggtggcccggatccctgcacgctcggcggcgaacaagcca
cagcatctatcccccccggcctggatgctgcgaaccaacggagaaggcca
ggcaggagtgaggacagggggcaccgcgtgggagccccgctcgcgcctgg
cgcccgccgaacacactccccgccttccagcccttcccatagtttttcca
gtacagcgggagtgttcctcgcaggctttggaaagccagcaccgaggggg
ctccgactcggagagaggtggccttgggcatgaagacaacagaaggccac
gcggccactctcgtagagcattacaaccctgccaggctggaaagagtggc
ggtgcccagaggcttggcgtgattttgcccactgtgccccgcgtgccgtg
gagtctgctgacacgagcactctcacccaccccactccccgcgcccctgc
ggccggagcctgccttttgtacttcgctgacagcaagactggctgatcac
acccactggtggtggcggcgagtgtgtggttgttgtgtgaggagagggaa
cattccactcctgtgacacttccaagttacggggaagagtccttgttggt
ttctctggagtcctaccgctatctctgaactagggcttttcagttccctg
ttgtgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_191827616_191828607
seq2: B6Ng01-132J16.b_191_1177

seq1  TGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATT  50

seq1  GTGGGATTGTGGGATTGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATTGTGGGATTGTGGGATTGCAAGCTTGTACAACCACTCTGGAAA  100

seq1  TCAGTCTAGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCTAGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCC  150

seq1  CGTAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGA  200

seq1  AGGACACATGCTCTACTATGTTAATAGCAGCCTTATTTATAATAGCCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACACATGCTCTACTATGTTAATAGCAGCCTTATTTATAATAGCCAGA  250

seq1  AGCTGGAAAGAACCCAGATGCCCCTCAACAGATTTATTTTTATGTATATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAAAGAACCCAGATGCCCCTCAACAGATTTATTTTTATGTATATA  300

seq1  TGTACATGTGTGCTTTGTGACTATATGTGTATGTGGCCATACATGTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATGTGTGCTTTGTGACTATATGTGTATGTGGCCATACATGTGTAA  350

seq1  GAACATGTAGAGGCCAAAAGAGAGTGTCACACCCCCTGGACCTGGAGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATGTAGAGGCCAAAAGAGAGTGTCACACCCCCTGGACCTGGAGTTA  400

seq1  CAGATGGTTTGAGCCACTGACATGGATGGTAGGAACCAAACTCAGGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTTGAGCCACTGACATGGATGGTAGGAACCAAACTCAGGTCCT  450

seq1  CTGGAAGAGTATCAAGTATTCTTAACCTACTGAGCCATCTCTTCAGGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAGTATCAAGTATTCTTAACCTACTGAGCCATCTCTTCAGGCCC  500

seq1  TTAAGAGGAAATACCTGTACTCCTGATGCCTGAGGCCAGAAGAGGGTGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGAGGAAATACCTGTACTCCTGATGCCTGAGGCCAGAAGAGGGTGTA  550

seq1  GGATCCCCTGGAACTGGAGTCACAGATGGTTGTGAGCCACCATGTAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCCCTGGAACTGGAGTCACAGATGGTTGTGAGCCACCATGTAGGTG  600

seq1  CTGGGAACTGAACCCAGGTCTTCTACAAGAGCAGCCAGTGCTGTAACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAACTGAACCCAGGTCTTCTACAAGAGCAGCCAGTGCTGTAACCAT  650

seq1  TTGAGCGATGTCTTTATCCAGCAGTTATTTTTAAAACTCTACTTTGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCGATGTCTTTATCCAGCAGTTATTTTTAAAACTCTACTTTGCATT  700

seq1  GTATAATTATAAGAATGATTCTAGATATAAATACATTTCAATCTGAAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTATAATTATAAGAATGATTCTAGATATAAATACATTTCAATCTG-AGAG  749

seq1  TTTTATTCCTTTCTGCAGAATTTTTACCTATGGAAGGAAGAAAAAAAATG  800
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTTTATTCCTTTCTGCAG-ATTTTTACCTATGGAAGGAAGAAAAAAAATG  798

seq1  AACTTCATAATCGTGGGATACTGAGTGTTGATCCAAACTCACTCTCATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCATAATCGTGGGATACTGAGTGTTGATCCAAACTCACTCTCATGA  848

seq1  TCTAAGCATCTTATCACATACCAGTGGCTTCCAGAAAATTAGCAAATGAC  900
      ||| ||| |||||||||||||||||||||| |||||||||||| ||||| 
seq2  TCT-AGC-TCTTATCACATACCAGTGGCTTTCAGAAAATTAGC-AATGAA  895

seq1  ACACAGCAGCCTCTGAGGCCTCTGT-GAAGAGCTGAACTTGCTAAGTTTT  949
       ||||||||||||||||| || ||| |||||||||| ||   ||||||||
seq2  CCACAGCAGCCTCTGAGGTCT-TGTGGAAGAGCTGACCTGCTTAAGTTTT  944

seq1  TAATCTGGGAAAGATGAAGCCCCTCCGCAAGATGCTG-AAATGC  992
      | |||||||||  |||||||||  ||||||||||||| ||||||
seq2  T-ATCTGGGAAGAATGAAGCCCTCCCGCAAGATGCTGTAAATGC  987

seq1: chr1_191998588_191999647
seq2: B6Ng01-132J16.g_66_1122 (reverse)

seq1  TCCACAACAGGGAAACTGGAAGAGCGCTTTGGTCAGAGATAAGCGGTGGG  50
      |||||||||||| |||| ||| ||| | | | |||||||| |||||| ||
seq2  TCCACAACAGGG-AACT-GAAAAGC-CCTAGTTCAGAGAT-AGCGGTAGG  46

seq1  ACTCCTGCGGAGACAAACAGGGTGCTCTTCCCCGT-ACTTGGAGGTGTCA  99
      ||||| |  || || |||| ||  ||||||||||| ||||||| ||||||
seq2  ACTCCAG-AGAAACCAACAAGG-ACTCTTCCCCGTAACTTGGAAGTGTCA  94

seq1  CA-GAGTGGAATGTTCCCTCT-CTCACACACACACCAACACACTCGCCGC  147
      || |||||||||||||||||| |||||||| ||| | |||||||||||||
seq2  CAGGAGTGGAATGTTCCCTCTCCTCACACA-ACAACCACACACTCGCCGC  143

seq1  CACCACCAGTGGGTGTGATCAGCCAGTCTTGCTGTCAGCGAAGTACAAAA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCAGTGGGTGTGATCAGCCAGTCTTGCTGTCAGCGAAGTACAAAA  193

seq1  GGCAGGCTCCGGCCGCAGGGGCGC-GGGAGTGGGGTGGGTGAGAGTGCTC  246
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GGCAGGCTCCGGCCGCAGGGGCGCGGGGAGTGGGGTGGGTGAGAGTGCTC  243

seq1  GTGTCAGCAGACTCCACGGCACGCGGGGCACAGTGGGCAAAATCACGCCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAGCAGACTCCACGGCACGCGGGGCACAGTGGGCAAAATCACGCCA  293

seq1  AGCCTCTGGGCACCGCCACTCTTTCCAGCCTGGCAGGGTTGTAATGCTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGGGCACCGCCACTCTTTCCAGCCTGGCAGGGTTGTAATGCTCT  343

seq1  ACGAGAGTGGCCGCGTGGCCTTCTGTTGTCTTCATGCCCAAGGCCACCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAGAGTGGCCGCGTGGCCTTCTGTTGTCTTCATGCCCAAGGCCACCTC  393

seq1  TCTCCGAGTCGGAGCCCCCTCGGTGCTGGCTTTCCAAAGCCTGCGAGGAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCGAGTCGGAGCCCCCTCGGTGCTGGCTTTCCAAAGCCTGCGAGGAA  443

seq1  CACTCCCGCTGTACTGGAAAAACTATGGGAAGGGCTGGAAGGCGGGGAGT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCGCTGTACTGGAAAAACTATGGGAAGGGCTGGAAGGCGGGGAGT  493

seq1  GTGTTCGGCGGGCGCCAGGCGCGAGCGGGGCTCCCACGCGGTGCCCCCTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCGGCGGGCGCCAGGCGCGAGCGGGGCTCCCACGCGGTGCCCCCTG  543

seq1  TCCTCACTCCTGCCTGGCCTTCTCCGTTGGTTCGCAGCATCCAGGCCGGG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCACTCCTGCCTGGCCTTCTCCGTTGGTTCGCAGCATCCAGGCCGGG  593

seq1  GGGGATAGATGCTGTGGCTTGTTCGCCGCCGAGCGTGCAGGGATCCGGGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATAGATGCTGTGGCTTGTTCGCCGCCGAGCGTGCAGGGATCCGGGC  643

seq1  CACCTGCCCGCTGCCTGGCCTGCCCCCACCCGTGTCCTGCGGCCCTCGCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGCCCGCTGCCTGGCCTGCCCCCACCCGTGTCCTGCGGCCCTCGCC  693

seq1  TCCTTCCTTAGCAGCCATAAGCTGCCTTTCAGCTCGGTTCGCCCCGGTTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCTTAGCAGCCATAAGCTGCCTTTCAGCTCGGTTCGCCCCGGTTC  743

seq1  GGCGCACACCGGACCGAACAGGGCAGCCACCTGATCCCAGGCCGCGAGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGCACACCGGACCGAACAGGGCAGCCACCTGATCCCAGGCCGCGAGTG  793

seq1  TCCCACGCGGCAGGGAGATGTGGGCCATCGCCAGGCCCGCGCTGTCCCCG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGCGGCAGGGAGATGTGGGCCATCGCCAGGCCCGCGCTGTCCCCG  843

seq1  CCATGTCCCCTCCCCCGCCTGTTGCTGCGGAGGTGGCGCGCCAAAGCTGG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTCCCCTCCCCCGCCTGTTGCTGCGGAGGTGGCGCGCCAAAGCTGG  893

seq1  TGCAGACACTGGTGCTGAGATGGGGACACTTTGCAGGGACTAGCAAGAGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGACACTGGTGCTGAGATGGGGACACTTTGCAGGGACTAGCAAGAGG  943

seq1  TTGGGCCATAGCAAGGGATGGCAGAGTGATCGCCCCCTTGCCTAGTGCTG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGCCATAGCAAGGGATGGCAGAGTGATCGCCCCCTTGCCTAGTGCTG  993

seq1  TTTAAGGGTTTGGGGTGTTTTCCTGGCTCCTTTCCTTTGGTCTCTGAGTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGGGTTTGGGGTGTTTTCCTGGCTCCTTTCCTTTGGTCTCTGAGTC  1043

seq1  CAGGGGGAGAATTC  1060
      ||||||||||||||
seq2  CAGGGGGAGAATTC  1057