BAC Information

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BAC

Clone NameB6Ng01-132M24
Chromosome1 (Build37)
Map Location 159,350,760 - 159,483,761
singlet/doubletdoublet
Overlap geneBC026585, Lztr2
Upstream geneSoat1, LOC100039026, Abl2, Tor3a, C530043G21Rik, LOC433368, Ralgps2, Angptl1, 4930439D14Rik, 1700057K13Rik, Rasal2, Gabarapl2-ps1_1522.1, 2810025M15Rik
Downstream geneLOC664935, LOC100039217, 6430517E21Rik, Astn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132M24.bB6Ng01-132M24.g
ACCDH933521DH933522
length1,096410
definitionDH933521|Mus musculus domesticus DNA, BAC clone: B6Ng01-132M24, 5' end.DH933522|Mus musculus domesticus DNA, BAC clone: B6Ng01-132M24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(159,350,760 - 159,351,851)(159,483,346 - 159,483,761)
sequence
gaattcaccactcatgcagtctactactgagtttccactttgttacaaac
attaaaccacttctcgtgattcatagattgacattaccatatgtctcaaa
tgaattgacattgtatagtttcatatatccaatcccacaaaatactgctg
tgtttctctccactgtagctgcttcaagttacaggagcggagtttcttct
tcacaccatgccaatatttagcattatctgcttgaattggctcatttttc
agttttttgagattctcaagattatatggctggccaggcgtggtggtgca
cgcctttaatcccagcacttgggaggcagaggcaggtggatttctgagtt
cgaggccagcctggtctacaaagtgagttccaggacagccagggctatac
agagaaaccctgtctcgaaaaaacaaaaaaaaaaaaaaaaaaaaaagatt
ttatggctggacacatgactcagagcactgatgctcttccagaggtccta
agttcaattcccagcaaccacgtggtggctcacaaccatctgtaatggaa
tccgatgtaatagaatcatatggtgtccataaagacagagtattcacaca
taaaataaataagtcttaaaaagaatatacaagccgggcggtggtggcgc
acacctttaatcccagcacttgggaggcagaggcaggtgaatttctgagt
tccaggccagcctggtctacaaagtgagtgccaggacagccagggctaca
cagagaaaccctgtttcgaaaaaaaaaaaatacatatatatatatatata
tatatacagaaaaacaatccaccttaaaactttaccttttccccttttga
tgtgctctttgtctattcaatattgtctgaattgcctagtcacatttttt
gcagattttttcaatttgcaatttgtctttttctgtgatttatttttttt
aaaaatccccctatttactgactgtggcctaatctcttgggggtttttta
ttattattaccagataataatggtacaaaataatatacttcatttttatt
ttttaaaatgtaatgtaaaaatattgtctccctctacttttactgc
taggagcgcaataccatgactgctcagaaatcacaactattaaggagaaa
gaggtagaaagatccagaacagtgaggaccacccagggtaagattatctg
cttcaactcactctttctccagggctttggggtccttggggggggggggg
aaacaccctgatatgtggctaccagaaaacaagtgactgatgcagaaggt
tccaaagagcttgtgctccaaattaatatattgaagtagtatggaggccc
caaaaagtaggctcctagaataagcccagggctgcccaaaatatactatt
gtaaacttcatttttctatgttatctctggttgtggagctaggctgccac
ccagtggccataagagttcaacacacaccaagagcactaacagcaccaaa
ggccctctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_159350760_159351851
seq2: B6Ng01-132M24.b_50_1145

seq1  GAATTCACCACTCATGCAGTCTACTACTGAGTTTCCACTTTGTTACAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCACTCATGCAGTCTACTACTGAGTTTCCACTTTGTTACAAAC  50

seq1  ATTAAACCACTTCTCGTGATTCATAGATTGACATTACCATATGTCTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACCACTTCTCGTGATTCATAGATTGACATTACCATATGTCTCAAA  100

seq1  TGAATTGACATTGTATAGTTTCATATATCCAATCCCACAAAATACTGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTGACATTGTATAGTTTCATATATCCAATCCCACAAAATACTGCTG  150

seq1  TGTTTCTCTCCACTGTAGCTGCTTCAAGTTACAGGAGCGGAGTTTCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTCCACTGTAGCTGCTTCAAGTTACAGGAGCGGAGTTTCTTCT  200

seq1  TCACACCATGCCAATATTTAGCATTATCTGCTTGAATTGGCTCATTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACCATGCCAATATTTAGCATTATCTGCTTGAATTGGCTCATTTTTC  250

seq1  AGTTTTTTGAGATTCTCAAGATTATATGGCTGGCCAGGCGTGGTGGTGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTTTGAGATTCTCAAGATTATATGGCTGGCCAGGCGTGGTGGTGCA  300

seq1  CGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTT  350

seq1  CGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATAC  400

seq1  AGAGAAACCCTGTCTCGAAAAAACAAAAAAAAAAAAAAAAAAAAAAGATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACCCTGTCTCGAAAAAACAAAAAAAAAAAAAAAAAAAAAAGATT  450

seq1  TTATGGCTGGACACATGACTCAGAGCACTGATGCTCTTCCAGAGGTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCTGGACACATGACTCAGAGCACTGATGCTCTTCCAGAGGTCCTA  500

seq1  AGTTCAATTCCCAGCAACCACGTGGTGGCTCACAACCATCTGTAATGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAATTCCCAGCAACCACGTGGTGGCTCACAACCATCTGTAATGGAA  550

seq1  TCCGATGTAATAGAATCATATGGTGTCCATAAAGACAGAGTATTCACACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATGTAATAGAATCATATGGTGTCCATAAAGACAGAGTATTCACACA  600

seq1  TAAAATAAATAAGTCTTAAAAAGAATATACAAGCCGGGCGGTGGTGGCGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAAATAAGTCTTAAAAAGAATATACAAGCCGGGCGGTGGTGGCGC  650

seq1  ACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGAATTTCTGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGTGAATTTCTGAGT  700

seq1  TCCAGGCCAGCCTGGTCTACAAAGTGAGTGCCAGGACAGCCAGGGCTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCCAGCCTGGTCTACAAAGTGAGTGCCAGGACAGCCAGGGCTACA  750

seq1  CAGAGAAACCCTGTCTCGAAAAAAAAAAAATACATATATATATATATATA  800
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CAGAGAAACCCTGTTTCGAAAAAAAAAAAATACATATATATATATATATA  800

seq1  TATATACAAGAAAAACAATCCACCTTAAAACTTTACC-TTTCCCCTTTTG  849
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  TATATAC-AGAAAAACAATCCACCTTAAAACTTTACCTTTTCCCCTTTTG  849

seq1  ATGTGCTC-TTGTCTATTCAATATTGTCTGAATTGCCTAGTCACATTTTT  898
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCTCTTTGTCTATTCAATATTGTCTGAATTGCCTAGTCACATTTTT  899

seq1  TGCAGATTTTTTTCAATTGCAATTTTGTCTTTTTCTGTGATTTATTTTTT  948
      ||||||||||||  | |||||| |||||||||||||||||||||||||||
seq2  TGCAGATTTTTTCAATTTGCAA-TTTGTCTTTTTCTGTGATTTATTTTTT  948

seq1  TAAAAAAT-CCCCTATATACTGACTGTGGCCTAATCTCTTGGGGG-TTAT  996
      | |||||| ||||||| |||||||||||||||||||||||||||| || |
seq2  TTAAAAATCCCCCTATTTACTGACTGTGGCCTAATCTCTTGGGGGTTTTT  998

seq1  TATTATTATTACCAGATAATAATGGTACAAAATAATATACTTCA-TTTTA  1045
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TATTATTATTACCAGATAATAATGGTACAAAATAATATACTTCATTTTTA  1048

seq1  TTTTTACAAATGT-ATGT-AATATATTGTCTCCCTCTACTTTTTACTGC  1092
      |||||  |||||| |||| || ||||||||||||||||| |||||||||
seq2  TTTTTTAAAATGTAATGTAAAAATATTGTCTCCCTCTAC-TTTTACTGC  1096

seq1: chr1_159483346_159483761
seq2: B6Ng01-132M24.g_65_480 (reverse)

seq1  CCAGAGGGCCTTTGGTGCTGTTAGTGCTCTTGGTGTGTGTTGAACTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCAGAGGGCCTTTGGTGCTGTTAGTGCTCTTGGTGTGTGTTGAACTCTTA  50

seq1  TGGCCACTGGGTGGCAGCCTAGCTCCACAACCAGAGATAACATAGAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCACTGGGTGGCAGCCTAGCTCCACAACCAGAGATAACATAGAAAAA  100

seq1  TGAAGTTTACAATAGTATATTTTGGGCAGCCCTGGGCTTATTCTAGGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTTTACAATAGTATATTTTGGGCAGCCCTGGGCTTATTCTAGGAGC  150

seq1  CTACTTTTTGGGGCCTCCATACTACTTCAATATATTAATTTGGAGCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTTGGGGCCTCCATACTACTTCAATATATTAATTTGGAGCACAA  200

seq1  GCTCTTTGGAACCTTCTGCATCAGTCACTTGTTTTCTGGTAGCCACATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGGAACCTTCTGCATCAGTCACTTGTTTTCTGGTAGCCACATAT  250

seq1  CAGGGTGTTTCCCCCCCCCCCCCAAGGACCCCAAAGCCCTGGAGAAAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGTTTCCCCCCCCCCCCCAAGGACCCCAAAGCCCTGGAGAAAGAG  300

seq1  TGAGTTGAAGCAGATAATCTTACCCTGGGTGGTCCTCACTGTTCTGGATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTGAAGCAGATAATCTTACCCTGGGTGGTCCTCACTGTTCTGGATC  350

seq1  TTTCTACCTCTTTCTCCTTAATAGTTGTGATTTCTGAGCAGTCATGGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACCTCTTTCTCCTTAATAGTTGTGATTTCTGAGCAGTCATGGTAT  400

seq1  TGCGCTCCTAGAATTC  416
      ||||||||||||||||
seq2  TGCGCTCCTAGAATTC  416