BAC Information

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BAC

Clone NameB6Ng01-132O20
Chromosome1 (Build37)
Map Location 154,483,687 - 154,559,906
singlet/doubletdoublet
Overlap genenone
Upstream geneNiban, Edem3, 1700025G04Rik, LOC668076, 5730449L18Rik, Glt25d2, Rgl1
Downstream geneEG639787, Apobec4, Arpc5, Ncf2, Smg7, EG668097, Nmnat2, Lamc2, Lamc1, EG667795, EG626058, 1700012A16Rik, Dhx9, Npl, LOC626096, Rgs8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132O20.bB6Ng01-132O20.g
ACCDH933609DH933610
length1,103972
definitionDH933609|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O20, 5' end.DH933610|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(154,483,687 - 154,484,802)(154,558,928 - 154,559,906)
sequence
gaattccaggacatagtcagcctctctagaaagggtcaaggaaagcactc
cactggggcaggagacagaaaaggcctccgtgaccctttcctcacgccag
ccagttgcggcctgtctctgagaaagaaagggaggaggttttagttgttc
aacttgtcaagacagccagacctatactctagccaatatacccattacac
agaacaaaaatcgatagagattaggagccacttgacaagagtagatcacc
acatctccaagagagggatattagggtcttggattaggtcttgagttgga
ttttaaagggctttgcctaattattacttgaaataaagccttgctgaacc
ctttgctagatatctcagactgagctgagcctcacggctgtgatgcctca
ctcacagtactaatggaggaggggacagtcaagcagagcagtctcttact
gcatgacagaagctgagagaagacttacaggtgccaggcgcaggcccaac
acacagcatttaaagagaattctccagagaaagtgatctttaaggtgaaa
gctgtcttggtgaagcacacttgatgaaaagagggaaggagccaagcaga
tgcatgggacagaacgggagccagcgctctcttctgtggtgggcaccgcc
tagaccactgtgggtctgagcagggcagagaaaggagggttttccccgtc
tcaccacttaagctgagacatcacatataccttctcttgagctcaaactg
gagctacaacccttgttctccctgattctcaggcttttgcgctcagaaag
aattgcactgcctccctcatgcgtccctccttgacagacagcacatcctg
tgacttctcagcatctgtgattggatgagtcaatccttgtaattccatat
aactcttacatacctagtctgcctctcagagaactcagcctgacagcgga
gacaaacatgggaataaatactgtaagcagtttgtatggagccagctacc
ccacatacagtcacagtgctagcgctgtactgtgtctttacaaacgtccc
tcagtctcaggtgggacccagcttggacaagactcagcttcaggaaagcc
tct
gaattctccacaattcccagggccctcctgctcctggggtctatgaatgt
gtgtgtcctgtccaccttttacacggatgttgggggatctgagatcacat
ctcccagtcaaaagaaaatgttggagctgaataagtgctaggcaaatggt
gctaggaggggggggggtctcagcaaagtgagggctccaaagtgctccgc
tggccggttcctatgctgtacagcttgccggttcctaggcctttgggctg
gtagagtgcttgcctgcaagttgctactgtagcagctaagagttatttgg
tgtgtgtactttttattttctcttctcttttaaagtagtccttctttctt
tcttaaatttgtgcagtctgtcatgctgaggtgtcatagaatgtttgcca
taagtggattcttgtagaagggacaaagaggtgaacctttcttttagagt
ggacagttgagccagattgaaactcgagagtggcaccggggatatccagc
ctagctttggggctccctgtttcagacggtgcacagtgttgtggtggcgc
tggatacgtagtttgaatgagagttgagacaggatgcagaagctgggtgc
tgtccagaactgatgagaggacccttaggttgttgacccttagggtcctt
ttggttaaccctttggtttgctctggttcaaatgtacttttatatacctt
tgaaagaataaacttgaatcttggtccagaatcaaattaaaatgtccctt
agagggatgttaagggcataagatgatgtggctgctttcctcatattgtc
tcattagctttttgtttcctggcaacttatttctgcttctctgaatggac
gttgccttggtcatctgccagaactcagctctagatgagaaccagagagc
tcatgtaaagtctggtagggtaagattactctttatttcaagcaccctag
ctgcttccattcatggattcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_154483687_154484802
seq2: B6Ng01-132O20.b_51_1153

seq1  GAATTCCAGGACATAGTCAGCCTCTCTAGAAAGGGTCAAGGAAAGCACTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACATAGTCAGCCTCTCTAGAAAGGGTCAAGGAAAGCACTC  50

seq1  CACTGGGGCAGGAGACAGAAAAGGCCTCCGTGACCCTTTCCTCACGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGGCAGGAGACAGAAAAGGCCTCCGTGACCCTTTCCTCACGCCAG  100

seq1  CCAGTTGCGGCCTGTCTCTGAGAAAGAAAGGGAGGAGGTTTTAGTTGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCGGCCTGTCTCTGAGAAAGAAAGGGAGGAGGTTTTAGTTGTTC  150

seq1  AACTTGTCAAGACAGCCAGACCTATACTCTAGCCAATATACCCATTACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTCAAGACAGCCAGACCTATACTCTAGCCAATATACCCATTACAC  200

seq1  AGAACAAAAATCGATAGAGATTAGGAGCCACTTGACAAGAGTAGATCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAAAAATCGATAGAGATTAGGAGCCACTTGACAAGAGTAGATCACC  250

seq1  ACATCTCCAAGAGAGGGATATTAGGGTCTTGGATTAGGTCTTGAGTTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTCCAAGAGAGGGATATTAGGGTCTTGGATTAGGTCTTGAGTTGGA  300

seq1  TTTTAAAGGGCTTTGCCTAATTATTACTTGAAATAAAGCCTTGCTGAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAGGGCTTTGCCTAATTATTACTTGAAATAAAGCCTTGCTGAACC  350

seq1  CTTTGCTAGATATCTCAGACTGAGCTGAGCCTCACGGCTGTGATGCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTAGATATCTCAGACTGAGCTGAGCCTCACGGCTGTGATGCCTCA  400

seq1  CTCACAGTACTAATGGAGGAGGGGACAGTCAAGCAGAGCAGTCTCTTACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTACTAATGGAGGAGGGGACAGTCAAGCAGAGCAGTCTCTTACT  450

seq1  GCATGACAGAAGCTGAGAGAAGACTTACAGGTGCCAGGCGCAGGCCCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGACAGAAGCTGAGAGAAGACTTACAGGTGCCAGGCGCAGGCCCAAC  500

seq1  ACACAGCATTTAAAGAGAATTCTCCAGAGAAAGTGATCTTTAAGGTGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCATTTAAAGAGAATTCTCCAGAGAAAGTGATCTTTAAGGTGAAA  550

seq1  GCTGTCTTGGTGAAGCACACTTGATGAAAAGAGGGAAGGAGCCAAGCAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTTGGTGAAGCACACTTGATGAAAAGAGGGAAGGAGCCAAGCAGA  600

seq1  TGCATGGGACAGAACGGGAGCCAGCGCTCTCTTCTGTGGTGGGCACCGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGGACAGAACGGGAGCCAGCGCTCTCTTCTGTGGTGGGCACCGCC  650

seq1  TAGACCACTGTGGGTCTGAGCAGGGCAGAGAAAGGAGGGTTTTCCCCGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCACTGTGGGTCTGAGCAGGGCAGAGAAAGGAGGGTTTTCCCCGTC  700

seq1  TCACCACTTAAGCTGAGACATCACATATACCTTCTCTTGAGCTCAAACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACTTAAGCTGAGACATCACATATACCTTCTCTTGAGCTCAAACTG  750

seq1  GAGCTACAACCCTTGTTCTCCCTGATTCTCAGGCTTTTGCGCTCAGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTACAACCCTTGTTCTCCCTGATTCTCAGGCTTTTGCGCTCAGAAAG  800

seq1  AATTGCACTGCCTCCCTCATGCGTCCCTCCTTGACAGACAGCACATCCTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCACTGCCTCCCTCATGCGTCCCTCCTTGACAGACAGCACATCCTG  850

seq1  TGACTTCTCAGCATCTGTGATTGGATGAGTCAATCCTTGTAATTCCATAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTCTCAGCATCTGTGATTGGATGAGTCAATCCTTGTAATTCCATAT  900

seq1  AACTCTTACATACCTAGTTCTGCCTCTCAGGAGAACTCAGCCTGACAGCG  950
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  AACTCTTACATACCTAG-TCTGCCTCTCA-GAGAACTCAGCCTGACAGCG  948

seq1  GAGACAAACATGGGAATAAATACTGTAAGCAGTTTGTATGGAGCCAGCCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  GAGACAAACATGGGAATAAATACTGTAAGCAGTTTGTATGGAGCCAGC--  996

seq1  AACCCCACATTACAGGTCACAGTGCTAGCGCTGTACTGTGTTCCTTTACA  1050
       |||||||| |||| ||||||||||||||||||||||||||  |||||||
seq2  TACCCCACA-TACA-GTCACAGTGCTAGCGCTGTACTGTGT--CTTTACA  1042

seq1  AACGTTCCCTCAGTCTCAGGTGGGACCCAGCTGGGACAAGAACTCAGGCT  1100
      |||| ||||||||||||||||||||||||||| ||||||| ||||| |||
seq2  AACG-TCCCTCAGTCTCAGGTGGGACCCAGCTTGGACAAG-ACTCA-GCT  1089

seq1  TCAAGGAAAAGCCTCT  1116
      |||  | |||||||||
seq2  TCA--GGAAAGCCTCT  1103

seq1: chr1_154558928_154559906
seq2: B6Ng01-132O20.g_67_1038 (reverse)

seq1  CTGCATCCATGAATGGATGCAGCTAGTGTGCTTTGAAATAAAGAGTAATC  50
      ||| ||||||||||||| |||||||| |||| ||||||||||||||||||
seq2  CTGAATCCATGAATGGAAGCAGCTAGGGTGC-TTGAAATAAAGAGTAATC  49

seq1  TTTCCCTTCCCAGACTTCTACATTGAGCTCTCTGGTTCCTCATCTAGAGC  100
      || ||| | |||||||| |||| |||||||||||||| ||||||||||||
seq2  TTACCC-TACCAGACTT-TACA-TGAGCTCTCTGGTT-CTCATCTAGAGC  95

seq1  TGTGTTCTGGGCAGATGACCAGGGCAACGTCCATTCAGAGAAGCAGAAAT  150
      || ||||| |||||||||||| ||||||||||||||||||||||||||||
seq2  TGAGTTCT-GGCAGATGACCAAGGCAACGTCCATTCAGAGAAGCAGAAAT  144

seq1  AAGGTTGCCAAGGAAGCAAAAAGCTAATGAGACAATATTGAGGAAAGCAG  200
      || |||||| ||||| ||||||||||||||||||||| ||||||||||||
seq2  AA-GTTGCC-AGGAAACAAAAAGCTAATGAGACAATA-TGAGGAAAGCAG  191

seq1  CCACATCATCTTATG-CCTTAACATCCCTCTAAGGGACATTTTAATTTGA  249
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CCACATCATCTTATGCCCTTAACATCCCTCTAAGGGACATTTTAATTTGA  241

seq1  TTCTGGACCAAGATTCAAGTTTATTCTTTCAAAGGTATATAAAAGTACAT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACCAAGATTCAAGTTTATTCTTTCAAAGGTATATAAAAGTACAT  291

seq1  TTGAACCAGAGCAAACCAAAGGGTTAACC-AAAGGACCCTAAGGGTCAAC  348
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TTGAACCAGAGCAAACCAAAGGGTTAACCAAAAGGACCCTAAGGGTCAAC  341

seq1  AACCTAAGGGTCCTCTCATCAGTTCTGGACAGCACCCAGCTTCTGCATCC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAAGGGTCCTCTCATCAGTTCTGGACAGCACCCAGCTTCTGCATCC  391

seq1  TGTCTCAACTCTCATTCAAACTACGTATCCAGCGCCACCACAACACTGTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCAACTCTCATTCAAACTACGTATCCAGCGCCACCACAACACTGTG  441

seq1  CACCGTCTGAAACAGGGAGCCCCAAAGCTAGGCTGGATATCCCCGGTGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTCTGAAACAGGGAGCCCCAAAGCTAGGCTGGATATCCCCGGTGCC  491

seq1  ACTCTCGAGTTTCAATCTGGCTCAACTGTCCACTCTAAAAGAAAGGTTCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCGAGTTTCAATCTGGCTCAACTGTCCACTCTAAAAGAAAGGTTCA  541

seq1  CCTCTTTGTCCCTTCTACAAGAATCCACTTATGGCAAACATTCTATGACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTGTCCCTTCTACAAGAATCCACTTATGGCAAACATTCTATGACA  591

seq1  CCTCAGCATGACAGACTGCACAAATTTAAGAAAGAAAGAAGGACTACTTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCATGACAGACTGCACAAATTTAAGAAAGAAAGAAGGACTACTTT  641

seq1  AAAAGAGAAGAGAAAATAAAAAGTACACACACCAAATAACTCTTAGCTGC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGAAGAGAAAATAAAAAGTACACACACCAAATAACTCTTAGCTGC  691

seq1  TACAGTAGCAACTTGCAGGCAAGCACTCTACCAGCCCAAAGGCCTAGGAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTAGCAACTTGCAGGCAAGCACTCTACCAGCCCAAAGGCCTAGGAA  741

seq1  CCGGCAAGCTGTACAGCATAGGAACCGGCCAGCGGAGCACTTTGGAGCCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGCAAGCTGTACAGCATAGGAACCGGCCAGCGGAGCACTTTGGAGCCC  791

seq1  TCACTTTGCTGAGACCCCCCCCCCTCCTAGCACCATTTGCCTAGCACTTA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTTGCTGAGACCCCCCCCCCTCCTAGCACCATTTGCCTAGCACTTA  841

seq1  TTCAGCTCCAACATTTTCTTTTGACTGGGAGATGTGATCTCAGATCCCCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTCCAACATTTTCTTTTGACTGGGAGATGTGATCTCAGATCCCCC  891

seq1  AACATCCGTGTAAAAGGTGGACAGGACACACACATTCATAGACCCCAGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCGTGTAAAAGGTGGACAGGACACACACATTCATAGACCCCAGGA  941

seq1  GCAGGAGGGCCCTGGGAATTGTGGAGAATTC  979
      |||||||||||||||||||||||||||||||
seq2  GCAGGAGGGCCCTGGGAATTGTGGAGAATTC  972